Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0008610 Simmondsia chinensis HOM05D004237 ORTHO05D005002 6.8e-207 723.8 372 100.0
Hund16204 Selenicereus undatus HOM05D004237 ORTHO05D005002 2.6e-121 439.5 402 61.7
CSS0027261 Camellia sinensis var. sinensis HOM05D004237 ORTHO05D005002 3.8e-109 399.1 403 58.3
EL10Ac2g04487 Beta vulgaris HOM05D004237 ORTHO05D005002 7.3e-108 394.8 392 57.1
Actinidia17655 Actinidia chinensis HOM05D004237 ORTHO05D005002 6.1e-107 391.7 370 60.8
Sopen02g035740 Solanum pennellii HOM05D004237 ORTHO05D005002 5.2e-106 388.7 385 57.4
Solyc02g091090.4 Solanum lycopersicum HOM05D004237 ORTHO05D005002 2.4e-103 379.8 376 57.4
AUR62023243 Chenopodium quinoa HOM05D004237 ORTHO05D005002 5.4e-103 378.6 391 55.5
Dinv14873 Davidia involucrata HOM05D004237 ORTHO05D005002 3.9e-101 372.5 374 58.3
CiPaw.03G068200 Carya illinoinensis HOM05D004237 ORTHO05D005002 1.9e-100 370.2 389 55.0
Cc07_g08200 Coffea canephora HOM05D004237 ORTHO05D005002 2.8e-99 366.3 383 55.6
Nitab4.5_0002248g0060 Nicotiana tabacum HOM05D004237 ORTHO05D005002 6.2e-99 365.2 392 55.1
Sabra04G0058600 Salix brachista HOM05D004237 ORTHO05D005002 5.2e-98 362.1 406 53.7
MD09G1261100 Malus domestica HOM05D004237 ORTHO05D005002 3.4e-97 359.4 410 53.4
TAR633G2403 Trochodendron aralioides HOM05D004237 ORTHO05D005002 3.7e-96 355.9 401 53.9
Atru.chr4.1671 Acer truncatum HOM05D004237 ORTHO05D005002 6.4e-96 355.1 391 54.7
FvH4_7g06071 Fragaria vesca HOM05D004237 ORTHO05D005002 1.4e-95 354.0 408 54.4
Gohir.D05G281200 Gossypium hirsutum HOM05D004237 ORTHO05D005002 5.4e-95 352.1 401 53.4
Gorai.009G294600 Gossypium raimondii HOM05D004237 ORTHO05D005002 9.2e-95 351.3 401 53.4
Prupe.3G158400 Prunus persica HOM05D004237 ORTHO05D005002 1.6e-94 350.5 407 54.3
Gohir.A05G279600 Gossypium hirsutum HOM05D004237 ORTHO05D005002 2.0e-94 350.1 399 53.1
FAN06G1641 Fragaria x ananassa HOM05D004237 ORTHO05D005002 7.8e-94 348.2 407 54.1
Rhsim08G0085800 Rhododendron simsii HOM05D004237 ORTHO05D005002 7.8e-94 348.2 380 55.8
Cfa007846 Carpinus fangiana HOM05D004237 ORTHO05D005002 1.1e-92 344.4 412 52.4
DCAR_025876 Daucus carota HOM05D004237 ORTHO05D005002 1.9e-92 343.6 380 54.5
Potri.004G088000 Populus trichocarpa HOM05D004237 ORTHO05D005002 1.9e-92 343.6 403 51.4
CAN.G625.84 Capsicum annuum HOM05D004237 ORTHO05D005002 3.3e-92 342.8 372 56.2
Haze_14220 Corylus avellana HOM05D004237 ORTHO05D005002 4.3e-92 342.4 404 53.2
Duzib106G0201 Durio zibethinus HOM05D004237 ORTHO05D005002 9.5e-92 341.3 397 51.6
Eucgr.F02819 Eucalyptus grandis HOM05D004237 ORTHO05D005002 2.8e-91 339.7 435 48.7
RcHm_v2.0_Chr7g0221661 Rosa chinensis HOM05D004237 ORTHO05D005002 1.8e-90 337.0 402 52.2
GSVIVG01030867001 Vitis vinifera HOM05D004237 ORTHO05D005002 4.0e-90 335.9 374 53.2
