Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0007970 Simmondsia chinensis HOM05D007474 ORTHO05D009367 5.5e-114 414.5 232 100.0
EL10Ac2g04755 Beta vulgaris HOM05D007474 ORTHO05D009367 1.1e-61 240.7 239 57.7
AUR62012086 Chenopodium quinoa HOM05D007474 ORTHO05D009367 1.1e-56 224.2 239 54.8
AUR62039378 Chenopodium quinoa HOM05D007474 ORTHO05D009367 3.1e-56 222.6 239 55.6
Dinv41187 Davidia involucrata HOM05D007474 ORTHO05D009367 6.4e-54 214.9 249 52.6
Haze_22034 Corylus avellana HOM05D007474 ORTHO05D009367 1.6e-52 210.3 243 51.9
Haze_22037 Corylus avellana HOM05D007474 ORTHO05D009367 1.6e-52 210.3 243 51.9
GSVIVG01029310001 Vitis vinifera HOM05D007474 ORTHO05D009367 6.6e-51 204.9 249 48.2
Cfa013460 Carpinus fangiana HOM05D007474 ORTHO05D009367 1.1e-50 204.1 252 50.0
AUR62039384 Chenopodium quinoa HOM05D007474 ORTHO05D009367 1.5e-50 203.8 225 55.1
TAR625G0702 Trochodendron aralioides HOM05D007474 ORTHO05D009367 1.9e-50 203.4 249 48.6
CiPaw.07G198000 Carya illinoinensis HOM05D007474 ORTHO05D009367 3.3e-50 202.6 250 48.8
Manes.02G078300 Manihot esculenta HOM05D007474 ORTHO05D009367 4.3e-50 202.2 249 48.6
Actinidia02497 Actinidia chinensis HOM05D007474 ORTHO05D009367 7.3e-50 201.4 249 50.6
Ciclev10010167m.g Citrus clementina HOM05D007474 ORTHO05D009367 9.6e-50 201.1 249 49.8
RcHm_v2.0_Chr4g0399191 Rosa chinensis HOM05D007474 ORTHO05D009367 9.6e-50 201.1 244 50.0
FAN17G0817 Fragaria x ananassa HOM05D007474 ORTHO05D009367 2.1e-49 199.9 248 49.6
Duzib170G0522 Durio zibethinus HOM05D007474 ORTHO05D009367 6.2e-49 198.4 250 50.4
Nn8g40674 Nelumbo nucifera HOM05D007474 ORTHO05D009367 5.3e-48 195.3 249 47.8
THA.LOC104813505 Tarenaya hassleriana HOM05D007474 ORTHO05D009367 5.3e-48 195.3 252 46.8
FvH4_4g07070 Fragaria vesca HOM05D007474 ORTHO05D009367 6.9e-48 194.9 246 50.0
Prupe.1G073900 Prunus persica HOM05D007474 ORTHO05D009367 6.9e-48 194.9 249 49.8
Thecc.09G187600 Theobroma cacao HOM05D007474 ORTHO05D009367 1.5e-47 193.7 246 49.2
Atru.chr7.945_Atru.chr7.946 Acer truncatum HOM05D007474 ORTHO05D009367 2.6e-47 193.0 249 49.0
A03p56400 Brassica napus HOM05D007474 ORTHO05D009367 1.1e-45 187.6 247 46.2
Carub.0007s1493 Capsella rubella HOM05D007474 ORTHO05D009367 1.4e-45 187.2 247 46.2
FAN07G0784 Fragaria x ananassa HOM05D007474 ORTHO05D009367 4.2e-45 185.7 255 48.2
FAN22G0500 Fragaria x ananassa HOM05D007474 ORTHO05D009367 5.4e-45 185.3 250 47.6
AT4G26020 Arabidopsis thaliana HOM05D007474 ORTHO05D009367 7.1e-45 184.9 247 47.0
Psat1g143800 Pisum sativum HOM05D007474 ORTHO05D009367 7.1e-45 184.9 252 44.8
Phvul.009G235500 Phaseolus vulgaris HOM05D007474 ORTHO05D009367 9.3e-45 184.5 249 47.4
