Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc12g0000430 Simmondsia chinensis HOM05D002235 ORTHO05D005799 1.6e-24 115.2 53 100.0
Sc02g0006030 Simmondsia chinensis HOM05D002235 ORTHO05D005799 3.0e-15 84.3 43 88.4
HanXRQChr13g0402731 Helianthus annuus HOM05D002235 ORTHO05D005799 2.5e-14 81.3 43 83.7
Dinv06515 Davidia involucrata HOM05D002235 ORTHO05D005799 4.3e-14 80.5 44 77.3
CSS0009701 Camellia sinensis var. sinensis HOM05D002235 ORTHO05D005799 5.6e-14 80.1 43 81.4
Dinv36089 Davidia involucrata HOM05D000145 ORTHO05D000115 5.6e-14 80.1 43 81.4
ECA233G3712 Erigeron canadensis HOM05D002235 ORTHO05D005799 5.6e-14 80.1 43 81.4
ECA246G1214 Erigeron canadensis HOM05D002235 ORTHO05D005799 5.6e-14 80.1 43 81.4
Hma1.2p1_0224F.1_g094620 Hydrangea macrophylla HOM05D002235 ORTHO05D005799 5.6e-14 80.1 43 81.4
Lsat_1_v5_gn_8_1221 Lactuca sativa HOM05D002235 ORTHO05D005799 5.6e-14 80.1 43 81.4
Lj4C39T5 Lonicera japonica HOM05D002235 ORTHO05D005799 5.6e-14 80.1 43 81.4
Rhsim07G0240400 Rhododendron simsii HOM05D002235 ORTHO05D005799 5.6e-14 80.1 43 81.4
vmacro04531 Vaccinium macrocarpon HOM05D002235 ORTHO05D005799 5.6e-14 80.1 43 81.4
vmacro18282 Vaccinium macrocarpon HOM05D002235 ORTHO05D005799 5.6e-14 80.1 43 81.4
GSVIVG01018954001 Vitis vinifera HOM05D002235 ORTHO05D005799 5.6e-14 80.1 43 81.4
Lj2P905T21 Lonicera japonica HOM05D002235 ORTHO05D005799 7.4e-14 79.7 43 79.1
TAR381G0496 Trochodendron aralioides HOM05D002235 ORTHO05D005799 7.4e-14 79.7 43 79.1
TAR625G0888 Trochodendron aralioides HOM05D002235 ORTHO05D005799 7.4e-14 79.7 43 79.1
Aqoxy6G01121 Aquilegia oxysepala HOM05D002235 ORTHO05D005799 9.6e-14 79.3 43 79.1
Lalb_Chr21g0312921 Lupinus albus HOM05D002235 ORTHO05D005799 9.6e-14 79.3 43 81.4
Nitab4.5_0001323g0110 Nicotiana tabacum HOM05D002235 ORTHO05D005799 9.6e-14 79.3 43 81.4
Nitab4.5_0002927g0020 Nicotiana tabacum HOM05D002235 ORTHO05D005799 9.6e-14 79.3 43 81.4
Rhsim08G0117700 Rhododendron simsii HOM05D002235 ORTHO05D005799 9.6e-14 79.3 43 81.4
Cpa.g.sc903.1 Carica papaya HOM05D002235 ORTHO05D005799 1.6e-13 78.6 43 81.4
Glyma.06G239200 Glycine max HOM05D002235 ORTHO05D005799 1.6e-13 78.6 43 81.4
Glyma.10G197100 Glycine max HOM05D002235 ORTHO05D005799 1.6e-13 78.6 43 81.4
Glyma.20G193100 Glycine max HOM05D002235 ORTHO05D005799 1.6e-13 78.6 43 81.4
Lj2g0003011 Lotus japonicus HOM05D002235 ORTHO05D005799 1.6e-13 78.6 43 79.1
Lj6g0007153 Lotus japonicus HOM05D002235 ORTHO05D005799 1.6e-13 78.6 43 79.1
Medtr1g077690 Medicago truncatula HOM05D002235 ORTHO05D005799 1.6e-13 78.6 43 81.4
