Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0008240 Simmondsia chinensis HOM05D007149 ORTHO05D008956 3.1e-47 191.4 94 100.0
Hund13727 Selenicereus undatus HOM05D007149 ORTHO05D008956 3.8e-37 157.9 94 80.9
Thecc.04G136400 Theobroma cacao HOM05D007149 ORTHO05D008956 3.2e-36 154.8 88 80.7
Solyc02g063085.1 Solanum lycopersicum HOM05D007149 ORTHO05D008956 7.1e-36 153.7 88 81.8
COL.COLO4_16183 Corchorus olitorius HOM05D007149 ORTHO05D008956 9.3e-36 153.3 88 80.7
Peaxi162Scf00501g00121 Petunia axillaris HOM05D007149 ORTHO05D008956 9.3e-36 153.3 88 81.8
Ah.10g037580 Amaranthus hybridus HOM05D007149 ORTHO05D008956 1.2e-35 152.9 84 86.9
Nn4g23775 Nelumbo nucifera HOM05D007149 ORTHO05D008956 1.6e-35 152.5 91 76.9
Glyma.19G046200 Glycine max HOM05D007149 ORTHO05D008956 2.7e-35 151.8 89 79.8
THA.LOC104827153 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 3.5e-35 151.4 94 77.7
Ciclev10013207m.g Citrus clementina HOM05D007149 ORTHO05D008956 6.0e-35 150.6 84 85.7
HanXRQChr12g0376461 Helianthus annuus HOM05D007149 ORTHO05D008956 6.0e-35 150.6 94 76.6
Sabra17G0093700 Salix brachista HOM05D007149 ORTHO05D008956 6.0e-35 150.6 90 77.8
Actinidia15873 Actinidia chinensis HOM05D007149 ORTHO05D008956 7.9e-35 150.2 90 78.9
Cpa.g.sc179.16 Carica papaya HOM05D007149 ORTHO05D008956 7.9e-35 150.2 89 80.9
Eucgr.J01478 Eucalyptus grandis HOM05D007149 ORTHO05D008956 1.0e-34 149.8 90 80.0
Lalb_Chr04g0257361 Lupinus albus HOM05D007149 ORTHO05D008956 1.0e-34 149.8 86 82.6
vmacro05569 Vaccinium macrocarpon HOM05D007149 ORTHO05D008956 1.0e-34 149.8 84 84.5
Aqoxy3G03934 Aquilegia oxysepala HOM05D007149 ORTHO05D008956 1.3e-34 149.4 84 84.5
CSS0003707 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 1.3e-34 149.4 88 80.7
Manes.01G108800 Manihot esculenta HOM05D007149 ORTHO05D008956 1.3e-34 149.4 84 83.3
Cfa007939 Carpinus fangiana HOM05D007149 ORTHO05D008956 1.8e-34 149.1 94 75.5
Cc07_g08920 Coffea canephora HOM05D007149 ORTHO05D008956 1.8e-34 149.1 83 88.0
Lj2g0020616 Lotus japonicus HOM05D007149 ORTHO05D008956 1.8e-34 149.1 86 81.4
QL02p051591 Quercus lobata HOM05D007149 ORTHO05D008956 1.8e-34 149.1 93 77.4
THA.LOC104803005 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 1.8e-34 149.1 94 75.5
MELO3C022093.2 Cucumis melo HOM05D007149 ORTHO05D008956 2.3e-34 148.7 85 82.4
CiPaw.04G040600 Carya illinoinensis HOM05D007149 ORTHO05D008956 3.0e-34 148.3 84 85.7
Hma1.2p1_0550F.1_g177300 Hydrangea macrophylla HOM05D007149 ORTHO05D008956 3.0e-34 148.3 84 83.3
TWI74G0718 Tripterygium wilfordii HOM05D007149 ORTHO05D008956 3.0e-34 148.3 94 74.5
ATR0665G039 Amborella trichopoda HOM05D007149 ORTHO05D008956 5.1e-34 147.5 89 78.7
CSS0003918 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 5.1e-34 147.5 88 79.5
Gohir.A07G071500 Gossypium hirsutum HOM05D007149 ORTHO05D008956 5.1e-34 147.5 88 78.4
Gohir.D07G076000 Gossypium hirsutum HOM05D007149 ORTHO05D008956 5.1e-34 147.5 88 78.4
Gorai.001G080200 Gossypium raimondii HOM05D007149 ORTHO05D008956 5.1e-34 147.5 88 78.4
Ca_13737_v3 Cicer arietinum L. HOM05D007149 ORTHO05D008956 6.7e-34 147.1 84 84.5
Sed0025185 Sechium edule HOM05D007149 ORTHO05D008956 6.7e-34 147.1 82 86.6