C07p54630 Brassica napus HOM05D007474 ORTHO05D009367 2.1e-44 183.3 247 45.3
Rhsim01G0114800 Rhododendron simsii HOM05D007474 ORTHO05D009367 2.7e-44 183.0 251 47.0
Thhalv10027087m.g Eutrema salsugineum HOM05D007474 ORTHO05D009367 6.0e-44 181.8 247 46.6
Sp7g24050 Schrenkiella parvula HOM05D007474 ORTHO05D009367 6.0e-44 181.8 247 46.6
CARHR233540 Cardamine hirsuta HOM05D007474 ORTHO05D009367 7.9e-44 181.4 247 44.9
PSO063G0774 Papaver somniferum HOM05D007474 ORTHO05D009367 7.9e-44 181.4 245 47.3
Medtr2g038090 Medicago truncatula HOM05D007474 ORTHO05D009367 1.0e-43 181.0 251 46.2
Rhsim01G0114300 Rhododendron simsii HOM05D007474 ORTHO05D009367 1.0e-43 181.0 251 46.2
Ah.09g225720 Amaranthus hybridus HOM05D007474 ORTHO05D009367 1.3e-43 180.6 239 47.3
TPR.G7578 Trifolium pratense HOM05D007474 ORTHO05D009367 1.3e-43 180.6 243 45.7
MD16G1247400 Malus domestica HOM05D007474 ORTHO05D009367 2.3e-43 179.9 228 49.1
FAN12G4033 Fragaria x ananassa HOM05D007474 ORTHO05D009367 3.9e-43 179.1 253 47.4
Gohir.A02G011900 Gossypium hirsutum HOM05D007474 ORTHO05D009367 3.9e-43 179.1 251 45.8
Lj6g0008723 Lotus japonicus HOM05D007474 ORTHO05D009367 6.7e-43 178.3 251 45.0
VMungo1309G2929 Vigna mungo HOM05D007474 ORTHO05D009367 9.6e-42 174.5 251 45.8
Lsat_1_v5_gn_7_55841 Lactuca sativa HOM05D007474 ORTHO05D009367 1.3e-41 174.1 246 47.6
Lalb_Chr23g0276761 Lupinus albus HOM05D007474 ORTHO05D009367 3.7e-41 172.6 251 43.8
AL7G26960 Arabidopsis lyrata HOM05D007474 ORTHO05D009367 4.8e-41 172.2 247 45.3
BolC7t45951H Brassica oleracea HOM05D007474 ORTHO05D009367 4.8e-41 172.2 265 42.3
Cc06_g17460 Coffea canephora HOM05D007474 ORTHO05D009367 1.8e-40 170.2 240 45.0
Nitab4.5_0011174g0010 Nicotiana tabacum HOM05D007474 ORTHO05D009367 2.4e-40 169.9 249 43.8
Peaxi162Scf00231g01013 Petunia axillaris HOM05D007474 ORTHO05D009367 3.1e-40 169.5 245 43.3
Cpa.g.sc95.3 Carica papaya HOM05D007474 ORTHO05D009367 4.0e-40 169.1 250 44.4
HanXRQChr03g0065461 Helianthus annuus HOM05D007474 ORTHO05D009367 4.0e-40 169.1 249 44.6
CAN.G107.39 Capsicum annuum HOM05D007474 ORTHO05D009367 6.9e-40 168.3 241 42.7
Aa31LG3G380 Aethionema arabicum HOM05D007474 ORTHO05D009367 1.5e-39 167.2 250 44.4
Aqoxy7G02873 Aquilegia oxysepala HOM05D007474 ORTHO05D009367 1.5e-39 167.2 231 44.2
PSO170G3200 Papaver somniferum HOM05D007474 ORTHO05D009367 1.5e-39 167.2 295 40.7
Glyma.09G060400 Glycine max HOM05D007474 ORTHO05D009367 4.5e-39 165.6 251 43.8
QL04p010614 Quercus lobata HOM05D007474 ORTHO05D009367 4.5e-39 165.6 251 45.4
CANSAT56G2223 Cannabis sativa HOM05D007474 ORTHO05D009367 9.9e-39 164.5 248 43.5