Medtr1g090700 Medicago truncatula HOM05D002235 ORTHO05D005799 1.6e-13 78.6 43 81.4
Psat6g053600 Pisum sativum HOM05D002235 ORTHO05D005799 1.6e-13 78.6 43 81.4
Psat6g172680 Pisum sativum HOM05D002235 ORTHO05D005799 1.6e-13 78.6 43 81.4
TPR.G34817 Trifolium pratense HOM05D002235 ORTHO05D005799 1.6e-13 78.6 43 81.4
TPR.G37795 Trifolium pratense HOM05D002235 ORTHO05D005799 1.6e-13 78.6 43 81.4
CANSAT35G1638 Cannabis sativa HOM05D002235 ORTHO05D005799 2.1e-13 78.2 43 79.1
Ca_10444_v3 Cicer arietinum L. HOM05D006212 ORTHO05D008245 2.1e-13 78.2 40 85.0
Lsat_1_v5_gn_6_22200 Lactuca sativa HOM05D002235 ORTHO05D005799 2.1e-13 78.2 43 81.4
Lalb_Chr06g0169911 Lupinus albus HOM05D002235 ORTHO05D005799 2.1e-13 78.2 42 83.3
Nitab4.5_0000434g0210 Nicotiana tabacum HOM05D002235 ORTHO05D005799 2.1e-13 78.2 43 79.1
PSO017G6094 Papaver somniferum HOM05D002235 ORTHO05D005799 2.1e-13 78.2 43 79.1
PSO675G3787 Papaver somniferum HOM05D002235 ORTHO05D005799 2.1e-13 78.2 43 79.1
PGR044G0255 Punica granatum HOM05D002235 ORTHO05D005799 2.1e-13 78.2 43 79.1
VMungo0720G2086 Vigna mungo HOM05D002235 ORTHO05D005799 2.1e-13 78.2 43 81.4
CAN.G358.94 Capsicum annuum HOM05D002235 ORTHO05D005799 2.8e-13 77.8 43 76.7
CiPaw.02G018100 Carya illinoinensis HOM05D002235 ORTHO05D005799 2.8e-13 77.8 43 79.1
Haze_25325 Corylus avellana HOM05D002235 ORTHO05D005799 2.8e-13 77.8 43 79.1
Solyc02g085280.1 Solanum lycopersicum HOM05D002235 ORTHO05D005799 2.8e-13 77.8 43 76.7
Sopen02g029970 Solanum pennellii HOM05D002235 ORTHO05D005799 2.8e-13 77.8 43 76.7
PGSC0003DMG400003504 Solanum tuberosum HOM05D002235 ORTHO05D005799 2.8e-13 77.8 43 76.7
Cfa021431 Carpinus fangiana HOM05D002235 ORTHO05D005799 3.7e-13 77.4 43 76.7
Haze_03086 Corylus avellana HOM05D002235 ORTHO05D005799 3.7e-13 77.4 43 76.7
Duzib151G0490 Durio zibethinus HOM05D002235 ORTHO05D005799 3.7e-13 77.4 43 76.7
Duzib212G0828 Durio zibethinus HOM05D002235 ORTHO05D005799 3.7e-13 77.4 43 76.7
Gohir.A09G206400 Gossypium hirsutum HOM05D002235 ORTHO05D005799 3.7e-13 77.4 43 76.7
Phvul.007G139500 Phaseolus vulgaris HOM05D002235 ORTHO05D005799 3.7e-13 77.4 43 79.1
Thecc.04G195100 Theobroma cacao HOM05D002235 ORTHO05D005799 3.7e-13 77.4 43 76.7
CAN.G760.13 Capsicum annuum HOM05D002235 ORTHO05D005799 4.8e-13 77.0 43 76.7
DCAR_025940 Daucus carota HOM05D002235 ORTHO05D005799 4.8e-13 77.0 43 76.7
Duzib212G0763 Durio zibethinus HOM05D002235 ORTHO05D005799 4.8e-13 77.0 43 74.4
Nn5g29623 Nelumbo nucifera HOM05D002235 ORTHO05D005799 4.8e-13 77.0 43 79.1