Thecc.10G175300 Theobroma cacao HOM05D004237 ORTHO05D005002 5.2e-90 335.5 397 52.1
Manes.03G011500 Manihot esculenta HOM05D004237 ORTHO05D005002 5.8e-89 332.0 399 52.4
SalBow3G4435 Salvia bowleyana HOM05D004237 ORTHO05D005002 9.8e-89 331.3 398 51.8
HanXRQChr09g0262291 Helianthus annuus HOM05D004237 ORTHO05D005002 8.3e-88 328.2 382 51.8
Oeu047420.1 Olea europaea HOM05D004237 ORTHO05D005002 1.1e-87 327.8 377 53.1
Aqoxy5G01640 Aquilegia oxysepala HOM05D004237 ORTHO05D005002 7.1e-87 325.1 402 51.0
ECA232G1788 Erigeron canadensis HOM05D004237 ORTHO05D005002 4.6e-86 322.4 372 53.8
Glyma.02G247200 Glycine max HOM05D004237 ORTHO05D005002 1.3e-85 320.9 372 53.0
Phvul.008G233700 Phaseolus vulgaris HOM05D004237 ORTHO05D005002 8.6e-85 318.2 372 53.2
Nn3g18884 Nelumbo nucifera HOM05D004237 ORTHO05D005002 1.2e-83 314.3 410 48.0
PGR004G2154 Punica granatum HOM05D004237 ORTHO05D005002 3.6e-83 312.8 413 47.9
Lsat_1_v5_gn_4_154701 Lactuca sativa HOM05D004237 ORTHO05D005002 2.6e-81 306.6 388 50.5
ClCG05G010910 Citrullus lanatus HOM05D004237 ORTHO05D005002 2.2e-80 303.5 413 46.0
Migut.H00265 Erythranthe guttata HOM05D004237 ORTHO05D005002 4.9e-80 302.4 404 48.0
Sed0014224 Sechium edule HOM05D004237 ORTHO05D005002 4.9e-80 302.4 392 48.5
CANSAT54G2538 Cannabis sativa HOM05D004237 ORTHO05D005002 6.4e-80 302.0 430 45.6
SGA_v2.0_scaffold149G36490 Striga asiatica HOM05D004237 ORTHO05D005002 7.1e-79 298.5 401 46.4
SHI19441 Sapria himalayana HOM05D004237 ORTHO05D005002 9.2e-79 298.1 390 49.0
MELO3C020294.2 Cucumis melo HOM05D004237 ORTHO05D005002 1.2e-78 297.7 415 46.5
QL11p004173 Quercus lobata HOM05D004237 ORTHO05D005002 2.1e-78 297.0 409 46.7
Hma1.2p1_3512F.1_g336510 Hydrangea macrophylla HOM05D004237 ORTHO05D005002 1.7e-77 293.9 375 49.9
Lalb_Chr10g0104521 Lupinus albus HOM05D004237 ORTHO05D005002 8.6e-77 291.6 372 49.5
Cpa.g.sc118.40 Carica papaya HOM05D004237 ORTHO05D005002 1.9e-76 290.4 380 49.5
CsaV3_3G021670 Cucumis sativus L. HOM05D004237 ORTHO05D005002 2.8e-75 286.6 413 45.8
arahy.Tifrunner.gnm1.ann1.MQJ11K Arachis hypogaea HOM05D004237 ORTHO05D005002 3.6e-75 286.2 385 48.8
arahy.Tifrunner.gnm1.ann1.68W1N1 Arachis hypogaea HOM05D004237 ORTHO05D005002 1.3e-72 277.7 384 47.7
LjContig00141g0018818 Lotus japonicus HOM05D004237 ORTHO05D005002 5.1e-69 265.8 372 47.0
Psat2g041040 Pisum sativum HOM05D004237 ORTHO05D005002 3.3e-68 263.1 382 45.8
unitig_899.g14517 Utricularia gibba HOM05D004236 ORTHO05D004903 2.4e-66 256.9 399 44.4
Medtr5g079680 Medicago truncatula HOM05D004237 ORTHO05D005002 5.3e-66 255.8 373 45.3
TPR.G3499 Trifolium pratense HOM05D004237 ORTHO05D005002 3.2e-63 246.5 376 44.1
Ca_05866_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 2.5e-60 236.9 377 42.2
