Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0008190 Simmondsia chinensis HOM05D001385 ORTHO05D004434 2.0e-78 295.8 161 100.0
Sc10g0006250 Simmondsia chinensis HOM05D001385 ORTHO05D008760 6.7e-18 94.7 46 97.8
AUR62039827 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.2e-14 84.0 80 48.8
AUR62030226 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.6e-14 82.8 74 51.4
AUR62040137 Chenopodium quinoa HOM05D001385 ORTHO05D008760 7.7e-14 81.3 80 46.2
AUR62003191 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.0e-13 80.9 74 51.4
EL10Ac1g02060 Beta vulgaris HOM05D001385 ORTHO05D008760 1.7e-13 80.1 76 47.4
Sc13g0007340 Simmondsia chinensis HOM05D001385 ORTHO05D004434 1.7e-13 80.1 46 82.6
EL10Ac6g14499 Beta vulgaris HOM05D001385 ORTHO05D008760 5.0e-13 78.6 70 52.9
EL10Ac7g18151 Beta vulgaris HOM05D001385 ORTHO05D008760 5.0e-13 78.6 70 52.9
AUR62005475 Chenopodium quinoa HOM05D001385 ORTHO05D004434 5.0e-13 78.6 74 51.4
EL10Ac7g16607 Beta vulgaris HOM05D001385 ORTHO05D008760 1.2e-11 73.9 134 35.8
EL10Ac9g21493 Beta vulgaris HOM05D001385 ORTHO05D004434 1.6e-11 73.6 74 47.3
AUR62043334 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.6e-11 73.6 65 49.2
EL10Ac2g03907 Beta vulgaris HOM05D001385 ORTHO05D008760 3.6e-11 72.4 144 34.7
EL10Ac8g19807 Beta vulgaris HOM05D001385 ORTHO05D008760 3.6e-11 72.4 144 34.7
AUR62010149 Chenopodium quinoa HOM05D001385 ORTHO05D004434 3.6e-11 72.4 127 37.0
EL10Ac9g21092 Beta vulgaris HOM05D001385 ORTHO05D008760 6.1e-11 71.6 144 34.7
AUR62002718 Chenopodium quinoa HOM05D001385 ORTHO05D008760 6.1e-11 71.6 75 45.3
EL10Ac3g06245 Beta vulgaris HOM05D001385 ORTHO05D008760 8.0e-11 71.2 99 39.4
EL10Ac8g20048 Beta vulgaris HOM05D000107 ORTHO05D000062 8.0e-11 71.2 99 39.4
AUR62013145 Chenopodium quinoa HOM05D001385 ORTHO05D000378 8.0e-11 71.2 150 34.0
EL10Ac1g01188 Beta vulgaris HOM05D001385 ORTHO05D008760 1.0e-10 70.9 144 34.0
EL10Ac4g09023 Beta vulgaris HOM05D001385 ORTHO05D008760 1.0e-10 70.9 144 34.0
EL10Ac1g01131 Beta vulgaris HOM05D001385 ORTHO05D008760 1.4e-10 70.5 77 42.9
EL10Ac6g14099 Beta vulgaris HOM05D001385 ORTHO05D008760 1.4e-10 70.5 77 42.9
Hund06374 Selenicereus undatus HOM05D001385 ORTHO05D004434 1.4e-10 70.5 129 36.4
Hund06375 Selenicereus undatus HOM05D001385 ORTHO05D004434 1.4e-10 70.5 68 54.4
AUR62029692 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.8e-10 70.1 75 44.0
EL10Ac5g11862 Beta vulgaris HOM05D001385 ORTHO05D008760 2.3e-10 69.7 99 39.4
EL10Ac7g17195 Beta vulgaris HOM05D000107 ORTHO05D000062 2.3e-10 69.7 74 45.9
AUR62014303 Chenopodium quinoa HOM05D001385 ORTHO05D008760 3.0e-10 69.3 66 50.0
EL10Ac4g08961 Beta vulgaris HOM05D000107 ORTHO05D000062 3.9e-10 68.9 99 38.4
AUR62034766 Chenopodium quinoa HOM05D001385 ORTHO05D008760 5.2e-10 68.6 111 36.0
AUR62042768 Chenopodium quinoa HOM05D001385 ORTHO05D008760 5.2e-10 68.6 65 46.2
AUR62043185 Chenopodium quinoa HOM05D001385 ORTHO05D008760 5.2e-10 68.6 65 46.2
AUR62041104 Chenopodium quinoa HOM05D001385 ORTHO05D008760 6.7e-10 68.2 72 43.1
EL10Ac3g06415 Beta vulgaris HOM05D001385 ORTHO05D008760 8.8e-10 67.8 117 34.2
AUR62041069 Chenopodium quinoa HOM05D001385 ORTHO05D008760 8.8e-10 67.8 65 49.2
AUR62028251 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.1e-09 67.4 72 45.8
EL10Ac4g08894 Beta vulgaris HOM05D001385 ORTHO05D008760 1.5e-09 67.0 129 32.6
AUR62039729 Chenopodium quinoa HOM05D001385 ORTHO05D008760 7.4e-09 64.7 66 48.5
AUR62016349 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.7e-08 63.5 75 42.7
