Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 1.1e-60 236.5 123 100.0
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 9.6e-49 196.8 123 83.7
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 8.4e-45 183.7 111 86.5
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 3.2e-44 181.8 123 77.2
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 4.2e-44 181.4 120 78.3
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 1.6e-43 179.5 123 77.2
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 2.1e-43 179.1 112 80.4
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 2.1e-43 179.1 112 80.4
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 2.7e-43 178.7 116 75.9
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 2.7e-43 178.7 120 76.7
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 2.7e-43 178.7 116 77.6
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 4.6e-43 177.9 120 74.2
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 6.0e-43 177.6 113 79.6
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 6.0e-43 177.6 120 76.7
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 1.0e-42 176.8 112 80.4
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 1.8e-42 176.0 119 75.6
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 2.3e-42 175.6 112 77.7
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 2.3e-42 175.6 112 77.7
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 2.3e-42 175.6 111 78.4
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 3.0e-42 175.3 119 74.8
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 5.1e-42 174.5 109 80.7
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 5.1e-42 174.5 116 74.1
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 8.7e-42 173.7 113 77.0
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 8.7e-42 173.7 113 77.0
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 1.1e-41 173.3 112 76.8
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 1.1e-41 173.3 120 73.3
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 1.5e-41 172.9 109 78.9
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 1.5e-41 172.9 118 73.7
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 1.5e-41 172.9 109 78.0
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 2.5e-41 172.2 120 72.5
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 9.6e-41 170.2 111 77.5
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 9.6e-41 170.2 111 77.5
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 9.6e-41 170.2 111 77.5
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 1.3e-40 169.9 119 73.1
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 1.3e-40 169.9 111 76.6
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 1.3e-40 169.9 117 72.6
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 1.6e-40 169.5 119 71.4
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 2.8e-40 168.7 119 72.3
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 3.7e-40 168.3 114 72.8
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 3.7e-40 168.3 123 76.4
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 8.1e-40 167.2 122 71.3
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 8.1e-40 167.2 115 72.2
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 8.1e-40 167.2 114 75.4
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 1.1e-39 166.8 116 74.1
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 1.4e-39 166.4 123 73.2
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 1.8e-39 166.0 114 72.8
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 3.1e-39 165.2 114 74.6
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 4.0e-39 164.9 108 75.0
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 5.3e-39 164.5 116 74.1
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 5.3e-39 164.5 116 74.1
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 6.9e-39 164.1 113 73.5
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 6.9e-39 164.1 117 70.1
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 1.5e-38 162.9 111 73.0
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 1.5e-38 162.9 110 72.7
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 2.0e-38 162.5 111 75.7
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 2.6e-38 162.2 111 74.8
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 3.4e-38 161.8 115 69.6
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 3.4e-38 161.8 109 72.5
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 3.4e-38 161.8 108 75.0
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 9.9e-38 160.2 120 68.3
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 2.2e-37 159.1 113 67.3
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 2.2e-37 159.1 111 73.0
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 2.2e-37 159.1 108 75.0
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 8.4e-37 157.1 111 71.2
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 8.4e-37 157.1 109 71.6
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 8.4e-37 157.1 109 69.7
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 1.1e-36 156.8 109 70.6
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 1.4e-36 156.4 120 70.0
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 4.2e-36 154.8 119 66.4
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 5.5e-36 154.5 113 67.3
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 2.7e-35 152.1 111 70.3
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 2.3e-34 149.1 120 60.8
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 3.0e-34 148.7 108 73.1
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 6.7e-34 147.5 106 67.0
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.1e-33 146.7 101 72.3
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 1.5e-33 146.4 102 72.5
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 9.6e-33 143.7 104 65.4
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 9.6e-33 143.7 104 64.4
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 2.1e-32 142.5 104 64.4
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 6.2e-32 141.0 108 64.8
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 8.2e-32 140.6 113 65.5
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 8.2e-32 140.6 112 64.3
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 1.1e-31 140.2 94 72.3
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.1e-31 138.7 99 69.7
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 2.6e-30 135.6 113 62.8
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 7.6e-30 134.0 110 60.0
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 8.4e-29 130.6 78 84.6
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 3.2e-28 128.6 117 59.8
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 1.6e-27 126.3 121 55.4
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 2.7e-27 125.6 120 59.2
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 3.5e-27 125.2 114 57.9
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 6.0e-27 124.4 75 81.3
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 1.8e-26 122.9 120 55.8
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 3.9e-26 121.7 77 76.6
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 6.7e-26 120.9 118 55.1
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 3.3e-25 118.6 93 64.5
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.3e-24 116.7 75 76.0
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.3e-24 116.7 75 76.0
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 3.7e-24 115.2 119 52.1
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 4.8e-24 114.8 119 51.3
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 1.4e-23 113.2 86 67.4
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.8e-23 112.8 113 55.8
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 1.8e-23 112.8 113 55.8
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 1.5e-22 109.8 88 63.6
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.6e-22 109.0 113 54.0
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 2.6e-22 109.0 105 48.6
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 7.6e-22 107.5 110 50.9
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 5.0e-21 104.8 110 49.1
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 6.5e-21 104.4 110 48.2
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 8.5e-21 104.0 73 68.5
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 8.5e-21 104.0 81 65.4
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 8.5e-21 104.0 73 68.5
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 1.4e-20 103.2 106 49.1
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 1.9e-20 102.8 71 69.0
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 1.9e-20 102.8 71 69.0
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 2.5e-20 102.4 68 76.5
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 4.2e-20 101.7 110 47.3
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 4.2e-20 101.7 73 65.8
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 4.2e-20 101.7 93 58.1
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 1.6e-19 99.8 90 62.2
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 3.6e-19 98.6 107 47.7
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 6.1e-19 97.8 111 45.0
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 2.3e-18 95.9 59 79.7
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.3e-18 95.9 59 79.7
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 3.7e-16 88.6 99 43.4
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 7.7e-14 80.9 78 48.7
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 1.0e-10 70.5 62 59.7
FAN03G1360 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.0e-09 66.2 47 66.0
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 9.7e-09 63.9 43 72.1
FAN06G1951 Fragaria x ananassa HOM05D006288 ORTHO05D007416 7.0e-07 57.8 101 39.6


User provided reference genes

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