Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc12g0005180 Simmondsia chinensis HOM05D004617 ORTHO05D005531 1.5e-184 649.4 335 100.0
Sc04g0001670 Simmondsia chinensis HOM05D004617 ORTHO05D005531 5.7e-104 381.7 335 61.8
GSVIVG01007687001 Vitis vinifera HOM05D004617 ORTHO05D005531 1.7e-84 317.0 342 52.6
Hund09456 Selenicereus undatus HOM05D004617 ORTHO05D005531 2.3e-81 306.6 330 52.7
Dinv38556 Davidia involucrata HOM05D004617 ORTHO05D005531 1.1e-78 297.7 341 49.3
TAR629G3522 Trochodendron aralioides HOM05D004617 ORTHO05D005531 7.0e-78 295.0 338 51.8
CSS0042906 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 2.0e-77 293.5 343 50.4
CSS0013084 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 1.0e-76 291.2 343 49.6
Rhsim12G0166500 Rhododendron simsii HOM05D004617 ORTHO05D005531 8.6e-76 288.1 383 45.7
Dinv20620 Davidia involucrata HOM05D004617 ORTHO05D005531 7.3e-75 285.0 341 49.0
Nitab4.5_0011992g0040 Nicotiana tabacum HOM05D004617 ORTHO05D005531 1.8e-73 280.4 341 47.8
Nitab4.5_0001284g0070 Nicotiana tabacum HOM05D004617 ORTHO05D005531 5.2e-73 278.9 341 47.2
Cc04_g12560 Coffea canephora HOM05D004617 ORTHO05D005531 7.5e-72 275.0 329 48.9
Sopen03g031610 Solanum pennellii HOM05D004617 ORTHO05D005531 9.9e-72 274.6 340 47.4
Solyc03g112550.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 1.3e-71 274.2 340 47.4
vmacro16629 Vaccinium macrocarpon HOM05D004617 ORTHO05D005531 3.2e-70 269.6 363 45.5
CAN.G338.4 Capsicum annuum HOM05D004617 ORTHO05D005531 4.1e-70 269.2 333 46.8
Ciclev10020950m.g Citrus clementina HOM05D004617 ORTHO05D005531 5.4e-70 268.9 298 51.0
AUR62029851 Chenopodium quinoa HOM05D004617 ORTHO05D005531 7.1e-70 268.5 301 50.5
PGSC0003DMG400018106 Solanum tuberosum HOM05D004617 ORTHO05D005531 1.6e-69 267.3 329 47.4
COL.COLO4_30121 Corchorus olitorius HOM05D004617 ORTHO05D005531 4.6e-69 265.8 303 49.5
Thecc.03G024100 Theobroma cacao HOM05D004617 ORTHO05D005531 4.6e-69 265.8 314 47.5
QL10p008526 Quercus lobata HOM05D004617 ORTHO05D005531 1.0e-68 264.6 324 48.5
Nn4g22667 Nelumbo nucifera HOM05D004617 ORTHO05D005531 1.7e-68 263.8 296 49.0
Haze_07552 Corylus avellana HOM05D004617 ORTHO05D005531 3.0e-68 263.1 361 45.2
Lsat_1_v5_gn_5_15901 Lactuca sativa HOM05D004617 ORTHO05D005531 3.9e-68 262.7 330 46.4
QL10p008663 Quercus lobata HOM05D004617 ORTHO05D005531 6.6e-68 261.9 323 48.3
PGR044G1277 Punica granatum HOM05D004617 ORTHO05D005531 1.5e-67 260.8 341 46.0
EL10Ac5g10692 Beta vulgaris HOM05D004617 ORTHO05D005531 2.5e-67 260.0 260 53.5
Atru.chr9.2539 Acer truncatum HOM05D004617 ORTHO05D005531 3.3e-67 259.6 297 50.2
Duzib205G1820 Durio zibethinus HOM05D004617 ORTHO05D005531 3.3e-67 259.6 315 47.9
MSTRG.23154 Avicennia marina HOM05D004617 ORTHO05D005531 5.6e-67 258.8 297 48.5
Eucgr.K02817 Eucalyptus grandis HOM05D004617 ORTHO05D005531 2.8e-66 256.5 336 46.1
Oeu001681.1 Olea europaea HOM05D004617 ORTHO05D005531 6.2e-66 255.4 296 49.0
Potri.015G080900 Populus trichocarpa HOM05D004617 ORTHO05D005531 6.2e-66 255.4 333 45.3
CiPaw.12G028900 Carya illinoinensis HOM05D004617 ORTHO05D005531 8.1e-66 255.0 342 45.3
Potri.012G088000 Populus trichocarpa HOM05D004617 ORTHO05D005531 8.1e-66 255.0 337 45.7