Ah.02g117910 Amaranthus hybridus HOM05D001385 ORTHO05D008760 3.7e-08 62.4 73 45.2
AUR62026509 Chenopodium quinoa HOM05D001385 ORTHO05D008760 6.3e-08 61.6 155 32.3
AUR62042068 Chenopodium quinoa HOM05D001385 ORTHO05D008760 6.3e-08 61.6 72 41.7
Ah.02g120890 Amaranthus hybridus HOM05D001385 ORTHO05D008760 8.2e-08 61.2 72 41.7
Ah.05g175550 Amaranthus hybridus HOM05D001385 ORTHO05D008760 8.2e-08 61.2 72 41.7
Ah.05g177810 Amaranthus hybridus HOM05D001385 ORTHO05D002073 8.2e-08 61.2 72 41.7
Ah.10g025260 Amaranthus hybridus HOM05D001385 ORTHO05D008760 8.2e-08 61.2 72 41.7
EL10Ac5g12063 Beta vulgaris HOM05D000107 ORTHO05D000062 8.2e-08 61.2 105 36.2
EL10Ac1g02023 Beta vulgaris HOM05D001385 ORTHO05D008760 1.1e-07 60.8 56 50.0
AUR62013950 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.1e-07 60.8 75 40.0
Ah.02g123480 Amaranthus hybridus HOM05D001385 ORTHO05D008760 1.4e-07 60.5 139 31.7
EL10Ac9g20910 Beta vulgaris HOM05D001385 ORTHO05D008760 1.8e-07 60.1 52 53.8
AUR62034140 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.8e-07 60.1 75 40.0
AUR62040146 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.8e-07 60.1 73 39.7
EL10Ac1g01824 Beta vulgaris HOM05D001385 ORTHO05D008760 2.4e-07 59.7 57 50.9
EL10Ac5g11714 Beta vulgaris HOM05D000107 ORTHO05D000062 3.1e-07 59.3 68 47.1
AUR62043841 Chenopodium quinoa HOM05D001385 ORTHO05D008760 3.1e-07 59.3 72 41.7
Ah.10g025350 Amaranthus hybridus HOM05D001385 ORTHO05D008760 4.1e-07 58.9 73 42.5
Ah.08g221340 Amaranthus hybridus HOM05D001385 ORTHO05D008760 5.3e-07 58.5 132 31.8
Hund00070 Selenicereus undatus HOM05D001385 ORTHO05D004434 7.0e-07 58.2 75 41.3
Hund11417 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.6e-06 57.0 64 40.6
Ah.01g010370 Amaranthus hybridus HOM05D001385 ORTHO05D008760 2.0e-06 56.6 72 38.9
AUR62042851 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.0e-06 56.6 72 43.1
AUR62037359 Chenopodium quinoa HOM05D001385 ORTHO05D008760 4.5e-06 55.5 56 48.2
Hund04034 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.5e-06 55.5 64 42.2
Hund30624 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.5e-06 55.5 64 42.2
Hund30625 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.5e-06 55.5 64 42.2
Hund01166 Selenicereus undatus HOM05D004066 ORTHO05D004434 5.9e-06 55.1 64 40.6
Hund01500 Selenicereus undatus HOM05D004066 ORTHO05D004434 5.9e-06 55.1 64 40.6
Hund01503 Selenicereus undatus HOM05D004066 ORTHO05D004434 5.9e-06 55.1 64 40.6
Hund11364 Selenicereus undatus HOM05D004066 ORTHO05D004434 5.9e-06 55.1 64 40.6
Hund13844 Selenicereus undatus HOM05D004066 ORTHO05D004434 5.9e-06 55.1 64 40.6
Hund13918 Selenicereus undatus HOM05D004066 ORTHO05D004434 5.9e-06 55.1 64 40.6
Hund14776 Selenicereus undatus HOM05D004066 ORTHO05D004434 5.9e-06 55.1 64 40.6
Hund15061 Selenicereus undatus HOM05D004066 ORTHO05D004434 5.9e-06 55.1 64 40.6
Hund28976 Selenicereus undatus HOM05D004066 ORTHO05D004434 5.9e-06 55.1 64 39.1
Hund28977 Selenicereus undatus HOM05D004066 ORTHO05D004434 5.9e-06 55.1 64 39.1
Hund29980 Selenicereus undatus HOM05D004066 ORTHO05D004434 5.9e-06 55.1 64 39.1
Hund30796 Selenicereus undatus HOM05D004066 ORTHO05D004434 5.9e-06 55.1 64 40.6
EL10Ac2g03369 Beta vulgaris HOM05D000107 ORTHO05D000062 7.7e-06 54.7 56 46.4
Hund12908 Selenicereus undatus HOM05D004066 ORTHO05D004434 7.7e-06 54.7 64 42.2
Hund24360 Selenicereus undatus HOM05D004066 ORTHO05D004434 7.7e-06 54.7 64 40.6


User provided reference genes

Program Settings