Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc12g0003860 Simmondsia chinensis HOM05D007233 ORTHO05D009043 5.7e-46 187.2 92 100.0
EL10Ac9g21047 Beta vulgaris HOM05D007233 ORTHO05D009043 8.3e-21 103.6 85 62.4
Potri.004G190200 Populus trichocarpa HOM05D007233 ORTHO05D009043 7.0e-20 100.5 80 67.5
GSVIVG01031420001 Vitis vinifera HOM05D007233 ORTHO05D009043 9.1e-20 100.1 80 61.2
Cc01_g10010 Coffea canephora HOM05D007233 ORTHO05D009043 3.5e-19 98.2 89 59.6
Ca_10766_v3 Cicer arietinum L. HOM05D007233 ORTHO05D009043 7.7e-19 97.1 80 61.2
Lj3g0012043 Lotus japonicus HOM05D007233 ORTHO05D009043 1.0e-18 96.7 80 63.8
Thecc.09G294400 Theobroma cacao HOM05D007233 ORTHO05D009043 1.0e-18 96.7 80 62.5
arahy.Tifrunner.gnm1.ann1.5NF9YD Arachis hypogaea HOM05D007233 ORTHO05D009043 2.2e-18 95.5 81 61.7
Lalb_Chr03g0027851 Lupinus albus HOM05D007233 ORTHO05D009043 2.9e-18 95.1 80 58.8
Sabra04G0127900 Salix brachista HOM05D007233 ORTHO05D009043 2.9e-18 95.1 77 66.2
TWI31G0123 Tripterygium wilfordii HOM05D007233 ORTHO05D009043 2.9e-18 95.1 77 64.9
Lsat_1_v5_gn_1_61521 Lactuca sativa HOM05D007233 ORTHO05D009043 3.8e-18 94.7 83 61.4
vmacro03232 Vaccinium macrocarpon HOM05D007233 ORTHO05D009043 3.8e-18 94.7 80 63.8
arahy.Tifrunner.gnm1.ann1.9UEW9D Arachis hypogaea HOM05D007233 ORTHO05D009043 5.0e-18 94.4 81 59.3
HanXRQChr11g0345871 Helianthus annuus HOM05D007233 ORTHO05D009043 5.0e-18 94.4 81 58.0
SalBow3G1176 Salvia bowleyana HOM05D007233 ORTHO05D009043 5.0e-18 94.4 84 60.7
Nitab4.5_0000442g0180 Nicotiana tabacum HOM05D007233 ORTHO05D009043 6.5e-18 94.0 77 64.9
Hund07722 Selenicereus undatus HOM05D007233 ORTHO05D009043 8.5e-18 93.6 83 62.7
Duzib170G0414 Durio zibethinus HOM05D007233 ORTHO05D009043 1.1e-17 93.2 80 60.0
Rhsim13G0103700 Rhododendron simsii HOM05D007233 ORTHO05D009043 1.1e-17 93.2 80 62.5
AL1G18800 Arabidopsis lyrata HOM05D007233 ORTHO05D009043 1.5e-17 92.8 80 55.0
COL.COLO4_31139 Corchorus olitorius HOM05D007233 ORTHO05D009043 1.9e-17 92.4 80 57.5
MSTRG.17742 Avicennia marina HOM05D007233 ORTHO05D009043 4.2e-17 91.3 84 54.8
Ciclev10030019m.g Citrus clementina HOM05D007233 ORTHO05D009043 4.2e-17 91.3 80 58.8
Migut.N02527 Erythranthe guttata HOM05D007233 ORTHO05D009043 5.5e-17 90.9 81 59.3
Solyc11g066690.2 Solanum lycopersicum HOM05D007233 ORTHO05D009043 5.5e-17 90.9 83 57.8
Sopen11g026420 Solanum pennellii HOM05D007233 ORTHO05D009043 5.5e-17 90.9 83 57.8
Manes.04G010800 Manihot esculenta HOM05D007233 ORTHO05D009043 7.2e-17 90.5 80 61.2
QL01p014111 Quercus lobata HOM05D007233 ORTHO05D009043 7.2e-17 90.5 80 61.2