Migut.O00131 Erythranthe guttata HOM05D004617 ORTHO05D005531 3.1e-65 253.1 297 47.8
Hma1.2p1_0046F.1_g026830 Hydrangea macrophylla HOM05D004617 ORTHO05D005531 3.1e-65 253.1 359 43.5
HanXRQChr05g0154591 Helianthus annuus HOM05D004617 ORTHO05D005531 5.2e-65 252.3 335 45.7
PGSC0003DMG400027080 Solanum tuberosum HOM05D004617 ORTHO05D005531 2.6e-64 250.0 342 43.6
Gohir.A12G272900 Gossypium hirsutum HOM05D004617 ORTHO05D005531 9.9e-64 248.1 315 46.3
Sed0022669 Sechium edule HOM05D004617 ORTHO05D005531 2.9e-63 246.5 341 42.8
TWI39G0523 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 2.9e-63 246.5 286 49.0
DCAR_021575 Daucus carota HOM05D004617 ORTHO05D005531 6.4e-63 245.4 292 47.3
CsaV3_1G001290 Cucumis sativus L. HOM05D004617 ORTHO05D005531 8.4e-63 245.0 339 41.6
Lj9A445T80 Lonicera japonica HOM05D004617 ORTHO05D005531 8.4e-63 245.0 352 41.2
AUR62028750 Chenopodium quinoa HOM05D004617 ORTHO05D005531 1.4e-62 244.2 301 47.2
Gorai.008G294000 Gossypium raimondii HOM05D004617 ORTHO05D005531 1.4e-62 244.2 315 46.0
Sopen06g027890 Solanum pennellii HOM05D004617 ORTHO05D005531 1.9e-62 243.8 337 43.9
Cpa.g.sc153.19 Carica papaya HOM05D004617 ORTHO05D005531 3.2e-62 243.0 297 47.1
ECA246G2887 Erigeron canadensis HOM05D004617 ORTHO05D005531 3.2e-62 243.0 334 44.0
Gohir.D12G273600 Gossypium hirsutum HOM05D004617 ORTHO05D005531 7.1e-62 241.9 315 45.4
MELO3C026277.2 Cucumis melo HOM05D004617 ORTHO05D005531 9.2e-62 241.5 339 41.6
CiPaw.11G022700 Carya illinoinensis HOM05D004617 ORTHO05D005531 1.2e-61 241.1 284 48.6
Solyc06g071600.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 1.6e-61 240.7 333 43.5
AUR62008173 Chenopodium quinoa HOM05D004617 ORTHO05D005531 1.0e-60 238.0 286 47.9
PSO478G3702 Papaver somniferum HOM05D004617 ORTHO05D005531 1.0e-60 238.0 307 43.6
MSTRG.11480 Avicennia marina HOM05D004617 ORTHO05D005531 3.9e-60 236.1 325 43.1
Manes.06G108000 Manihot esculenta HOM05D004617 ORTHO05D005531 5.1e-60 235.7 324 45.1
MD06G1170100 Malus domestica HOM05D004617 ORTHO05D005531 8.7e-60 235.0 343 44.3
MD14G1175700 Malus domestica HOM05D004617 ORTHO05D005531 8.7e-60 235.0 343 44.9
Peaxi162Scf00089g01634 Petunia axillaris HOM05D004617 ORTHO05D005531 3.3e-59 233.0 335 42.7
RcHm_v2.0_Chr7g0193001 Rosa chinensis HOM05D004617 ORTHO05D005531 3.3e-59 233.0 344 43.3
Potri.T124408 Populus trichocarpa HOM05D004617 ORTHO05D005531 4.3e-59 232.6 321 43.9
ClCG06G017200 Citrullus lanatus HOM05D004617 ORTHO05D005531 5.6e-59 232.3 339 40.4
CANSAT80G0933 Cannabis sativa HOM05D004617 ORTHO05D005531 9.6e-59 231.5 333 42.0
Gohir.A09G172500 Gossypium hirsutum HOM05D004617 ORTHO05D005531 2.8e-58 229.9 314 42.7
PSO017G2275 Papaver somniferum HOM05D004617 ORTHO05D005531 4.7e-58 229.2 326 42.0
Gorai.006G189800 Gossypium raimondii HOM05D004617 ORTHO05D005531 4.0e-57 226.1 314 42.7
arahy.Tifrunner.gnm1.ann1.B97T9I Arachis hypogaea HOM05D004617 ORTHO05D005531 9.0e-57 224.9 325 44.3
arahy.Tifrunner.gnm1.ann1.P4R84V Arachis hypogaea HOM05D004617 ORTHO05D005531 9.0e-57 224.9 326 44.2
SGA_v2.0_scaffold90G27877 Striga asiatica HOM05D004617 ORTHO05D005531 1.2e-56 224.6 297 43.4
FAN05G0977 Fragaria x ananassa HOM05D004617 ORTHO05D005531 2.6e-56 223.4 337 42.1