Nitab4.5_0001385g0100 Nicotiana tabacum HOM05D002235 ORTHO05D005799 4.8e-13 77.0 43 76.7
PSO210G5099 Papaver somniferum HOM05D002235 ORTHO05D005799 4.8e-13 77.0 43 76.7
HPP92_026358 Vanilla planifolia HOM05D002235 ORTHO05D005799 4.8e-13 77.0 42 81.0
Atru.chr3.580 Acer truncatum HOM05D002235 ORTHO05D005799 6.2e-13 76.6 43 76.7
Gorai.006G223700 Gossypium raimondii HOM05D002235 ORTHO05D005799 6.2e-13 76.6 42 78.6
Lsat_1_v5_gn_9_50621 Lactuca sativa HOM05D002235 ORTHO05D005799 6.2e-13 76.6 43 79.1
Manes.15G096200 Manihot esculenta HOM05D002235 ORTHO05D005799 6.2e-13 76.6 43 76.7
Aa31LG8G15630 Aethionema arabicum HOM05D002235 ORTHO05D005799 8.1e-13 76.3 43 76.7
BcaB03g16642 Brassica carinata HOM05D002235 ORTHO05D005799 8.1e-13 76.3 43 76.7
BcaC01g06895 Brassica carinata HOM05D002235 ORTHO05D005799 8.1e-13 76.3 43 76.7
BcaC06g36406 Brassica carinata HOM05D002235 ORTHO05D005799 8.1e-13 76.3 43 76.7
A06p33230 Brassica napus HOM05D002235 ORTHO05D005799 8.1e-13 76.3 43 76.7
A07p02340 Brassica napus HOM05D002235 ORTHO05D005799 8.1e-13 76.3 43 76.7
C07p04460 Brassica napus HOM05D002235 ORTHO05D005799 8.1e-13 76.3 43 76.7
BolC3t18178H Brassica oleracea HOM05D002235 ORTHO05D005799 8.1e-13 76.3 43 76.7
BolC7t40841H Brassica oleracea HOM05D002235 ORTHO05D005799 8.1e-13 76.3 43 76.7
BraA06t26254Z Brassica rapa HOM05D002235 ORTHO05D005799 8.1e-13 76.3 43 76.7
BraA07t28025Z Brassica rapa HOM05D002235 ORTHO05D005799 8.1e-13 76.3 43 76.7
ClCG01G019570 Citrullus lanatus HOM05D002235 ORTHO05D005799 8.1e-13 76.3 43 76.7
Cc07_g09520 Coffea canephora HOM05D002235 ORTHO05D005799 8.1e-13 76.3 43 76.7
CsaV3_6G046250 Cucumis sativus L. HOM05D002235 ORTHO05D005799 8.1e-13 76.3 43 76.7
Eucgr.H01271 Eucalyptus grandis HOM05D002235 ORTHO05D005799 8.1e-13 76.3 43 76.7
Thhalv10022927m.g Eutrema salsugineum HOM05D002235 ORTHO05D005799 8.1e-13 76.3 43 76.7
THA.LOC109117197 Tarenaya hassleriana HOM05D002235 ORTHO05D005799 8.1e-13 76.3 43 76.7
TWI73G0456 Tripterygium wilfordii HOM05D002235 ORTHO05D005799 8.1e-13 76.3 43 76.7
AL3G51680 Arabidopsis lyrata HOM05D002235 ORTHO05D005799 1.1e-12 75.9 43 76.7
AT2G18400 Arabidopsis thaliana HOM05D002235 ORTHO05D005799 1.1e-12 75.9 43 76.7
C03p59220 Brassica napus HOM05D002235 ORTHO05D005799 1.1e-12 75.9 43 74.4
Carub.0003s3255 Capsella rubella HOM05D002235 ORTHO05D005799 1.1e-12 75.9 43 76.7
COL.COLO4_20230 Corchorus olitorius HOM05D002235 ORTHO05D005799 1.4e-12 75.5 43 74.4
Gohir.D09G200000 Gossypium hirsutum HOM05D002235 ORTHO05D005799 1.4e-12 75.5 42 76.2
