Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 3.3e-192 674.9 334 100.0
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 3.7e-127 458.8 340 69.4
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 9.4e-123 444.1 333 67.9
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 2.7e-122 442.6 346 65.6
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 3.9e-121 438.7 335 67.2
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 6.7e-121 438.0 344 65.4
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 1.5e-120 436.8 346 65.3
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 4.3e-120 435.3 335 66.9
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 4.8e-119 431.8 333 66.1
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 2.4e-118 429.5 316 69.6
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 5.3e-118 428.3 345 63.5
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 1.2e-117 427.2 343 64.4
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 2.6e-117 426.0 345 64.6
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 4.5e-117 425.2 336 64.3
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 1.7e-116 423.3 342 63.7
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 2.2e-116 422.9 345 64.6
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 7.2e-115 417.9 334 64.1
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 9.4e-115 417.5 346 63.6
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 1.2e-114 417.2 340 63.2
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 4.7e-114 415.2 346 61.6
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 4.7e-114 415.2 337 62.9
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 4.7e-114 415.2 337 63.8
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 1.4e-113 413.7 310 67.7
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 2.3e-113 412.9 346 63.0
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 3.0e-113 412.5 332 64.2
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 6.7e-113 411.4 332 64.2
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 1.1e-112 410.6 354 62.7
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 1.5e-112 410.2 346 61.8
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 2.6e-112 409.5 339 63.7
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 3.3e-112 409.1 339 63.4
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 4.4e-112 408.7 327 61.8
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 7.4e-112 407.9 316 65.2
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 9.7e-112 407.5 322 64.3
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 1.7e-111 406.8 336 62.8
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 1.7e-111 406.8 332 63.3
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 1.7e-111 406.8 344 61.0
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 2.8e-111 406.0 333 64.0
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 8.2e-111 404.4 314 63.7
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 1.4e-110 403.7 345 62.3
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 1.8e-110 403.3 341 61.0
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 1.8e-110 403.3 341 61.0
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 3.1e-110 402.5 316 64.6
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 9.1e-110 401.0 318 64.8
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 2.6e-109 399.4 331 62.2
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 4.5e-109 398.7 316 62.7
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 5.9e-109 398.3 331 63.1
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 7.7e-109 397.9 316 62.3
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 1.3e-108 397.1 312 62.5
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 6.5e-108 394.8 331 60.1
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 1.5e-107 393.7 337 61.7
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 1.5e-107 393.7 346 60.7
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 1.9e-107 393.3 337 61.7
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 1.9e-107 393.3 346 59.8
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 4.2e-107 392.1 334 60.8
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 5.5e-107 391.7 331 60.4
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 1.2e-106 390.6 316 62.7
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 2.1e-106 389.8 316 62.0
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 6.1e-106 388.3 323 61.3
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 1.0e-105 387.5 323 63.2
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.0e-105 387.5 326 63.2
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.0e-105 387.5 326 63.2
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 1.0e-105 387.5 335 60.9
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 1.0e-105 387.5 313 62.0
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 1.4e-105 387.1 337 60.5
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 1.4e-105 387.1 313 63.3
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 3.0e-105 386.0 337 60.5
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 4.0e-105 385.6 337 60.2
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 3.3e-104 382.5 329 62.0
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 4.4e-104 382.1 326 61.7
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 3.1e-102 375.9 358 59.8
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 2.9e-100 369.4 310 59.0
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 8.5e-100 367.9 317 59.3
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 3.2e-99 365.9 316 57.3
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 3.4e-96 355.9 278 64.7
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 4.4e-96 355.5 323 57.3
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 1.3e-95 354.0 351 57.0
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 2.2e-95 353.2 290 62.8
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 1.4e-94 350.5 302 61.9
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 2.2e-92 343.2 303 60.1
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 3.4e-88 329.3 297 62.3
COL.COLO4_09336 Corchorus olitorius HOM05D006950 ORTHO05D008798 2.9e-84 316.2 295 57.3
AUR62009002 Chenopodium quinoa HOM05D006950 ORTHO05D008798 2.5e-83 313.2 310 57.4
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 4.0e-81 305.8 284 60.9
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 8.3e-79 298.1 304 49.3
Ca_04046_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 1.8e-78 297.0 210 68.6
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 1.6e-77 293.9 327 50.5
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 3.9e-76 289.3 310 53.5
CARHR214230 Cardamine hirsuta HOM05D006950 ORTHO05D008798 7.3e-75 285.0 210 67.6
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 2.1e-74 283.5 240 61.7
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 2.3e-73 280.0 304 49.7
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 2.0e-72 276.9 242 60.7
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 8.6e-68 261.5 304 44.1
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 5.6e-67 258.8 331 46.8
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 1.1e-59 234.6 218 57.8
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 2.6e-56 223.4 339 36.3
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 9.2e-54 214.9 203 59.6
arahy.Tifrunner.gnm1.ann1.IRCK44 Arachis hypogaea HOM05D006950 ORTHO05D008798 5.1e-52 209.1 171 59.6
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 3.3e-51 206.5 373 34.9
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 2.1e-50 203.8 191 56.5
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 1.9e-46 190.7 259 39.0
arahy.Tifrunner.gnm1.ann1.5L16AK Arachis hypogaea HOM05D006950 ORTHO05D008798 5.8e-40 169.1 197 46.7
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 9.9e-40 168.3 284 37.7
arahy.Tifrunner.gnm1.ann1.J8JPII Arachis hypogaea HOM05D006950 ORTHO05D008798 1.0e-36 158.3 197 43.7
QL02p051310 Quercus lobata HOM05D006950 ORTHO05D008798 2.4e-33 147.1 88 76.1
Ca_04053_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 3.4e-32 143.3 88 73.9
Glyma.08G365850 Glycine max HOM05D006950 ORTHO05D008798 2.2e-31 140.6 100 68.0
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 2.7e-29 133.7 133 54.1
Solyc02g086080.4 Solanum lycopersicum HOM05D006950 ORTHO05D008798 2.5e-27 127.1 100 59.0
arahy.Tifrunner.gnm1.ann1.BFZE3W Arachis hypogaea HOM05D006950 ORTHO05D008798 5.6e-27 125.9 91 67.0
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.1e-26 124.0 106 61.3
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 2.8e-26 123.6 107 55.1
PRCOL_00005525 Prasinoderma coloniale HOM05D006950 ORTHO05D008798 5.8e-24 115.9 348 28.4
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 7.1e-22 109.0 126 50.8
AagrBONN_evm.TU.Sc2ySwM_368.701 Anthoceros agrestis HOM05D006950 ORTHO05D008798 2.4e-17 94.0 286 25.2
Haze_01682 Corylus avellana HOM05D006950 ORTHO05D043621 5.9e-08 62.8 30 83.3


User provided reference genes

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