Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 1.4e-304 1048.9 555 100.0
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 2.8e-164 582.8 511 60.1
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 2.0e-162 576.6 511 59.7
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 5.0e-153 545.4 518 55.2
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 5.5e-152 542.0 518 57.7
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 6.1e-151 538.5 524 54.6
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 3.7e-148 529.3 509 57.8
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 8.5e-145 518.1 508 55.7
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 1.9e-144 516.9 514 54.1
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 2.7e-143 513.1 502 53.8
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 3.4e-138 496.1 514 53.7
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 3.4e-138 496.1 515 54.2
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 4.5e-138 495.7 510 52.0
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 1.0e-137 494.6 546 49.8
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 1.0e-137 494.6 512 52.9
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 2.9e-137 493.0 523 50.9
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 2.5e-136 490.0 550 49.3
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 4.2e-136 489.2 510 52.7
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 2.1e-135 486.9 494 53.4
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 4.7e-135 485.7 510 51.0
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 6.1e-135 485.3 470 57.4
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 8.8e-134 481.5 505 51.5
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 8.8e-134 481.5 514 51.6
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 1.5e-133 480.7 514 51.8
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 4.4e-133 479.2 529 50.9
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 6.3e-132 475.3 512 50.4
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 1.8e-131 473.8 506 52.0
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 2.4e-131 473.4 517 51.8
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.0e-129 468.0 536 50.0
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 1.3e-129 467.6 567 48.0
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 2.2e-129 466.8 514 48.6
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 8.5e-129 464.9 510 49.0
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 1.5e-128 464.2 508 49.0
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 1.5e-128 464.2 509 49.1
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 1.9e-128 463.8 519 50.7
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.9e-128 463.8 544 49.6
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 5.5e-128 462.2 514 50.8
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 1.6e-127 460.7 435 56.6
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 1.6e-127 460.7 506 50.6
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 2.1e-127 460.3 542 49.8
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 2.1e-127 460.3 492 51.6
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 1.4e-126 457.6 514 49.6
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 1.8e-126 457.2 511 51.3
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 3.0e-126 456.4 504 49.6
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 4.0e-126 456.1 510 49.0
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 4.0e-126 456.1 520 47.1
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 6.7e-126 455.3 505 50.3
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 6.7e-126 455.3 472 52.8
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 3.3e-125 453.0 523 50.3
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 1.7e-124 450.7 501 48.1
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 1.7e-124 450.7 508 49.4
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 1.1e-123 448.0 503 48.3
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 9.1e-123 444.9 518 47.9
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 9.1e-123 444.9 512 48.4
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 2.7e-122 443.4 509 47.3
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 3.5e-122 443.0 512 48.0
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 1.0e-121 441.4 516 48.1
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 1.7e-121 440.7 507 49.3
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 5.0e-121 439.1 512 49.0
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 1.5e-120 437.6 513 47.8
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 2.5e-120 436.8 503 47.5
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 3.2e-120 436.4 495 47.9
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 9.4e-120 434.9 525 48.4
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 9.4e-120 434.9 495 48.1
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 2.3e-118 430.3 518 48.3
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 4.0e-118 429.5 553 45.6
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 4.0e-118 429.5 493 49.9
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 1.3e-116 424.5 511 46.2
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 1.3e-116 424.5 499 46.7
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 1.8e-115 420.6 500 48.4
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 9.1e-115 418.3 500 48.0
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 1.2e-114 417.9 457 50.8
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 3.5e-114 416.4 528 45.5
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 4.5e-114 416.0 574 43.0
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 3.8e-113 412.9 503 47.5
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 5.0e-113 412.5 565 42.1
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 1.5e-112 411.0 540 44.1
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 1.2e-111 407.9 452 50.7
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 8.9e-110 401.7 367 56.9
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 1.2e-109 401.4 406 53.0
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 5.7e-109 399.1 396 51.8
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 7.5e-109 398.7 513 46.6
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 7.5e-109 398.7 440 51.6
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 3.7e-108 396.4 495 47.1
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 2.7e-106 390.2 472 48.7
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 2.7e-106 390.2 472 48.7
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 2.5e-104 383.6 511 43.6
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 1.3e-100 371.3 356 57.3
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 1.3e-100 371.3 352 57.7
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 6.4e-100 369.0 430 47.4
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 6.4e-100 369.0 536 43.7
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 4.9e-92 342.8 503 41.0
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 1.6e-87 327.8 428 43.7
Haze_23492 Corylus avellana HOM05D006347 ORTHO05D007835 1.8e-86 324.3 421 46.8
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 2.1e-79 300.8 527 38.9
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 1.8e-78 297.7 527 38.7
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 1.6e-71 274.6 475 40.4
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 4.6e-66 256.5 464 36.4
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 1.3e-63 248.4 551 32.5
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 1.6e-63 248.1 471 35.2
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 1.4e-59 235.0 398 34.2
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 1.9e-59 234.6 310 41.0
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 5.1e-57 226.5 207 54.6
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 4.3e-56 223.4 370 36.8
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.4e-51 208.4 170 60.0
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 8.4e-44 182.6 206 52.9
Ah.01g016190 Amaranthus hybridus HOM05D006347 ORTHO05D007835 1.4e-43 181.8 198 52.0
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 2.7e-42 177.6 252 43.3
Cpa.g.sc47.36 Carica papaya HOM05D006347 ORTHO05D007835 8.7e-41 172.6 211 47.4
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 4.8e-39 166.8 191 46.1
SMO265G0001 Selaginella moellendorffii HOM05D006347 ORTHO05D007835 6.3e-31 139.8 276 33.7
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 1.2e-29 135.6 165 43.0
Hund07723 Selenicereus undatus HOM05D006347 ORTHO05D007835 5.1e-25 120.2 181 43.6
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 9.4e-19 99.4 473 22.8
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 9.7e-16 89.4 86 54.7
Haze_23483 Corylus avellana HOM05D006347 ORTHO05D007835 2.5e-11 74.7 140 38.6
CSS0039987 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 4.2e-11 73.9 65 58.5
SEGI_37044 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 1.4e-09 68.9 89 42.7
SEGI_13685 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 2.3e-09 68.2 132 34.1
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 3.0e-09 67.8 121 36.4
Haze_23490 Corylus avellana HOM05D006347 ORTHO05D007835 3.7e-07 60.8 78 42.3
SEGI_35353 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 6.3e-07 60.1 72 47.2
BolC4t23229H Brassica oleracea HOM05D000452 ORTHO05D005748 8.3e-07 59.7 110 37.3
Actinidia14339 Actinidia chinensis HOM05D006347 ORTHO05D007835 2.4e-06 58.2 59 54.2


User provided reference genes

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