Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0008720 Simmondsia chinensis HOM05D007258 ORTHO05D008852 1.8e-102 375.9 194 100.0
Hund16216 Selenicereus undatus HOM05D007258 ORTHO05D008852 2.2e-79 299.3 192 82.8
AUR62009496 Chenopodium quinoa HOM05D007258 ORTHO05D008852 1.2e-74 283.5 176 76.7
Duzib138G1000 Durio zibethinus HOM05D007258 ORTHO05D008852 4.7e-74 281.6 177 78.0
Thecc.04G103600 Theobroma cacao HOM05D007258 ORTHO05D008852 1.0e-73 280.4 173 78.6
CiPaw.03G085000 Carya illinoinensis HOM05D007258 ORTHO05D008852 1.4e-73 280.0 172 78.5
Hma1.2p1_0069F.1_g037420 Hydrangea macrophylla HOM05D007258 ORTHO05D008852 1.5e-72 276.6 176 75.6
CAN.G497.87 Capsicum annuum HOM05D007258 ORTHO05D008852 1.3e-71 273.5 174 75.9
Gorai.001G208500 Gossypium raimondii HOM05D007258 ORTHO05D008852 1.7e-71 273.1 173 76.3
Nitab4.5_0009044g0050 Nicotiana tabacum HOM05D007258 ORTHO05D008852 4.8e-71 271.6 174 75.9
SGA_v2.0_scaffold148G36428 Striga asiatica HOM05D003455 ORTHO05D004165 8.2e-71 270.8 174 74.7
QL02p066408 Quercus lobata HOM05D007258 ORTHO05D008852 1.4e-70 270.0 173 77.5
Gohir.D07G187600 Gossypium hirsutum HOM05D007258 ORTHO05D008852 3.1e-70 268.9 173 75.1
PGR004G1744 Punica granatum HOM05D007258 ORTHO05D008852 4.1e-70 268.5 169 75.7
Haze_25378 Corylus avellana HOM05D007258 ORTHO05D008852 5.3e-70 268.1 173 75.7
CANSAT64G1331 Cannabis sativa HOM05D007258 ORTHO05D008852 1.2e-69 266.9 172 76.2
Nn4g23475 Nelumbo nucifera HOM05D007258 ORTHO05D008852 2.7e-69 265.8 176 73.3
Cpa.g.sc14.201 Carica papaya HOM05D007258 ORTHO05D008852 3.5e-69 265.4 167 75.4
Potri.004G116800 Populus trichocarpa HOM05D007258 ORTHO05D008852 7.7e-69 264.2 173 72.8
Manes.02G057800 Manihot esculenta HOM05D007258 ORTHO05D008852 1.0e-68 263.8 176 73.9
Rhsim08G0075900 Rhododendron simsii HOM05D007258 ORTHO05D008852 2.2e-68 262.7 177 74.6
Phvul.004G041100 Phaseolus vulgaris HOM05D007258 ORTHO05D008852 1.5e-67 260.0 172 73.8
EL10Ac2g04457 Beta vulgaris HOM05D007258 ORTHO05D008852 1.9e-67 259.6 201 68.2
VMungo0464G1058 Vigna mungo HOM05D007258 ORTHO05D008852 1.9e-67 259.6 172 73.3
CSS0017666 Camellia sinensis var. sinensis HOM05D007258 ORTHO05D008852 3.2e-67 258.8 176 72.2
Lalb_Chr21g0318311 Lupinus albus HOM05D007258 ORTHO05D008852 5.5e-67 258.1 171 73.7
Ciclev10012686m.g Citrus clementina HOM05D007258 ORTHO05D008852 1.6e-66 256.5 172 70.9
Glyma.13G053500 Glycine max HOM05D007258 ORTHO05D008852 1.6e-66 256.5 172 73.3
MELO3C022042.2 Cucumis melo HOM05D007258 ORTHO05D008852 3.6e-66 255.4 175 71.4
Sopen02g033890 Solanum pennellii HOM05D007258 ORTHO05D008852 3.6e-66 255.4 174 71.3
Sabra04G0070300 Salix brachista HOM05D000830 ORTHO05D008852 4.7e-66 255.0 173 70.5
PGSC0003DMG400001370 Solanum tuberosum HOM05D007258 ORTHO05D008852 6.1e-66 254.6 172 72.1
THA.LOC104802980 Tarenaya hassleriana HOM05D007258 ORTHO05D008852 8.0e-66 254.2 173 72.3
CsaV3_5G038620 Cucumis sativus L. HOM05D007258 ORTHO05D008852 3.0e-65 252.3 174 70.7
arahy.Tifrunner.gnm1.ann1.GI8EHX Arachis hypogaea HOM05D007258 ORTHO05D008852 1.2e-64 250.4 171 71.3
Medtr6g015855 Medicago truncatula HOM05D007258 ORTHO05D008852 1.5e-64 250.0 172 72.7
arahy.Tifrunner.gnm1.ann1.TJ02B2 Arachis hypogaea HOM05D007258 ORTHO05D008852 2.0e-64 249.6 171 71.3