Ca_29976_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 2.5e-60 236.9 377 42.2
Peaxi162Scf00003g00001 Petunia axillaris HOM05D004237 ORTHO05D005002 4.8e-59 232.6 308 49.0
Nitab4.5_0004399g0090 Nicotiana tabacum HOM05D004237 ORTHO05D005002 6.2e-59 232.3 302 50.0
AUR62023195 Chenopodium quinoa HOM05D004237 ORTHO05D005002 4.3e-52 209.5 301 44.2
CDE09G1075 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 5.6e-52 209.1 372 39.0
CDE02G0048 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 2.4e-50 203.8 226 52.2
Lj2P435T33 Lonicera japonica HOM05D004237 ORTHO05D005002 5.3e-50 202.6 273 51.6
MBI08_g18909_MAGBIO Magnolia biondii HOM05D004237 ORTHO05D005002 2.5e-44 183.7 280 43.6
SEGI_05374 Sequoiadendron giganteum HOM05D004237 ORTHO05D005002 7.4e-44 182.2 453 33.8
ATR0743G026 Amborella trichopoda HOM05D004237 ORTHO05D005002 6.3e-43 179.1 479 33.6
SEGI_20207 Sequoiadendron giganteum HOM05D004237 ORTHO05D005002 5.0e-40 169.5 188 50.0
Sabra16G0201600 Salix brachista HOM05D004237 ORTHO05D005002 5.5e-39 166.0 448 33.7
Psat7g073000 Pisum sativum HOM05D004237 ORTHO05D005002 7.2e-39 165.6 129 58.1
HanXRQChr15g0484241 Helianthus annuus HOM05D004237 ORTHO05D005002 1.6e-38 164.5 390 36.4
Lsat_1_v5_gn_2_45661 Lactuca sativa HOM05D004237 ORTHO05D005002 2.7e-38 163.7 129 58.1
Mapoly0008s0013 Marchantia polymorpha HOM05D004237 ORTHO05D005002 2.7e-38 163.7 186 48.9
ATR0561G250 Amborella trichopoda HOM05D004237 ORTHO05D005002 3.6e-38 163.3 144 54.9
Oeu025033.1 Olea europaea HOM05D004237 ORTHO05D005002 7.9e-38 162.2 171 50.3
Potri.001G318600 Populus trichocarpa HOM05D004237 ORTHO05D005002 1.0e-37 161.8 296 38.9
TAR636G2161 Trochodendron aralioides HOM05D004237 ORTHO05D005002 1.0e-37 161.8 185 48.6
Phvul.003G050200 Phaseolus vulgaris HOM05D004237 ORTHO05D005002 1.3e-37 161.4 291 39.5
GSVIVG01021000001 Vitis vinifera HOM05D004237 ORTHO05D005002 1.3e-37 161.4 372 36.0
PGSC0003DMG400026424 Solanum tuberosum HOM05D004237 ORTHO05D005002 2.3e-37 160.6 173 49.1
Glyma.05G153300 Glycine max HOM05D004237 ORTHO05D005002 3.9e-37 159.8 170 50.0
CsaV3_2G011170 Cucumis sativus L. HOM05D004237 ORTHO05D005002 6.7e-37 159.1 122 57.4
unitig_45.g31537 Utricularia gibba HOM05D004237 ORTHO05D005002 6.7e-37 159.1 128 57.8
unitig_578.g16513 Utricularia gibba HOM05D004237 ORTHO05D005002 6.7e-37 159.1 128 57.8
MELO3C020354.2 Cucumis melo HOM05D004237 ORTHO05D005002 8.7e-37 158.7 122 57.4
Actinidia11451 Actinidia chinensis HOM05D004237 ORTHO05D005002 2.5e-36 157.1 257 40.5
vmacro15560 Vaccinium macrocarpon HOM05D004237 ORTHO05D005002 2.5e-36 157.1 165 51.5
Solyc09g092210.4 Solanum lycopersicum HOM05D004237 ORTHO05D005002 3.3e-36 156.8 173 48.6
Sopen09g035130 Solanum pennellii HOM05D004237 ORTHO05D005002 3.3e-36 156.8 173 48.6