Oeu033800.1 Olea europaea HOM05D002235 ORTHO05D005799 1.4e-12 75.5 43 74.4
Oeu042402.1 Olea europaea HOM05D002235 ORTHO05D005799 1.4e-12 75.5 43 74.4
Sp3g31810 Schrenkiella parvula HOM05D002235 ORTHO05D005799 1.4e-12 75.5 43 76.7
SpUn0030_0020 Schrenkiella parvula HOM05D002235 ORTHO05D005799 1.4e-12 75.5 43 76.7
SGA_v2.0_scaffold111G31410 Striga asiatica HOM05D002235 ORTHO05D005799 1.4e-12 75.5 43 76.7
MSTRG.23525 Avicennia marina HOM05D002235 ORTHO05D005799 1.8e-12 75.1 43 74.4
RcHm_v2.0_Chr6g0274821 Rosa chinensis HOM05D002235 ORTHO05D005799 1.8e-12 75.1 43 74.4
Sed0025608 Sechium edule HOM05D002235 ORTHO05D005799 1.8e-12 75.1 43 74.4
Prupe.7G092200 Prunus persica HOM05D002235 ORTHO05D005799 2.4e-12 74.7 43 74.4
QL02p021739 Quercus lobata HOM05D002235 ORTHO05D005799 2.4e-12 74.7 43 76.7
QL06p046214 Quercus lobata HOM05D002235 ORTHO05D005799 2.4e-12 74.7 43 76.7
MD05G1029600 Malus domestica HOM05D002235 ORTHO05D005799 3.1e-12 74.3 43 74.4
MD10G1030300 Malus domestica HOM05D002235 ORTHO05D005799 3.1e-12 74.3 43 74.4
RcHm_v2.0_Chr7g0241841 Rosa chinensis HOM05D002235 ORTHO05D005799 3.1e-12 74.3 43 74.4
SalBow5G5593 Salvia bowleyana HOM05D002235 ORTHO05D005799 3.1e-12 74.3 43 74.4
TWI09G1408 Tripterygium wilfordii HOM05D002235 ORTHO05D005799 3.1e-12 74.3 43 74.4
ATR0584G171 Amborella trichopoda HOM05D002235 ORTHO05D005799 4.0e-12 73.9 43 76.7
MELO3C007828.2 Cucumis melo HOM05D002235 ORTHO05D005799 4.0e-12 73.9 43 74.4
Os03g0725000 Oryza sativa ssp. japonica HOM05D002235 ORTHO05D005799 4.0e-12 73.9 40 77.5
Peaxi162Scf00941g00017 Petunia axillaris HOM05D002235 ORTHO05D005799 4.0e-12 73.9 43 74.4
Potri.007G024900 Populus trichocarpa HOM05D002235 ORTHO05D005799 4.0e-12 73.9 43 74.4
Sabra07G0022000 Salix brachista HOM05D002235 ORTHO05D005799 4.0e-12 73.9 43 74.4
SHI22885 Sapria himalayana HOM05D002235 ORTHO05D005799 4.0e-12 73.9 43 72.1
CiPaw.01G039500 Carya illinoinensis HOM05D002235 ORTHO05D005799 5.3e-12 73.6 43 74.4
MBI01_g12898_MAGBIO Magnolia biondii HOM05D002235 ORTHO05D005799 5.3e-12 73.6 43 76.7
Peaxi162Scf00751g00024 Petunia axillaris HOM05D002235 ORTHO05D005799 5.3e-12 73.6 42 73.8
unitig_748.g8520 Utricularia gibba HOM05D002235 ORTHO05D005799 5.3e-12 73.6 40 82.5
CARHR109000 Cardamine hirsuta HOM05D002235 ORTHO05D005799 6.9e-12 73.2 43 72.1
FvH4_2g13340 Fragaria vesca HOM05D002235 ORTHO05D005799 6.9e-12 73.2 43 74.4
FAN15G2152 Fragaria x ananassa HOM05D002235 ORTHO05D005799 6.9e-12 73.2 43 74.4
