Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc12g0004660 Simmondsia chinensis HOM05D004765 ORTHO05D005900 1.8e-276 955.3 480 100.0
Sc12g0004610 Simmondsia chinensis HOM05D004765 ORTHO05D005900 1.0e-255 886.3 479 94.8
Hund20934 Selenicereus undatus HOM05D004765 ORTHO05D005900 4.2e-217 758.1 479 79.5
EL10Ac7g16329 Beta vulgaris HOM05D004765 ORTHO05D005900 3.1e-212 741.9 473 78.6
GSVIVG01036081001 Vitis vinifera HOM05D004765 ORTHO05D005900 1.9e-209 732.6 479 77.2
CSS0013873 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 1.4e-207 726.5 480 76.7
CSS0028820 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 1.4e-207 726.5 480 76.7
Dinv08934 Davidia involucrata HOM05D004765 ORTHO05D005900 7.4e-206 720.7 479 76.0
Dinv22819 Davidia involucrata HOM05D004765 ORTHO05D005900 1.7e-205 719.5 479 76.6
Cfa009988 Carpinus fangiana HOM05D004765 ORTHO05D005900 1.4e-204 716.5 477 75.5
RcHm_v2.0_Chr5g0045881 Rosa chinensis HOM05D004765 ORTHO05D005900 1.8e-204 716.1 479 76.0
Cpa.g.sc195.23 Carica papaya HOM05D004765 ORTHO05D005900 2.4e-204 715.7 479 74.7
Actinidia07259 Actinidia chinensis HOM05D004765 ORTHO05D005900 4.1e-204 714.9 480 76.0
QL01p011857 Quercus lobata HOM05D004765 ORTHO05D005900 2.0e-203 712.6 476 74.6
Thecc.09G278900 Theobroma cacao HOM05D004765 ORTHO05D005900 1.3e-202 709.9 477 74.6
Actinidia24229 Actinidia chinensis HOM05D004765 ORTHO05D005900 1.7e-202 709.5 480 74.6
Prupe.6G135800 Prunus persica HOM05D004765 ORTHO05D005900 1.7e-202 709.5 479 75.6
Ciclev10028115m.g Citrus clementina HOM05D004765 ORTHO05D005900 3.8e-202 708.4 479 74.9
AUR62020257 Chenopodium quinoa HOM05D004765 ORTHO05D005900 6.5e-202 707.6 458 78.4
MD03G1149800 Malus domestica HOM05D004765 ORTHO05D005900 2.5e-201 705.7 479 75.6
Gohir.D05G082500 Gossypium hirsutum HOM05D004765 ORTHO05D005900 4.2e-201 704.9 479 74.5
Gorai.009G084100 Gossypium raimondii HOM05D004765 ORTHO05D005900 9.4e-201 703.7 479 74.3
CSS0015967 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 1.2e-200 703.4 474 74.3
CANSAT54G2137 Cannabis sativa HOM05D004765 ORTHO05D005900 1.6e-200 703.0 485 73.8
CiPaw.14G098100 Carya illinoinensis HOM05D004765 ORTHO05D005900 1.6e-200 703.0 477 73.4
vmacro14340 Vaccinium macrocarpon HOM05D004765 ORTHO05D005900 1.6e-200 703.0 478 74.5
Manes.11G164300 Manihot esculenta HOM05D004765 ORTHO05D005900 6.1e-200 701.0 477 72.7
CSS0022046 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 1.0e-199 700.3 474 73.8
Potri.009G160400 Populus trichocarpa HOM05D004765 ORTHO05D005900 1.8e-199 699.5 480 72.9