TPR.G11799 Trifolium pratense HOM05D004237 ORTHO05D005002 5.7e-36 156.0 185 47.0
CSS0022501 Camellia sinensis var. sinensis HOM05D004237 ORTHO05D005002 1.3e-35 154.8 164 48.8
Nitab4.5_0007828g0040 Nicotiana tabacum HOM05D004237 ORTHO05D005002 2.2e-35 154.1 184 46.7
Rhsim02G0061200 Rhododendron simsii HOM05D004237 ORTHO05D005002 2.8e-35 153.7 172 50.6
RhsimUnG0035800 Rhododendron simsii HOM05D004237 ORTHO05D005002 2.8e-35 153.7 172 50.6
Hma1.2p1_2958F.1_g330800 Hydrangea macrophylla HOM05D004237 ORTHO05D005002 4.8e-35 152.9 286 38.5
Glyma.14G069000 Glycine max HOM05D004237 ORTHO05D005002 6.3e-35 152.5 301 40.9
Lalb_Chr07g0186771 Lupinus albus HOM05D004237 ORTHO05D005002 8.2e-35 152.1 274 39.8
SGA_v2.0_scaffold31G12582 Striga asiatica HOM05D004237 ORTHO05D005002 8.2e-35 152.1 208 45.7
Dinv27207 Davidia involucrata HOM05D004237 ORTHO05D005002 1.1e-34 151.8 413 34.4
Haze_11643 Corylus avellana HOM05D004237 ORTHO05D005002 1.8e-34 151.0 259 40.2
DCAR_030819 Daucus carota HOM05D004237 ORTHO05D005002 3.1e-34 150.2 277 39.4
Manes.03G145100 Manihot esculenta HOM05D004237 ORTHO05D005002 4.1e-34 149.8 441 33.1
arahy.Tifrunner.gnm1.ann1.BLV0FA Arachis hypogaea HOM05D004237 ORTHO05D005002 6.9e-34 149.1 453 32.0
arahy.Tifrunner.gnm1.ann1.T9JHLZ Arachis hypogaea HOM05D004237 ORTHO05D005002 6.9e-34 149.1 453 32.0
MBI11_g07416_MAGBIO Magnolia biondii HOM05D004237 ORTHO05D005002 6.9e-34 149.1 386 35.8
Cpa.g.sc83.32 Carica papaya HOM05D004237 ORTHO05D005002 9.1e-34 148.7 288 38.9
HPP92_024243 Vanilla planifolia HOM05D004237 ORTHO05D005002 2.6e-33 147.1 123 56.9
Atru.chr4.1600 Acer truncatum HOM05D004237 ORTHO05D005002 3.4e-33 146.7 422 34.4
CBR_g29388 Chara braunii HOM05D004237 ORTHO05D005002 3.4e-33 146.7 121 56.2
QL06p026437 Quercus lobata HOM05D004237 ORTHO05D005002 3.4e-33 146.7 102 63.7
Sabra17G0051800 Salix brachista HOM05D004237 ORTHO05D005002 3.4e-33 146.7 298 37.9
Duzib212G0922 Durio zibethinus HOM05D004237 ORTHO05D005002 4.5e-33 146.4 266 38.7
CiPaw.01G118000 Carya illinoinensis HOM05D004237 ORTHO05D005002 3.8e-32 143.3 266 39.5
Manes.15G056100 Manihot esculenta HOM05D004237 ORTHO05D005002 5.0e-32 142.9 456 30.0
Sc13g0000310 Simmondsia chinensis HOM05D004237 ORTHO05D005002 1.1e-31 141.7 294 40.1
Lj4g0001711 Lotus japonicus HOM05D004237 ORTHO05D005002 1.4e-31 141.4 421 32.5
VMungo0251G2499 Vigna mungo HOM05D004237 ORTHO05D005002 1.4e-31 141.4 427 31.9
Potri.017G058200 Populus trichocarpa HOM05D004237 ORTHO05D005002 3.2e-31 140.2 449 32.5
CDE05G0646 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 4.2e-31 139.8 400 31.2
Dinv38185 Davidia involucrata HOM05D004237 ORTHO05D005002 5.5e-31 139.4 429 31.5
FAN12G1632 Fragaria x ananassa HOM05D004237 ORTHO05D005002 5.5e-31 139.4 235 41.7