TPR.G4313 Trifolium pratense HOM05D007258 ORTHO05D008852 3.4e-64 248.8 172 72.7
Cc07_g04400 Coffea canephora HOM05D007258 ORTHO05D008852 4.4e-64 248.4 174 71.3
Solyc02g089100.3 Solanum lycopersicum HOM05D007258 ORTHO05D008852 5.7e-64 248.1 168 72.0
Psat1g066400 Pisum sativum HOM05D007258 ORTHO05D008852 1.3e-63 246.9 172 72.1
Lj2g0017705 Lotus japonicus HOM05D007258 ORTHO05D008852 2.2e-63 246.1 176 69.9
unitig_32.g11768 Utricularia gibba HOM05D007258 ORTHO05D008852 2.2e-63 246.1 176 66.5
Aqoxy3G00517 Aquilegia oxysepala HOM05D007258 ORTHO05D008852 4.8e-63 245.0 177 68.4
MSTRG.15441 Avicennia marina HOM05D007258 ORTHO05D008852 8.3e-63 244.2 152 79.6
TWI34G1392 Tripterygium wilfordii HOM05D007258 ORTHO05D008852 8.3e-63 244.2 171 70.2
Lsat_1_v5_gn_4_173160 Lactuca sativa HOM05D007258 ORTHO05D008852 1.4e-62 243.4 174 66.1
COL.COLO4_03895 Corchorus olitorius HOM05D007258 ORTHO05D008852 3.1e-62 242.3 137 82.5
HanXRQChr09g0264921 Helianthus annuus HOM05D007258 ORTHO05D008852 4.1e-62 241.9 178 66.9
HPP92_001847 Vanilla planifolia HOM05D007258 ORTHO05D008852 4.1e-62 241.9 150 76.7
ECA232G3790 Erigeron canadensis HOM05D007258 ORTHO05D008852 9.1e-62 240.7 174 65.5
MD17G1063700 Malus domestica HOM05D007258 ORTHO05D008852 1.2e-61 240.4 169 68.0
GSVIVG01036568001 Vitis vinifera HOM05D007258 ORTHO05D008852 1.2e-61 240.4 173 68.8
Prupe.3G250800 Prunus persica HOM05D007258 ORTHO05D008852 1.6e-61 240.0 167 68.3
Migut.K01261 Erythranthe guttata HOM05D007258 ORTHO05D008852 5.9e-61 238.0 175 64.6
Glyma.19G033200 Glycine max HOM05D007258 ORTHO05D008852 1.7e-60 236.5 157 72.0
Aa31LG5G12750 Aethionema arabicum HOM05D007258 ORTHO05D008852 2.2e-60 236.1 177 66.7
AL3G11470 Arabidopsis lyrata HOM05D007258 ORTHO05D008852 3.8e-60 235.3 176 67.6
Carub.0003s0134 Capsella rubella HOM05D007258 ORTHO05D008852 6.5e-60 234.6 176 67.0
Ca_20770_v3 Cicer arietinum L. HOM05D000600 ORTHO05D000432 8.5e-60 234.2 173 67.6
BcaC05g30334 Brassica carinata HOM05D007258 ORTHO05D008852 1.1e-59 233.8 178 66.3
Gohir.A07G181100 Gossypium hirsutum HOM05D007258 ORTHO05D008852 1.5e-59 233.4 173 66.5
PSO017G7301 Papaver somniferum HOM05D007258 ORTHO05D008852 1.5e-59 233.4 166 66.3
Thhalv10021265m.g Eutrema salsugineum HOM05D007258 ORTHO05D008852 2.5e-59 232.6 177 66.7
AT3G02220 Arabidopsis thaliana HOM05D007258 ORTHO05D008852 5.5e-59 231.5 176 66.5
BcaC05g30335 Brassica carinata HOM05D007258 ORTHO05D008852 5.5e-59 231.5 176 66.5
A05p45100 Brassica napus HOM05D007258 ORTHO05D008852 5.5e-59 231.5 176 66.5
C09p75600 Brassica napus HOM05D007258 ORTHO05D008852 5.5e-59 231.5 176 66.5
BolC5t35098H Brassica oleracea HOM05D007258 ORTHO05D008852 5.5e-59 231.5 176 66.5
BraA05t23151Z Brassica rapa HOM05D007258 ORTHO05D008852 5.5e-59 231.5 176 66.5
MD17G1063100 Malus domestica HOM05D007258 ORTHO05D008852 5.5e-59 231.5 178 64.6
Sp3g01290 Schrenkiella parvula HOM05D007258 ORTHO05D008852 7.2e-59 231.1 177 67.2
CARHR076190 Cardamine hirsuta HOM05D007258 ORTHO05D008852 2.1e-58 229.6 170 67.1
Oeu004419.1 Olea europaea HOM05D007258 ORTHO05D008852 2.1e-58 229.6 137 79.6
PSO478G0672 Papaver somniferum HOM05D007258 ORTHO05D008852 2.1e-58 229.6 166 65.1
Os01g0763000 Oryza sativa ssp. japonica HOM05D007258 ORTHO05D008852 4.7e-58 228.4 172 62.8