MD11G1168600 Malus domestica HOM05D004765 ORTHO05D005900 4.0e-199 698.4 479 74.1
Gohir.A05G079600 Gossypium hirsutum HOM05D004765 ORTHO05D005900 1.2e-198 696.8 479 73.7
Gorai.006G113500 Gossypium raimondii HOM05D004765 ORTHO05D005900 1.5e-198 696.4 477 73.4
Gohir.A09G097000 Gossypium hirsutum HOM05D004765 ORTHO05D005900 2.0e-198 696.0 479 73.3
Gohir.D09G096800 Gossypium hirsutum HOM05D004765 ORTHO05D005900 3.4e-198 695.3 477 73.4
Glyma.12G091700 Glycine max HOM05D004765 ORTHO05D005900 9.7e-198 693.7 477 72.3
FAN16G1441 Fragaria x ananassa HOM05D004765 ORTHO05D005900 1.3e-197 693.3 479 73.7
FAN11G2377 Fragaria x ananassa HOM05D004765 ORTHO05D005900 2.2e-197 692.6 479 73.1
COL.COLO4_34006 Corchorus olitorius HOM05D004765 ORTHO05D005900 1.1e-196 690.3 477 73.2
DCAR_006171 Daucus carota HOM05D004765 ORTHO05D005900 2.4e-196 689.1 479 73.9
PSO801G0028 Papaver somniferum HOM05D004765 ORTHO05D005900 4.1e-196 688.3 480 72.1
PSO339G1244 Papaver somniferum HOM05D004765 ORTHO05D005900 7.0e-196 687.6 480 71.9
Phvul.011G096100 Phaseolus vulgaris HOM05D004765 ORTHO05D005900 7.0e-196 687.6 477 71.5
PGR119G0504 Punica granatum HOM05D004765 ORTHO05D005900 7.0e-196 687.6 474 73.6
arahy.Tifrunner.gnm1.ann1.HXUJ4C Arachis hypogaea HOM05D004765 ORTHO05D005900 9.1e-196 687.2 482 71.6
Sabra09G0125600 Salix brachista HOM05D004765 ORTHO05D005900 1.2e-195 686.8 483 71.6
arahy.Tifrunner.gnm1.ann1.E8Y1JT Arachis hypogaea HOM05D004765 ORTHO05D005900 1.6e-195 686.4 482 71.6
Glyma.11G181400 Glycine max HOM05D004765 ORTHO05D005900 2.0e-195 686.0 477 70.9
Lalb_Chr03g0028231 Lupinus albus HOM05D004765 ORTHO05D005900 2.7e-195 685.6 480 70.8
Rhsim01G0203800 Rhododendron simsii HOM05D004765 ORTHO05D005900 3.5e-195 685.3 514 69.5
Haze_23347 Corylus avellana HOM05D004765 ORTHO05D005900 7.7e-195 684.1 545 65.7
FAN21G2648 Fragaria x ananassa HOM05D004765 ORTHO05D005900 7.7e-195 684.1 494 71.1
Ca_19442_v3 Cicer arietinum L. HOM05D004765 ORTHO05D005900 1.0e-194 683.7 477 71.5
Cc01_g08830 Coffea canephora HOM05D004765 ORTHO05D005900 1.3e-194 683.3 479 72.2
TPR.G17196 Trifolium pratense HOM05D004765 ORTHO05D005900 2.2e-194 682.6 481 70.9
TWI79G1303 Tripterygium wilfordii HOM05D004765 ORTHO05D005900 2.2e-194 682.6 477 71.3
FAN25G0471 Fragaria x ananassa HOM05D004765 ORTHO05D005900 5.0e-194 681.4 502 69.9
TWI31G1403 Tripterygium wilfordii HOM05D004765 ORTHO05D005900 8.5e-194 680.6 477 71.3
Sabra04G0134200 Salix brachista HOM05D004765 ORTHO05D005900 1.9e-193 679.5 475 70.9
Lalb_Chr01g0004931 Lupinus albus HOM05D004765 ORTHO05D005900 2.5e-193 679.1 479 70.8
