Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 6.1e-66 254.2 148 100.0
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 3.4e-32 142.1 146 63.0
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 3.6e-26 122.1 145 53.8
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 8.0e-26 120.9 142 53.5
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 2.3e-25 119.4 141 58.2
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 3.1e-25 119.0 150 59.3
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 5.2e-25 118.2 143 48.3
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 8.9e-25 117.5 145 48.3
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 2.6e-24 115.9 108 62.0
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 2.6e-24 115.9 142 48.6
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 3.4e-24 115.5 143 48.3
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 4.4e-24 115.2 142 47.9
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 5.8e-24 114.8 112 58.9
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 5.8e-24 114.8 151 51.7
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 5.8e-24 114.8 98 63.3
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 9.8e-24 114.0 140 48.6
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 1.7e-23 113.2 104 56.7
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 1.7e-23 113.2 95 61.1
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 2.2e-23 112.8 141 49.6
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 2.2e-23 112.8 105 61.0
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 2.2e-23 112.8 99 61.6
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 2.2e-23 112.8 145 46.2
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 3.7e-23 112.1 103 60.2
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 4.9e-23 111.7 142 54.2
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 1.1e-22 110.5 145 51.7
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 4.1e-22 108.6 103 59.2
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 4.1e-22 108.6 96 59.4
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 4.1e-22 108.6 104 55.8
Hund16629 Selenicereus undatus HOM05D007629 ORTHO05D009511 5.4e-22 108.2 133 57.1
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 7.0e-22 107.8 138 47.8
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 9.2e-22 107.5 103 58.3
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 2.1e-21 106.3 104 57.7
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 2.1e-21 106.3 147 46.3
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 2.7e-21 105.9 98 59.2
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 6.0e-21 104.8 144 46.5
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 6.0e-21 104.8 93 59.1
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 7.8e-21 104.4 100 58.0
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 7.8e-21 104.4 144 46.5
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 2.3e-20 102.8 104 55.8
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 2.3e-20 102.8 99 58.6
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 3.0e-20 102.4 95 57.9
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 6.6e-20 101.3 110 52.7
Gohir.A08G053900 Gossypium hirsutum HOM05D007629 ORTHO05D009511 1.1e-19 100.5 116 50.9
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 1.5e-19 100.1 104 54.8
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 1.5e-19 100.1 105 55.2
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 2.5e-19 99.4 142 51.4
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 3.3e-19 99.0 157 44.6
Gohir.D08G063600 Gossypium hirsutum HOM05D007629 ORTHO05D009511 7.3e-19 97.8 114 50.0
Gorai.004G065600 Gossypium raimondii HOM05D007629 ORTHO05D009511 7.3e-19 97.8 114 50.0
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 2.1e-18 96.3 143 46.9
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 2.1e-18 96.3 108 53.7
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 2.8e-18 95.9 152 46.7
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 8.1e-18 94.4 158 43.7
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 1.1e-17 94.0 147 44.2
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 1.4e-17 93.6 99 52.5
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 1.8e-17 93.2 114 51.8
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 2.3e-17 92.8 136 47.8
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 2.3e-17 92.8 154 44.8
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 2.3e-17 92.8 88 56.8
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 4.0e-17 92.0 97 54.6
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 1.5e-16 90.1 121 47.9
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.5e-16 90.1 154 44.2
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 5.8e-16 88.2 155 43.2
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 5.8e-16 88.2 102 49.0
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 7.5e-16 87.8 153 43.8
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 1.3e-15 87.0 99 56.6
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 6.4e-15 84.7 122 46.7
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 4.1e-14 82.0 149 42.3
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 4.1e-14 82.0 118 45.8
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 5.4e-14 81.6 146 41.1
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 1.2e-13 80.5 100 54.0
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 2.1e-13 79.7 83 54.2
AUR62023067 Chenopodium quinoa HOM05D007629 ORTHO05D009511 2.1e-13 79.7 145 43.4
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 4.6e-13 78.6 112 50.9
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 6.0e-13 78.2 112 50.9
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 7.8e-13 77.8 128 46.1
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 1.0e-12 77.4 100 53.0
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 2.3e-12 76.3 107 52.3
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 2.3e-12 76.3 188 39.4
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 2.3e-12 76.3 188 39.4
CDE10G0639 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 3.9e-12 75.5 106 47.2
Prupe.2G013500 Prunus persica HOM05D007629 ORTHO05D009511 5.1e-12 75.1 153 37.3
Sp1g06620 Schrenkiella parvula HOM05D007629 ORTHO05D009511 5.1e-12 75.1 102 50.0
Ah.10g038830 Amaranthus hybridus HOM05D007629 ORTHO05D009511 6.6e-12 74.7 142 41.5
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 8.6e-12 74.3 100 52.0
CDE10G1066 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.1e-11 73.9 129 39.5
BraA08t35446Z Brassica rapa HOM05D000280 ORTHO05D000632 2.5e-11 72.8 104 50.0
Thhalv10009537m.g Eutrema salsugineum HOM05D007629 ORTHO05D009511 2.5e-11 72.8 105 47.6
Carub.0001s0734 Capsella rubella HOM05D007629 ORTHO05D009511 5.6e-11 71.6 104 50.0
BcaB03g13359 Brassica carinata HOM05D007629 ORTHO05D009511 7.3e-11 71.2 112 44.6
CARHR007770 Cardamine hirsuta HOM05D007629 ORTHO05D009511 7.3e-11 71.2 105 47.6
CDE05G0903 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.6e-10 70.1 103 46.6
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 2.8e-10 69.3 134 45.5
BraA09t41945Z Brassica rapa HOM05D001466 ORTHO05D001452 1.8e-09 66.6 112 43.8
A09p66070 Brassica napus HOM05D001466 ORTHO05D001452 2.4e-09 66.2 112 43.8
CDE05G1807 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 2.4e-09 66.2 104 43.3
BcaC07g42509 Brassica carinata HOM05D007629 ORTHO05D009511 1.5e-08 63.5 108 39.8
CDE05G3301 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.5e-08 63.5 94 45.7
C08p50220 Brassica napus HOM05D001466 ORTHO05D001452 1.1e-06 57.4 107 43.0
HPP92_009584 Vanilla planifolia HOM05D007629 ORTHO05D009511 1.1e-06 57.4 135 35.6
Zm00001eb033200 Zea mays HOM05D064474 ORTHO05D009511 1.4e-06 57.0 156 38.5
SEGI_12647 Sequoiadendron giganteum HOM05D057847 ORTHO05D009511 3.2e-06 55.8 110 30.9
SEGI_40980 Sequoiadendron giganteum HOM05D057847 ORTHO05D009511 3.2e-06 55.8 110 30.9
Peaxi162Scf00953g00011 Petunia axillaris HOM05D007629 ORTHO05D009511 9.2e-06 54.3 78 41.0


User provided reference genes

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