FAN20G0632 Fragaria x ananassa HOM05D002235 ORTHO05D005799 6.9e-12 73.2 43 74.4
FAN27G3347 Fragaria x ananassa HOM05D002235 ORTHO05D005799 6.9e-12 73.2 43 74.4
Nitab4.5_0003232g0050 Nicotiana tabacum HOM05D002235 ORTHO05D005799 6.9e-12 73.2 43 69.8
Ah.08g210610 Amaranthus hybridus HOM05D000444 ORTHO05D000489 1.2e-11 72.4 42 76.2
FAN04G2216 Fragaria x ananassa HOM05D002235 ORTHO05D005799 2.0e-11 71.6 43 69.8
Lsat_1_v5_gn_1_45121 Lactuca sativa HOM05D002235 ORTHO05D005799 2.0e-11 71.6 39 76.9
Migut.H00992 Erythranthe guttata HOM05D002235 ORTHO05D005799 3.4e-11 70.9 43 72.1
Migut.M00148 Erythranthe guttata HOM05D002235 ORTHO05D005799 3.4e-11 70.9 43 72.1
FAN08G1141 Fragaria x ananassa HOM05D002235 ORTHO05D005799 3.4e-11 70.9 43 69.8
FvH4_5g39530 Fragaria vesca HOM05D002235 ORTHO05D005799 7.6e-11 69.7 43 69.8
FAN18G0133 Fragaria x ananassa HOM05D002235 ORTHO05D005799 7.6e-11 69.7 43 69.8
FAN18G2999 Fragaria x ananassa HOM05D002235 ORTHO05D005799 7.6e-11 69.7 43 69.8
FAN24G1704 Fragaria x ananassa HOM05D002235 ORTHO05D005799 7.6e-11 69.7 39 76.9
AUR62028534 Chenopodium quinoa HOM05D002235 ORTHO05D005799 2.2e-10 68.2 43 69.8
EL10Ac3g05244 Beta vulgaris HOM05D002235 ORTHO05D005799 3.8e-10 67.4 40 72.5
EL10Ac7g16923 Beta vulgaris HOM05D002235 ORTHO05D005799 3.8e-10 67.4 40 72.5
Os08g0484301 Oryza sativa ssp. japonica HOM05D002235 ORTHO05D005799 4.9e-10 67.0 40 72.5
TAR626G0470 Trochodendron aralioides HOM05D002235 ORTHO05D005799 6.4e-10 66.6 43 67.4
AUR62008275 Chenopodium quinoa HOM05D002235 ORTHO05D005799 8.4e-10 66.2 43 72.1
Mapoly0157s0015 Marchantia polymorpha HOM05D002235 ORTHO05D005799 8.4e-10 66.2 42 66.7
Mapoly0252s0007 Marchantia polymorpha HOM05D002235 ORTHO05D005799 8.4e-10 66.2 42 66.7
Ciclev10017281m.g Citrus clementina HOM05D002235 ORTHO05D005799 1.4e-09 65.5 43 62.8
AUR62031034 Chenopodium quinoa HOM05D002235 ORTHO05D005799 2.4e-09 64.7 43 69.8
ATR0307G016 Amborella trichopoda HOM05D002235 ORTHO05D005799 3.5e-08 60.8 37 73.0
AUR62008274 Chenopodium quinoa HOM05D002235 ORTHO05D005799 4.6e-08 60.5 43 67.4
THA.LOC109116243 Tarenaya hassleriana HOM05D002235 ORTHO05D005799 7.9e-08 59.7 35 74.3
Pp3c15_6870 Physcomitrium patens HOM05D002235 ORTHO05D005799 1.8e-07 58.5 39 61.5
Aqoxy5G01622 Aquilegia oxysepala HOM05D002235 ORTHO05D005799 3.9e-07 57.4 28 82.1
CDE05G3036 Ceratophyllum demersum HOM05D000163 ORTHO05D000219 7.4e-06 53.1 34 67.6
Pp3c2_23440 Physcomitrium patens HOM05D002235 ORTHO05D005799 9.6e-06 52.8 32 62.5


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