Haze_03284 Corylus avellana HOM05D007258 ORTHO05D008852 8.0e-58 227.6 154 72.7
Sed0003620 Sechium edule HOM05D007258 ORTHO05D008852 1.0e-57 227.3 175 65.7
Cfa010690 Carpinus fangiana HOM05D007258 ORTHO05D008852 1.8e-57 226.5 136 79.4
Eucgr.L02288 Eucalyptus grandis HOM05D007258 ORTHO05D008852 8.8e-57 224.2 193 60.6
RcHm_v2.0_Chr2g0165201 Rosa chinensis HOM05D007258 ORTHO05D008852 3.7e-55 218.8 169 63.9
TAR374G0815 Trochodendron aralioides HOM05D007258 ORTHO05D008852 1.8e-54 216.5 150 69.3
FvH4_6g46551 Fragaria vesca HOM05D007258 ORTHO05D008852 2.0e-53 213.0 167 63.5
FAN05G4223 Fragaria x ananassa HOM05D000830 ORTHO05D008852 2.0e-53 213.0 167 63.5
FAN02G1393 Fragaria x ananassa HOM05D000830 ORTHO05D008852 2.7e-53 212.6 161 65.2
FAN14G1076 Fragaria x ananassa HOM05D000830 ORTHO05D008852 1.5e-51 206.8 182 58.8
SEGI_41097 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 5.6e-51 204.9 147 68.7
CDE07G1188 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 9.5e-51 204.1 151 63.6
Zm00001eb152360 Zea mays HOM05D007258 ORTHO05D008852 9.5e-51 204.1 133 67.7
Eucgr.I02051 Eucalyptus grandis HOM05D007258 ORTHO05D008852 1.6e-50 203.4 155 65.8
Haze_14398 Corylus avellana HOM05D000041 ORTHO05D000061 5.2e-49 198.4 149 67.1
Nitab4.5_0005120g0080 Nicotiana tabacum HOM05D007258 ORTHO05D008852 8.6e-44 181.0 192 54.7
Pp3c24_10 Physcomitrium patens HOM05D007258 ORTHO05D008852 1.5e-43 180.3 145 62.1
MD17G1063300 Malus domestica HOM05D007258 ORTHO05D008852 7.3e-43 177.9 113 70.8
FAN09G2101 Fragaria x ananassa HOM05D000830 ORTHO05D008852 7.5e-40 167.9 138 62.3
MD09G1072600 Malus domestica HOM05D007258 ORTHO05D008852 1.3e-39 167.2 166 51.2
Actinidia17595 Actinidia chinensis HOM05D007258 ORTHO05D008852 8.3e-39 164.5 179 51.4
CDE04G0513 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 1.1e-35 154.1 153 53.6
CBR_g1012 Chara braunii HOM05D007258 ORTHO05D008852 1.4e-30 137.1 143 49.7
Atru.BG.153.p Acer truncatum HOM05D007258 ORTHO05D008852 1.6e-29 133.7 82 72.0
AagrBONN_evm.TU.Sc2ySwM_117.3322 Anthoceros agrestis HOM05D007258 ORTHO05D008852 2.7e-29 132.9 153 50.3
vmacro18138 Vaccinium macrocarpon HOM05D007258 ORTHO05D008852 9.5e-27 124.4 91 72.5
ClCG11G004890 Citrullus lanatus HOM05D007258 ORTHO05D008852 1.6e-26 123.6 68 77.9
BcaB03g16148 Brassica carinata HOM05D007258 ORTHO05D008852 1.3e-20 104.0 82 59.8
Actinidia26259 Actinidia chinensis HOM05D007258 ORTHO05D008852 1.7e-20 103.6 79 72.2
SEGI_23358 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 2.1e-18 96.7 79 64.6
Lsat_1_v5_gn_4_141000 Lactuca sativa HOM05D007258 ORTHO05D008852 7.6e-16 88.2 67 58.2
ATR0037G029 Amborella trichopoda HOM05D007258 ORTHO05D008852 2.9e-15 86.3 102 52.0
ATR0037G004 Amborella trichopoda HOM05D007258 ORTHO05D008852 6.4e-15 85.1 51 70.6
Lsat_1_v5_gn_7_113001 Lactuca sativa HOM05D007258 ORTHO05D008852 2.3e-12 76.6 62 56.5
Migut.I00106 Erythranthe guttata HOM05D007258 ORTHO05D008852 2.9e-07 59.7 37 64.9
Ah.10g038080 Amaranthus hybridus HOM05D007258 ORTHO05D008852 6.4e-07 58.5 36 77.8
MCO01G001 Micromonas commoda HOM05D007258 ORTHO05D008852 5.4e-06 55.5 112 30.4


User provided reference genes

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