HPP92_011090 Vanilla planifolia HOM05D007149 ORTHO05D008956 6.7e-34 147.1 88 79.5
CAN.G953.15 Capsicum annuum HOM05D007149 ORTHO05D008956 8.7e-34 146.7 88 76.1
Atru.chr8.867 Acer truncatum HOM05D007149 ORTHO05D008956 1.5e-33 146.0 81 86.4
Dinv34841 Davidia involucrata HOM05D007149 ORTHO05D008956 1.5e-33 146.0 84 82.1
Zm00001eb011230 Zea mays HOM05D007149 ORTHO05D008956 1.5e-33 146.0 84 81.0
CANSAT64G1005 Cannabis sativa HOM05D007149 ORTHO05D008956 1.9e-33 145.6 84 82.1
CDE11G0018 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 1.9e-33 145.6 84 83.3
Os03g0257900 Oryza sativa ssp. japonica HOM05D007149 ORTHO05D008956 1.9e-33 145.6 84 83.3
PGR004G0481 Punica granatum HOM05D007149 ORTHO05D008956 1.9e-33 145.6 84 81.0
Phvul.004G064400 Phaseolus vulgaris HOM05D007149 ORTHO05D008956 2.5e-33 145.2 89 77.5
Migut.H00206 Erythranthe guttata HOM05D007149 ORTHO05D008956 3.3e-33 144.8 84 82.1
Lsat_1_v5_gn_3_78860 Lactuca sativa HOM05D007149 ORTHO05D008956 3.3e-33 144.8 90 76.7
Potri.017G113401 Populus trichocarpa HOM05D007149 ORTHO05D008956 5.6e-33 144.1 90 74.4
CsaV3_5G039180 Cucumis sativus L. HOM05D007149 ORTHO05D008956 7.4e-33 143.7 84 81.0
EL10Ac2g04594 Beta vulgaris HOM05D007149 ORTHO05D008956 1.3e-32 142.9 81 82.7
Actinidia36312 Actinidia chinensis HOM05D007149 ORTHO05D008956 1.6e-32 142.5 84 79.8
PSO782G5258 Papaver somniferum HOM05D007149 ORTHO05D008956 1.6e-32 142.5 84 78.6
CiPaw.03G060400 Carya illinoinensis HOM05D007149 ORTHO05D008956 2.1e-32 142.1 84 81.0
Medtr0024s0060 Medicago truncatula HOM05D007149 ORTHO05D008956 2.1e-32 142.1 85 80.0
PSO063G3907 Papaver somniferum HOM05D007149 ORTHO05D008956 3.7e-32 141.4 84 78.6
MD17G1105000 Malus domestica HOM05D007149 ORTHO05D008956 8.1e-32 140.2 94 71.3
DCAR_017207 Daucus carota HOM05D007149 ORTHO05D008956 1.1e-31 139.8 84 78.6
unitig_899.g14509 Utricularia gibba HOM05D007149 ORTHO05D008956 1.1e-31 139.8 83 80.7
Aa31LG11G13550 Aethionema arabicum HOM05D007149 ORTHO05D008956 1.4e-31 139.4 86 76.7
FvH4_6g45250 Fragaria vesca HOM05D007149 ORTHO05D008956 1.4e-31 139.4 91 70.3
FAN09G4869 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.4e-31 139.4 91 70.3
FAN14G5255 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.4e-31 139.4 91 70.3
RcHm_v2.0_Chr2g0162971 Rosa chinensis HOM05D007149 ORTHO05D008956 1.4e-31 139.4 91 70.3
Psat1g079040 Pisum sativum HOM05D007149 ORTHO05D008956 1.8e-31 139.0 89 75.3
MD07G1095900 Malus domestica HOM05D007149 ORTHO05D008956 2.4e-31 138.7 90 73.3
Sp6g28070 Schrenkiella parvula HOM05D007149 ORTHO05D008956 4.5e-30 134.4 82 79.3
GSVIVG01031069001 Vitis vinifera HOM05D007149 ORTHO05D008956 4.5e-30 134.4 94 64.9
Thhalv10015129m.g Eutrema salsugineum HOM05D007149 ORTHO05D008956 5.8e-30 134.0 93 74.2
BcaB08g36883 Brassica carinata HOM05D007149 ORTHO05D008956 7.6e-30 133.7 82 78.0
AL6G26940 Arabidopsis lyrata HOM05D007149 ORTHO05D008956 9.9e-30 133.3 93 73.1
AT5G16060 Arabidopsis thaliana HOM05D007149 ORTHO05D008956 1.3e-29 132.9 93 72.0
BcaC04g18912 Brassica carinata HOM05D007149 ORTHO05D008956 1.3e-29 132.9 82 76.8
A10p23000 Brassica napus HOM05D007149 ORTHO05D008956 1.3e-29 132.9 82 76.8