Potri.004G198200 Populus trichocarpa HOM05D004765 ORTHO05D005900 2.1e-192 676.0 478 70.3
Peaxi162Scf00345g01023 Petunia axillaris HOM05D004765 ORTHO05D005900 4.7e-192 674.9 479 72.4
Lj3g0002417 Lotus japonicus HOM05D004765 ORTHO05D005900 1.8e-191 672.9 477 69.6
ClCG01G011820 Citrullus lanatus HOM05D004765 ORTHO05D005900 5.2e-191 671.4 477 70.9
Medtr4g052530 Medicago truncatula HOM05D004765 ORTHO05D005900 5.2e-191 671.4 497 68.4
Nitab4.5_0003068g0090 Nicotiana tabacum HOM05D004765 ORTHO05D005900 1.5e-190 669.8 478 72.4
Lj1A257T30 Lonicera japonica HOM05D004765 ORTHO05D005900 9.8e-190 667.2 455 74.5
Nitab4.5_0000227g0370 Nicotiana tabacum HOM05D004765 ORTHO05D005900 9.8e-190 667.2 478 72.0
THA.LOC104814781 Tarenaya hassleriana HOM05D004765 ORTHO05D005900 9.8e-190 667.2 475 70.9
MSTRG.18770 Avicennia marina HOM05D004765 ORTHO05D005900 4.8e-189 664.8 479 70.4
Carub.0005s1005 Capsella rubella HOM05D004765 ORTHO05D005900 4.8e-189 664.8 472 71.4
Migut.N02474 Erythranthe guttata HOM05D004765 ORTHO05D005900 1.1e-188 663.7 477 71.3
HanXRQChr11g0343661 Helianthus annuus HOM05D004765 ORTHO05D005900 3.1e-188 662.1 478 70.1
Lsat_1_v5_gn_1_77581 Lactuca sativa HOM05D004765 ORTHO05D005900 3.1e-188 662.1 477 70.2
ECA248G3663 Erigeron canadensis HOM05D004765 ORTHO05D005900 7.0e-188 661.0 480 70.0
AL5G22480 Arabidopsis lyrata HOM05D004765 ORTHO05D005900 9.1e-188 660.6 473 71.0
Nn6g34806 Nelumbo nucifera HOM05D004765 ORTHO05D005900 1.6e-187 659.8 479 71.0
CARHR104550 Cardamine hirsuta HOM05D004765 ORTHO05D005900 2.0e-187 659.4 474 71.1
Sed0019641 Sechium edule HOM05D004765 ORTHO05D005900 3.5e-187 658.7 477 69.8
MELO3C025589.2 Cucumis melo HOM05D004765 ORTHO05D005900 5.9e-187 657.9 477 69.8
Thhalv10010249m.g Eutrema salsugineum HOM05D004765 ORTHO05D005900 1.0e-186 657.1 476 70.8
Sp5g16890 Schrenkiella parvula HOM05D004765 ORTHO05D005900 1.0e-186 657.1 476 70.8
AT3G44330 Arabidopsis thaliana HOM05D004765 ORTHO05D005900 1.7e-186 656.4 473 70.6
HPP92_006357 Vanilla planifolia HOM05D004765 ORTHO05D005900 1.7e-186 656.4 477 67.7
Peaxi162Scf00224g00217 Petunia axillaris HOM05D004765 ORTHO05D005900 2.3e-186 656.0 479 70.4
ATR0081G060 Amborella trichopoda HOM05D004765 ORTHO05D005900 1.1e-185 653.7 481 67.8
CDE08G1681 Ceratophyllum demersum HOM05D004765 ORTHO05D005900 1.1e-185 653.7 457 71.3
Solyc01g009380.3 Solanum lycopersicum HOM05D004765 ORTHO05D005900 1.1e-185 653.7 479 70.6
Eucgr.J00522 Eucalyptus grandis HOM05D004765 ORTHO05D005900 1.5e-185 653.3 453 73.5
HanXRQChr01g0024031 Helianthus annuus HOM05D004765 ORTHO05D005900 1.5e-185 653.3 479 69.3