PGSC0003DMG400000464 Solanum tuberosum HOM05D007233 ORTHO05D009043 7.2e-17 90.5 83 56.6
SGA_v2.0_scaffold93G28323 Striga asiatica HOM05D007233 ORTHO05D009043 7.2e-17 90.5 87 55.2
FAN25G1956 Fragaria x ananassa HOM05D007233 ORTHO05D009043 9.5e-17 90.1 80 61.2
TAR369G0714 Trochodendron aralioides HOM05D007233 ORTHO05D009043 9.5e-17 90.1 80 58.8
Cpa.g.sc47.40 Carica papaya HOM05D007233 ORTHO05D009043 1.2e-16 89.7 80 55.0
Carub.0001s0774 Capsella rubella HOM05D007233 ORTHO05D009043 1.6e-16 89.4 80 52.5
AUR62031769 Chenopodium quinoa HOM05D007233 ORTHO05D009043 1.6e-16 89.4 91 56.0
FvH4_3g30010 Fragaria vesca HOM05D007233 ORTHO05D009043 1.6e-16 89.4 80 61.2
FAN21G0394 Fragaria x ananassa HOM05D007233 ORTHO05D009043 1.6e-16 89.4 80 61.2
CSS0019792 Camellia sinensis var. sinensis HOM05D007233 ORTHO05D009043 2.1e-16 89.0 80 61.2
Thhalv10009077m.g Eutrema salsugineum HOM05D007233 ORTHO05D009043 2.1e-16 89.0 80 53.8
ECA248G0451 Erigeron canadensis HOM05D007233 ORTHO05D009043 2.8e-16 88.6 84 57.1
Gohir.D13G228300 Gossypium hirsutum HOM05D007233 ORTHO05D009043 2.8e-16 88.6 80 57.5
VMungo1127G1048 Vigna mungo HOM05D007233 ORTHO05D009043 3.6e-16 88.2 80 58.8
Phvul.011G088600 Phaseolus vulgaris HOM05D007233 ORTHO05D009043 4.7e-16 87.8 80 57.5
AT1G08390 Arabidopsis thaliana HOM05D007233 ORTHO05D009043 6.1e-16 87.4 81 54.3
THA.LOC104826400 Tarenaya hassleriana HOM05D007233 ORTHO05D009043 6.1e-16 87.4 81 53.1
unitig_699.g19183 Utricularia gibba HOM05D007233 ORTHO05D009043 8.0e-16 87.0 83 54.2
Psat0s3169g0040 Pisum sativum HOM05D007233 ORTHO05D009043 1.0e-15 86.7 77 62.3
ClCG01G013980 Citrullus lanatus HOM05D007233 ORTHO05D009043 1.4e-15 86.3 80 56.2
ClCG08G000500 Citrullus lanatus HOM05D007233 ORTHO05D009043 1.4e-15 86.3 80 56.2
Aa31LG1G6480 Aethionema arabicum HOM05D007233 ORTHO05D009043 1.8e-15 85.9 83 50.6
CARHR008260 Cardamine hirsuta HOM05D007233 ORTHO05D009043 1.8e-15 85.9 83 53.0
MELO3C004843.2 Cucumis melo HOM05D007233 ORTHO05D009043 1.8e-15 85.9 80 57.5
Peaxi162Scf00150g00710 Petunia axillaris HOM05D007233 ORTHO05D009043 1.8e-15 85.9 80 55.0
TPR.G32017 Trifolium pratense HOM05D007233 ORTHO05D009043 1.8e-15 85.9 80 58.8
ATR0665G357 Amborella trichopoda HOM05D007233 ORTHO05D009043 2.3e-15 85.5 80 56.2
BcaB07g34087 Brassica carinata HOM05D007233 ORTHO05D009043 2.3e-15 85.5 80 52.5
C05p06530 Brassica napus HOM05D007233 ORTHO05D009043 2.3e-15 85.5 80 52.5
BolC5t29413H Brassica oleracea HOM05D007233 ORTHO05D009043 2.3e-15 85.5 80 52.5
Gorai.013G259000 Gossypium raimondii HOM05D007233 ORTHO05D009043 2.3e-15 85.5 80 56.2
Medtr4g056300 Medicago truncatula HOM05D007233 ORTHO05D009043 2.3e-15 85.5 80 58.8
