Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc12g0004150 Simmondsia chinensis HOM05D011877 ORTHO05D010553 3.1e-122 441.8 222 100.0
Nitab4.5_0001453g0080 Nicotiana tabacum HOM05D011877 ORTHO05D010553 1.5e-12 77.4 255 29.8
Thecc.09G291600 Theobroma cacao HOM05D011197 ORTHO05D010553 9.9e-12 74.7 228 29.4
Nitab4.5_0009666g0020 Nicotiana tabacum HOM05D011877 ORTHO05D010553 3.8e-11 72.8 270 28.1
Lj2P994T14 Lonicera japonica HOM05D011877 ORTHO05D010553 1.1e-10 71.2 259 26.3
Lsat_1_v5_gn_2_96940 Lactuca sativa HOM05D011877 ORTHO05D010553 1.4e-10 70.9 247 28.7
Gohir.A05G083700 Gossypium hirsutum HOM05D011197 ORTHO05D010553 1.9e-10 70.5 224 29.9
Gorai.009G088300 Gossypium raimondii HOM05D011197 ORTHO05D010553 7.1e-10 68.6 227 29.5
Gohir.D05G086600 Gossypium hirsutum HOM05D011197 ORTHO05D010553 9.3e-10 68.2 224 29.0
Dinv12524 Davidia involucrata HOM05D011404 ORTHO05D010553 2.7e-09 66.6 178 28.7
Ca_19372_v3 Cicer arietinum L. HOM05D011197 ORTHO05D010553 7.9e-09 65.1 227 27.3
Haze_23449 Corylus avellana HOM05D011404 ORTHO05D010553 7.9e-09 65.1 263 25.1
Sopen06g031020 Solanum pennellii HOM05D011877 ORTHO05D010553 7.9e-09 65.1 227 31.7
PGSC0003DMG400007124 Solanum tuberosum HOM05D011877 ORTHO05D010553 7.9e-09 65.1 219 28.8
Cfa010082 Carpinus fangiana HOM05D011404 ORTHO05D010553 1.0e-08 64.7 258 25.2
Nn6g35047 Nelumbo nucifera HOM05D011404 ORTHO05D010553 1.0e-08 64.7 122 30.3
Manes.04G008500 Manihot esculenta HOM05D011404 ORTHO05D010553 1.3e-08 64.3 269 27.5
Medtr4g055410 Medicago truncatula HOM05D011197 ORTHO05D010553 2.3e-08 63.5 196 27.6
Lj3g0007201 Lotus japonicus HOM05D011197 ORTHO05D010553 3.0e-08 63.2 195 28.7
Solyc06g074550.3 Solanum lycopersicum HOM05D011877 ORTHO05D010553 3.0e-08 63.2 224 31.2
Lsat_1_v5_gn_1_61941 Lactuca sativa HOM05D011877 ORTHO05D010553 6.7e-08 62.0 255 26.3
Nn2g13996 Nelumbo nucifera HOM05D011404 ORTHO05D010553 6.7e-08 62.0 112 30.4
QL01p013727 Quercus lobata HOM05D011404 ORTHO05D010553 1.5e-07 60.8 307 26.7
Oeu050181.1 Olea europaea HOM05D011877 ORTHO05D010553 1.9e-07 60.5 232 27.2
TAR633G2541 Trochodendron aralioides HOM05D011404 ORTHO05D010553 2.5e-07 60.1 184 26.1
HanXRQChr14g0451971 Helianthus annuus HOM05D011877 ORTHO05D010553 3.3e-07 59.7 202 28.2
Peaxi162Scf00789g00061 Petunia axillaris HOM05D011877 ORTHO05D010553 2.1e-06 57.0 242 27.3
TPR.G15575 Trifolium pratense HOM05D011197 ORTHO05D010553 2.1e-06 57.0 196 25.0
TAR623G0178 Trochodendron aralioides HOM05D011404 ORTHO05D010553 2.1e-06 57.0 108 30.6
ATR0820G036 Amborella trichopoda HOM05D024769 ORTHO05D010553 2.8e-06 56.6 100 37.0
Potri.009G149000 Populus trichocarpa HOM05D011404 ORTHO05D010553 4.8e-06 55.8 293 24.6
VMungo1127G2265 Vigna mungo HOM05D011197 ORTHO05D010553 4.8e-06 55.8 204 27.0
Glyma.11G189250 Glycine max HOM05D011197 ORTHO05D010553 8.1e-06 55.1 209 29.2


User provided reference genes

Program Settings