TWI23G0363 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 3.4e-56 223.0 297 45.1
Lalb_Chr23g0273321 Lupinus albus HOM05D004617 ORTHO05D005531 1.7e-55 220.7 317 42.0
FAN13G0632 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.1e-54 218.0 290 42.4
CAN.G993.37 Capsicum annuum HOM05D004617 ORTHO05D005531 1.4e-54 217.6 339 40.7
Lj5A127T55 Lonicera japonica HOM05D004617 ORTHO05D005531 1.9e-54 217.2 287 44.9
Lj4g0013782 Lotus japonicus HOM05D004617 ORTHO05D005531 1.9e-54 217.2 324 42.0
Sabra12G0062800 Salix brachista HOM05D004617 ORTHO05D005531 3.2e-54 216.5 383 38.6
FvH4_5g05820 Fragaria vesca HOM05D004617 ORTHO05D005531 4.2e-54 216.1 294 42.5
Phvul.003G203200 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 4.2e-54 216.1 271 46.1
FvH4_6g24101 Fragaria vesca HOM05D004617 ORTHO05D005531 5.4e-54 215.7 338 40.5
Glyma.05G040000 Glycine max HOM05D004617 ORTHO05D005531 9.3e-54 214.9 323 42.7
FAN18G1615 Fragaria x ananassa HOM05D004617 ORTHO05D005531 3.5e-53 213.0 269 43.1
VMungo1215G2409 Vigna mungo HOM05D004617 ORTHO05D005531 4.6e-53 212.6 322 42.5
FAN08G0972 Fragaria x ananassa HOM05D004617 ORTHO05D005531 6.0e-53 212.2 301 42.5
Aqoxy3G01097 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 3.0e-52 209.9 328 39.3
Phvul.009G175700 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 3.0e-52 209.9 318 39.6
Sabra15G0104900 Salix brachista HOM05D004617 ORTHO05D005531 6.6e-52 208.8 372 37.6
THA.LOC104798968 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 3.3e-51 206.5 297 40.7
TPR.G37539 Trifolium pratense HOM05D004617 ORTHO05D005531 4.3e-51 206.1 279 43.4
THA.LOC104818211 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 2.8e-50 203.4 308 39.9
Psat4g059160 Pisum sativum HOM05D004617 ORTHO05D005531 8.1e-50 201.8 313 40.3
C03p66610 Brassica napus HOM05D004617 ORTHO05D005531 1.8e-49 200.7 311 38.9
CARHR156970 Cardamine hirsuta HOM05D004617 ORTHO05D005531 1.8e-49 200.7 294 39.8
BcaC01g02324 Brassica carinata HOM05D004617 ORTHO05D005531 2.4e-49 200.3 311 38.9
BolC3t18931H Brassica oleracea HOM05D004617 ORTHO05D005531 2.4e-49 200.3 311 38.9
Ca_21946_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 4.0e-49 199.5 342 39.5
Actinidia19118 Actinidia chinensis HOM05D004617 ORTHO05D005531 1.5e-48 197.6 209 49.3
Sp5g13810 Schrenkiella parvula HOM05D004617 ORTHO05D005531 3.4e-48 196.4 286 39.2
Ca_29672_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 7.6e-48 195.3 298 40.6
AL5G27600 Arabidopsis lyrata HOM05D004617 ORTHO05D005531 1.3e-47 194.5 286 39.9
BcaB02g10666 Brassica carinata HOM05D004617 ORTHO05D005531 1.7e-47 194.1 311 39.2
Carub.0005s1437 Capsella rubella HOM05D004617 ORTHO05D005531 1.7e-47 194.1 289 38.8
Thhalv10010559m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 2.9e-47 193.4 307 37.5
VMungo1309G0654 Vigna mungo HOM05D004617 ORTHO05D005531 6.4e-47 192.2 341 36.7
A06p27500 Brassica napus HOM05D004617 ORTHO05D005531 8.4e-47 191.8 312 38.5
Medtr4g105330 Medicago truncatula HOM05D004617 ORTHO05D005531 8.4e-47 191.8 319 40.1
Aa31LG4G16830 Aethionema arabicum HOM05D004617 ORTHO05D005531 1.1e-46 191.4 318 37.7
BraA06t25690Z Brassica rapa HOM05D004617 ORTHO05D005531 1.4e-46 191.0 312 38.5