CsaV3_1G015080 Cucumis sativus L. HOM05D004765 ORTHO05D005900 5.5e-185 651.4 477 69.4
Os08g0102100 Oryza sativa ssp. japonica HOM05D004765 ORTHO05D005900 1.2e-184 650.2 480 66.7
BcaB01g01169 Brassica carinata HOM05D004765 ORTHO05D005900 3.6e-184 648.7 476 68.9
BraA06t25294Z Brassica rapa HOM05D004765 ORTHO05D005900 3.6e-184 648.7 476 69.3
Atru.chr3.3169 Acer truncatum HOM05D004765 ORTHO05D005900 6.8e-183 644.4 461 71.6
BcaC01g02231 Brassica carinata HOM05D004765 ORTHO05D005900 8.9e-183 644.0 475 69.5
A06p26850 Brassica napus HOM05D004765 ORTHO05D005900 1.2e-182 643.7 475 69.3
A06p22050 Brassica napus HOM05D004765 ORTHO05D005900 3.4e-182 642.1 473 68.9
CAN.G745.10 Capsicum annuum HOM05D004765 ORTHO05D005900 3.4e-182 642.1 479 68.7
Duzib170G0619 Durio zibethinus HOM05D004765 ORTHO05D005900 9.8e-182 640.6 479 68.5
Sopen11g027390 Solanum pennellii HOM05D004765 ORTHO05D005900 9.8e-182 640.6 479 69.1
Solyc11g068670.2 Solanum lycopersicum HOM05D004765 ORTHO05D005900 2.2e-181 639.4 479 69.1
C03p69330 Brassica napus HOM05D004765 ORTHO05D005900 2.8e-181 639.0 474 68.6
BolC3t19191H Brassica oleracea HOM05D004765 ORTHO05D005900 2.8e-181 639.0 474 68.6
BcaC01g02031 Brassica carinata HOM05D004765 ORTHO05D005900 8.3e-181 637.5 474 68.4
Nitab4.5_0008177g0070 Nicotiana tabacum HOM05D004765 ORTHO05D005900 4.1e-180 635.2 536 64.4
Aqoxy4G02718 Aquilegia oxysepala HOM05D004765 ORTHO05D005900 1.2e-179 633.6 517 63.1
Aqoxy2G01052 Aquilegia oxysepala HOM05D004765 ORTHO05D005900 2.0e-179 632.9 479 67.0
BcaB02g10755 Brassica carinata HOM05D004765 ORTHO05D005900 2.7e-179 632.5 473 69.1
Aa31LG4G13830 Aethionema arabicum HOM05D004765 ORTHO05D005900 1.7e-178 629.8 453 71.1
SalBow6G2851 Salvia bowleyana HOM05D004765 ORTHO05D005900 2.3e-178 629.4 516 64.9
Nitab4.5_0000731g0090 Nicotiana tabacum HOM05D004765 ORTHO05D005900 8.6e-178 627.5 471 69.4
Zm00001eb259900 Zea mays HOM05D004765 ORTHO05D005900 2.8e-176 622.5 479 64.5
Oeu051604.1 Olea europaea HOM05D004765 ORTHO05D005900 1.0e-175 620.5 474 69.0
SGA_v2.0_scaffold177G39433 Striga asiatica HOM05D004765 ORTHO05D005900 1.3e-173 613.6 477 65.8
Psat7g187280 Pisum sativum HOM05D004765 ORTHO05D005900 1.0e-170 604.0 433 69.5
SGA_v2.0_scaffold295G47508 Striga asiatica HOM05D004765 ORTHO05D005900 4.7e-168 595.1 475 64.2
Duzib168G0312 Durio zibethinus HOM05D004765 ORTHO05D005900 4.4e-166 588.6 477 65.2
CDE02G4012 Ceratophyllum demersum HOM05D004765 ORTHO05D005900 3.1e-159 565.8 480 63.1
unitig_0.g1473 Utricularia gibba HOM05D004765 ORTHO05D005900 2.2e-157 559.7 496 59.9
Zm00001eb198750 Zea mays HOM05D004765 ORTHO05D005900 2.4e-156 556.2 428 63.1