Prupe.1G163000 Prunus persica HOM05D004237 ORTHO05D005002 5.5e-31 139.4 275 38.2
RcHm_v2.0_Chr4g0413771 Rosa chinensis HOM05D004237 ORTHO05D005002 5.5e-31 139.4 277 38.6
Eucgr.H02692 Eucalyptus grandis HOM05D004237 ORTHO05D005002 1.2e-30 138.3 296 37.8
Ca_17976_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 1.6e-30 137.9 423 33.8
FvH4_4g13400 Fragaria vesca HOM05D004237 ORTHO05D005002 1.6e-30 137.9 235 41.3
MD13G1282300 Malus domestica HOM05D004237 ORTHO05D005002 1.6e-30 137.9 245 40.8
Aqoxy2G03968 Aquilegia oxysepala HOM05D004237 ORTHO05D005002 2.1e-30 137.5 453 31.6
Medtr8g085190 Medicago truncatula HOM05D004237 ORTHO05D005002 2.1e-30 137.5 417 33.3
Migut.N00416 Erythranthe guttata HOM05D004237 ORTHO05D005002 6.1e-30 136.0 145 50.3
Oeu063463.1 Olea europaea HOM05D004237 ORTHO05D005002 6.1e-30 136.0 428 33.2
Peaxi162Scf00047g00110 Petunia axillaris HOM05D004237 ORTHO05D005002 1.0e-29 135.2 430 31.2
CAN.G1565.17 Capsicum annuum HOM05D004237 ORTHO05D005002 1.4e-29 134.8 299 34.8
FAN07G1461 Fragaria x ananassa HOM05D004237 ORTHO05D005002 3.9e-29 133.3 235 40.4
RcHm_v2.0_Chr1g0334211 Rosa chinensis HOM05D004237 ORTHO05D005002 3.9e-29 133.3 284 34.9
Sed0001983 Sechium edule HOM05D004237 ORTHO05D005002 3.9e-29 133.3 101 58.4
MD04G1016300 Malus domestica HOM05D004237 ORTHO05D005002 2.0e-28 131.0 444 31.5
MSTRG.21980 Avicennia marina HOM05D004237 ORTHO05D005002 3.3e-28 130.2 433 31.2
Thecc.04G196500 Theobroma cacao HOM05D004237 ORTHO05D005002 3.3e-28 130.2 451 30.8
Cfa014954 Carpinus fangiana HOM05D004237 ORTHO05D005002 4.4e-28 129.8 432 30.8
Ciclev10004964m.g Citrus clementina HOM05D004237 ORTHO05D005002 2.2e-27 127.5 443 30.9
Gohir.A10G128300 Gossypium hirsutum HOM05D004237 ORTHO05D005002 2.2e-27 127.5 300 34.7
Actinidia28992 Actinidia chinensis HOM05D004237 ORTHO05D005002 2.8e-27 127.1 408 30.9
RcHm_v2.0_Chr1g0333491 Rosa chinensis HOM05D003866 ORTHO05D004508 2.8e-27 127.1 98 64.3
CANSAT78G0306 Cannabis sativa HOM05D004237 ORTHO05D005002 8.2e-27 125.6 419 32.7
COL.COLO4_20213 Corchorus olitorius HOM05D004237 ORTHO05D005002 3.1e-26 123.6 168 42.9
Gorai.011G152800 Gossypium raimondii HOM05D004237 ORTHO05D005002 6.9e-26 122.5 277 36.5
Gohir.D10G137600 Gossypium hirsutum HOM05D004237 ORTHO05D005002 9.1e-26 122.1 259 36.3
ECA238G4613 Erigeron canadensis HOM05D004237 ORTHO05D005002 5.9e-25 119.4 403 30.5
AUR62020847 Chenopodium quinoa HOM05D004237 ORTHO05D005002 7.2e-23 112.5 394 30.5
RcHm_v2.0_Chr1g0333501 Rosa chinensis HOM05D004237 ORTHO05D005002 7.0e-18 95.9 181 43.6
PSO017G6634 Papaver somniferum HOM05D004237 ORTHO05D005002 1.7e-11 74.7 248 32.3
Peaxi162Scf00013g03225 Petunia axillaris HOM05D004237 ORTHO05D005002 7.2e-07 59.3 45 64.4


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