Prupe.5G169600 Prunus persica HOM05D004617 ORTHO05D005531 1.9e-46 190.7 343 39.1
Nitab4.5_0003918g0030 Nicotiana tabacum HOM05D004617 ORTHO05D005531 2.4e-46 190.3 341 35.8
AT3G48210 Arabidopsis thaliana HOM05D004617 ORTHO05D005531 3.2e-46 189.9 286 39.9
TAR371G0263 Trochodendron aralioides HOM05D004617 ORTHO05D005531 4.2e-46 189.5 217 50.2
Thhalv10010553m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 1.6e-45 187.6 328 36.9
MBI16_g23858_MAGBIO Magnolia biondii HOM05D004617 ORTHO05D005531 2.1e-45 187.2 346 36.7
SalBow5G2990 Salvia bowleyana HOM05D004617 ORTHO05D005531 1.3e-44 184.5 263 42.6
SalBow5G0770 Salvia bowleyana HOM05D004617 ORTHO05D005531 6.7e-44 182.2 220 45.5
DCAR_004467 Daucus carota HOM05D004617 ORTHO05D005531 4.8e-42 176.0 210 46.7
Gohir.D09G168200 Gossypium hirsutum HOM05D004617 ORTHO05D005531 1.4e-41 174.5 314 36.6
unitig_0.g2533 Utricularia gibba HOM05D004617 ORTHO05D005531 2.3e-36 157.1 247 40.1
Cpa.g.sc153.20 Carica papaya HOM05D004617 ORTHO05D005531 3.3e-35 153.3 219 43.8
ATR1152G034 Amborella trichopoda HOM05D004617 ORTHO05D005531 3.1e-33 146.7 300 33.7
HPP92_011588 Vanilla planifolia HOM05D004617 ORTHO05D005531 3.1e-33 146.7 329 32.5
CDE05G2613 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 7.6e-32 142.1 254 34.3
Os05g0110700 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 3.2e-30 136.7 319 31.3
SEGI_25965 Sequoiadendron giganteum HOM05D004617 ORTHO05D005531 1.2e-29 134.8 234 35.9
FAN02G3554 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.8e-28 131.0 164 41.5
Os01g0973200 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 3.0e-28 130.2 302 30.1
Zm00001eb139780 Zea mays HOM05D004617 ORTHO05D005531 4.3e-27 126.3 264 32.6
Psat4g095560 Pisum sativum HOM05D004617 ORTHO05D005531 1.3e-26 124.8 345 30.7
CDE02G4133 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 2.8e-26 123.6 219 37.4
Zm00001eb362200 Zea mays HOM05D004617 ORTHO05D005531 3.7e-26 123.2 314 30.6
Glyma.04G186200 Glycine max HOM05D004617 ORTHO05D005531 2.9e-23 113.6 148 37.8
arahy.Tifrunner.gnm1.ann1.H09BLY Arachis hypogaea HOM05D004617 ORTHO05D005531 4.6e-21 106.3 105 52.4
BcaC07g39309 Brassica carinata HOM05D004617 ORTHO05D005531 5.1e-20 102.8 213 35.2
Glyma.06G179933 Glycine max HOM05D004617 ORTHO05D005531 2.5e-19 100.5 148 36.5
A06p19470 Brassica napus HOM05D004617 ORTHO05D005531 6.9e-17 92.4 277 29.2
BraA06t25026Z Brassica rapa HOM05D004617 ORTHO05D005531 1.5e-16 91.3 260 30.0
Aqoxy5G01948 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 1.0e-15 88.6 199 33.7
Zm00001eb355840 Zea mays HOM05D004617 ORTHO05D005531 8.5e-15 85.5 252 27.0
C08p23230 Brassica napus HOM05D004617 ORTHO05D005531 1.4e-14 84.7 222 29.7
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 3.6e-13 80.1 72 56.9
Atru.chr9.2524 Acer truncatum HOM05D004617 ORTHO05D005531 3.3e-11 73.6 97 45.4
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 6.3e-10 69.3 117 37.6
arahy.Tifrunner.gnm1.ann1.8UC028 Arachis hypogaea HOM05D004617 ORTHO05D005531 1.0e-07 62.0 102 39.2
Glyma.17G086900 Glycine max HOM05D004617 ORTHO05D005531 3.8e-07 60.1 65 46.2


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