FvH4_3g25670 Fragaria vesca HOM05D004765 ORTHO05D005900 1.2e-155 553.9 394 70.1
Mapoly0185s0020 Marchantia polymorpha HOM05D004765 ORTHO05D005900 1.3e-154 550.4 476 59.0
Pp3c12_11630 Physcomitrium patens HOM05D004765 ORTHO05D005900 5.6e-153 545.0 477 57.4
Migut.D02363 Erythranthe guttata HOM05D004765 ORTHO05D005900 3.2e-148 529.3 392 66.3
SMO141G0161 Selaginella moellendorffii HOM05D004765 ORTHO05D005900 2.6e-142 509.6 487 55.6
Oeu014468.1 Olea europaea HOM05D004765 ORTHO05D005900 3.4e-142 509.2 361 74.0
AUR62001526 Chenopodium quinoa HOM05D004765 ORTHO05D005900 4.9e-141 505.4 338 75.1
VMungo1127G1239 Vigna mungo HOM05D004765 ORTHO05D005900 3.5e-123 446.0 272 80.1
C03p67600 Brassica napus HOM05D004765 ORTHO05D005900 1.1e-111 407.9 317 65.6
CBR_g17963 Chara braunii HOM05D004765 ORTHO05D005900 1.1e-111 407.9 445 49.4
BraA06t25618Z Brassica rapa HOM05D004765 ORTHO05D005900 1.8e-111 407.1 317 65.3
AagrBONN_evm.TU.Sc2ySwM_368.2350 Anthoceros agrestis HOM05D004765 ORTHO05D005900 2.4e-111 406.8 475 45.5
BolSC21t60262H Brassica oleracea HOM05D004765 ORTHO05D005900 1.2e-110 404.4 317 65.3
TAR633G2468 Trochodendron aralioides HOM05D004765 ORTHO05D005900 3.6e-107 392.9 281 70.5
CAN.G226.4 Capsicum annuum HOM05D004765 ORTHO05D005900 6.7e-98 362.1 282 66.3
Sopen01g004890 Solanum pennellii HOM05D004765 ORTHO05D005900 1.1e-84 318.2 245 66.1
SEGI_38882 Sequoiadendron giganteum HOM05D004765 ORTHO05D005900 4.7e-83 312.8 220 69.5
Migut.D02428 Erythranthe guttata HOM05D004765 ORTHO05D005900 6.5e-77 292.4 200 75.5
CAN.G30.1 Capsicum annuum HOM05D004765 ORTHO05D005900 5.9e-70 269.2 194 66.0
SEGI_20304 Sequoiadendron giganteum HOM05D004765 ORTHO05D005900 2.1e-51 207.6 141 72.3
Psat4g157520 Pisum sativum HOM05D004765 ORTHO05D005900 3.7e-48 196.8 195 56.9
CAN.G1211.3 Capsicum annuum HOM05D004765 ORTHO05D005900 1.9e-47 194.5 147 66.0
CAN.G198.33 Capsicum annuum HOM05D004765 ORTHO05D005900 3.2e-47 193.7 152 62.5
CAN.G79.6 Capsicum annuum HOM05D004765 ORTHO05D005900 1.5e-41 174.9 189 52.9
TAR633G0557 Trochodendron aralioides HOM05D004765 ORTHO05D005900 8.4e-32 142.5 91 83.5
CAN.G79.7 Capsicum annuum HOM05D004765 ORTHO05D005900 4.6e-30 136.7 119 59.7
VMungo0251G2550 Vigna mungo HOM05D000107 ORTHO05D000001 1.3e-21 108.6 108 54.6
SEGI_19690 Sequoiadendron giganteum HOM05D004765 ORTHO05D005900 8.7e-21 105.9 89 56.2
Os12g0509400 Oryza sativa ssp. japonica HOM05D004765 ORTHO05D296799 4.0e-10 70.5 55 60.0
Pp3c10_16910 Physcomitrium patens HOM05D004765 ORTHO05D315325 4.2e-07 60.5 113 35.4


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