A06p05410 Brassica napus HOM05D007233 ORTHO05D009043 3.0e-15 85.1 80 52.5
BraA06t23750Z Brassica rapa HOM05D007233 ORTHO05D009043 3.0e-15 85.1 80 52.5
CiPaw.14G104900 Carya illinoinensis HOM05D007233 ORTHO05D009043 3.0e-15 85.1 84 57.1
Sp1g07040 Schrenkiella parvula HOM05D007233 ORTHO05D009043 3.0e-15 85.1 80 52.5
Haze_23494 Corylus avellana HOM05D007233 ORTHO05D009043 4.0e-15 84.7 84 56.0
Prupe.6G116400 Prunus persica HOM05D007233 ORTHO05D009043 6.8e-15 84.0 77 59.7
Aqoxy1G01014 Aquilegia oxysepala HOM05D007233 ORTHO05D009043 8.8e-15 83.6 84 53.6
CsaV3_1G014310 Cucumis sativus L. HOM05D007233 ORTHO05D009043 8.8e-15 83.6 80 56.2
CDE02G1642 Ceratophyllum demersum HOM05D007233 ORTHO05D009043 1.2e-14 83.2 80 55.0
Ah.01g016160 Amaranthus hybridus HOM05D007233 ORTHO05D009043 1.5e-14 82.8 82 52.4
PGR119G2223 Punica granatum HOM05D007233 ORTHO05D009043 2.0e-14 82.4 80 56.2
DCAR_015489 Daucus carota HOM05D007233 ORTHO05D009043 3.4e-14 81.6 78 61.5
Glyma.11G190700 Glycine max HOM05D007233 ORTHO05D009043 3.4e-14 81.6 87 50.6
Sed0016181 Sechium edule HOM05D007233 ORTHO05D009043 5.7e-14 80.9 77 54.5
CAN.G644.46 Capsicum annuum HOM05D007233 ORTHO05D009043 9.8e-14 80.1 83 53.0
MD11G1153700 Malus domestica HOM05D007233 ORTHO05D009043 1.7e-13 79.3 80 55.0
RcHm_v2.0_Chr5g0055931 Rosa chinensis HOM05D007233 ORTHO05D009043 1.7e-13 79.3 80 56.2
Oeu035529.3 Olea europaea HOM05D007233 ORTHO05D009043 2.8e-13 78.6 80 52.5
SHI05395 Sapria himalayana HOM05D007233 ORTHO05D009043 2.8e-13 78.6 80 51.2
Dinv29405 Davidia involucrata HOM05D007233 ORTHO05D009043 1.8e-12 75.9 116 44.0
Gohir.A13G223500 Gossypium hirsutum HOM05D007233 ORTHO05D009043 7.0e-12 73.9 80 53.8
Eucgr.F03331 Eucalyptus grandis HOM05D007233 ORTHO05D009043 9.2e-12 73.6 89 48.3
CANSAT78G0435 Cannabis sativa HOM05D007233 ORTHO05D009043 3.5e-11 71.6 81 49.4
AagrBONN_evm.TU.Sc2ySwM_344.3909 Anthoceros agrestis HOM05D007233 ORTHO05D009043 1.3e-10 69.7 80 45.0
PSO339G4613 Papaver somniferum HOM05D007233 ORTHO05D009043 4.3e-09 64.7 80 46.2
Duzib168G0428 Durio zibethinus HOM05D007233 ORTHO05D009043 7.3e-09 63.9 101 39.6
PSO063G0378 Papaver somniferum HOM05D007233 ORTHO05D009043 4.7e-08 61.2 80 43.8
arahy.Tifrunner.gnm1.ann1.3ZRX2Z Arachis hypogaea HOM05D007233 ORTHO05D009043 6.1e-08 60.8 67 49.3
Zm00001eb053200 Zea mays HOM05D007233 ORTHO05D009043 6.1e-08 60.8 88 43.2
Pp3c26_4940 Physcomitrium patens HOM05D007233 ORTHO05D009043 1.5e-06 56.2 84 39.3
Pp3c26_4950 Physcomitrium patens HOM05D007233 ORTHO05D009043 1.5e-06 56.2 84 39.3


User provided reference genes

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