C09p60970 Brassica napus HOM05D007149 ORTHO05D008956 1.3e-29 132.9 82 76.8
BolC9t58944H Brassica oleracea HOM05D007149 ORTHO05D008956 1.3e-29 132.9 82 76.8
BraA10t44369Z Brassica rapa HOM05D007149 ORTHO05D008956 1.3e-29 132.9 82 76.8
Duzib133G0440 Durio zibethinus HOM05D007149 ORTHO05D008956 1.3e-29 132.9 126 55.6
CARHR197250 Cardamine hirsuta HOM05D007149 ORTHO05D008956 2.9e-29 131.7 82 76.8
Carub.0006s1425 Capsella rubella HOM05D007149 ORTHO05D008956 3.8e-29 131.3 93 72.0
FAN09G3419 Fragaria x ananassa HOM05D007149 ORTHO05D008956 4.9e-29 131.0 102 62.7
Haze_14138 Corylus avellana HOM05D007149 ORTHO05D008956 1.6e-27 125.9 69 85.5
FAN02G3200 Fragaria x ananassa HOM05D007149 ORTHO05D008956 2.1e-27 125.6 103 59.2
SalBow3G3356 Salvia bowleyana HOM05D007149 ORTHO05D008956 1.3e-26 122.9 68 86.8
ClCG11G005400 Citrullus lanatus HOM05D007149 ORTHO05D008956 3.9e-26 121.3 66 87.9
HPP92_011107 Vanilla planifolia HOM05D007149 ORTHO05D008956 3.9e-26 121.3 67 85.1
PGSC0003DMG400024179 Solanum tuberosum HOM05D007149 ORTHO05D008956 5.1e-26 120.9 72 75.0
CDE05G2183 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 1.1e-25 119.8 67 85.1
Nn3g17784 Nelumbo nucifera HOM05D007149 ORTHO05D008956 1.1e-25 119.8 68 76.5
arahy.Tifrunner.gnm1.ann1.2T9F1Z Arachis hypogaea HOM05D007149 ORTHO05D008956 3.3e-25 118.2 77 71.4
arahy.Tifrunner.gnm1.ann1.HVR4ZG Arachis hypogaea HOM05D007149 ORTHO05D008956 3.3e-25 118.2 77 71.4
Nitab4.5_0001569g0020 Nicotiana tabacum HOM05D007149 ORTHO05D008956 7.4e-25 117.1 71 73.2
SHI30170 Sapria himalayana HOM05D007149 ORTHO05D008956 9.6e-25 116.7 67 80.6
TPR.G32450 Trifolium pratense HOM05D007149 ORTHO05D008956 1.6e-24 115.9 67 85.1
AagrBONN_evm.TU.Sc2ySwM_228.1220 Anthoceros agrestis HOM05D007149 ORTHO05D008956 3.7e-24 114.8 82 64.6
Sopen02g014160 Solanum pennellii HOM05D007149 ORTHO05D008956 2.4e-23 112.1 65 75.4
Aa31LG2G17140 Aethionema arabicum HOM05D007149 ORTHO05D008956 3.1e-23 111.7 70 72.9
Carub.0055s0008 Capsella rubella HOM05D007149 ORTHO05D008956 7.6e-22 107.1 65 76.9
ECA246G4376 Erigeron canadensis HOM05D007149 ORTHO05D008956 1.0e-21 106.7 71 66.2
SalBow6G3599 Salvia bowleyana HOM05D007149 ORTHO05D008956 8.4e-21 103.6 71 66.2
AUR62014527 Chenopodium quinoa HOM05D007149 ORTHO05D008956 1.4e-20 102.8 66 69.7
Pp3c20_17910 Physcomitrium patens HOM05D007149 ORTHO05D008956 3.2e-20 101.7 81 59.3
SMO356G0237 Selaginella moellendorffii HOM05D007149 ORTHO05D008956 9.3e-20 100.1 78 60.3
Prupe.3G238900 Prunus persica HOM05D007149 ORTHO05D008956 3.0e-18 95.1 61 70.5
Mapoly0073s0075 Marchantia polymorpha HOM05D007149 ORTHO05D008956 8.2e-16 87.0 61 65.6
RcHm_v2.0_Chr2g0163021 Rosa chinensis HOM05D007149 ORTHO05D008956 3.1e-15 85.1 67 62.7
Nitab4.5_0002288g0070 Nicotiana tabacum HOM05D007149 ORTHO05D008956 1.7e-13 79.3 91 50.5
SGA_v2.0_scaffold33G13472 Striga asiatica HOM05D007149 ORTHO05D008956 2.2e-13 79.0 45 73.3
PRCOL_00003753 Prasinoderma coloniale HOM05D007149 ORTHO05D008956 9.4e-12 73.6 75 49.3
MCO15G246 Micromonas commoda HOM05D007149 ORTHO05D008956 2.1e-11 72.4 70 47.1


User provided reference genes

Program Settings