ECA240G4744 Erigeron canadensis HOM05D007474 ORTHO05D009367 2.9e-38 162.9 241 43.2
arahy.Tifrunner.gnm1.ann1.0S7KVV Arachis hypogaea HOM05D007474 ORTHO05D009367 1.1e-37 161.0 227 43.6
PGR142G1289 Punica granatum HOM05D007474 ORTHO05D009367 4.2e-37 159.1 258 41.5
arahy.Tifrunner.gnm1.ann1.FGVY1L Arachis hypogaea HOM05D007474 ORTHO05D009367 5.5e-37 158.7 227 43.2
Hma1.2p1_0235F.1_g098730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 5.5e-37 158.7 214 45.3
TWI63G0256 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 3.5e-36 156.0 249 41.8
Gohir.D02G012700 Gossypium hirsutum HOM05D007474 ORTHO05D009367 3.9e-35 152.5 246 42.3
Gorai.005G016200 Gossypium raimondii HOM05D007474 ORTHO05D009367 2.1e-33 146.7 251 41.4
Zm00001eb232320 Zea mays HOM05D007474 ORTHO05D009367 1.8e-32 143.7 246 37.8
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 6.9e-32 141.7 232 41.4
BcaC06g32774 Brassica carinata HOM05D007474 ORTHO05D009367 9.0e-32 141.4 247 40.5
Hund13756 Selenicereus undatus HOM05D007474 ORTHO05D009367 2.6e-31 139.8 132 58.3
Os02g0148600 Oryza sativa ssp. japonica HOM05D007474 ORTHO05D009367 5.8e-31 138.7 246 37.0
MBI16_g28190_MAGBIO Magnolia biondii HOM05D007474 ORTHO05D009367 1.0e-30 137.9 202 42.1
BraA03t14710Z Brassica rapa HOM05D007474 ORTHO05D009367 1.1e-29 134.4 259 36.7
Oeu044666.1 Olea europaea HOM05D007474 ORTHO05D009367 1.2e-28 131.0 198 43.9
PGR142G0563 Punica granatum HOM05D007474 ORTHO05D009367 1.2e-28 131.0 260 38.8
Sabra18G0115300 Salix brachista HOM05D007474 ORTHO05D009367 1.0e-27 127.9 188 42.6
Nitab4.5_0000056g0090 Nicotiana tabacum HOM05D007474 ORTHO05D009367 5.1e-27 125.6 276 35.5
Potri.018G141232 Populus trichocarpa HOM05D007474 ORTHO05D009367 3.3e-26 122.9 126 53.2
AUR62004543 Chenopodium quinoa HOM05D007474 ORTHO05D009367 2.0e-23 113.6 163 46.6
COL.COLO4_06926 Corchorus olitorius HOM05D007474 ORTHO05D009367 2.0e-23 113.6 197 40.1
CSS0031812 Camellia sinensis var. sinensis HOM05D007474 ORTHO05D009367 1.1e-21 107.8 149 47.7
Ca_02115_v3 Cicer arietinum L. HOM05D007474 ORTHO05D009367 1.0e-19 101.3 126 45.2
vmacro20808 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 1.8e-19 100.5 145 45.5
Eucgr.C00103 Eucalyptus grandis HOM05D007474 ORTHO05D009367 7.4e-18 95.1 154 40.9
PGR142G3816 Punica granatum HOM05D007474 ORTHO05D009367 4.1e-16 89.4 121 45.5
Potri.018G141166 Populus trichocarpa HOM05D007474 ORTHO05D009367 3.4e-15 86.3 115 47.0
Hma1.2p1_0140F.1_g063730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 3.8e-14 82.8 117 43.6
Lj4A313T24 Lonicera japonica HOM05D007474 ORTHO05D009367 2.0e-10 70.5 161 35.4
QL04p011351 Quercus lobata HOM05D000009 ORTHO05D000008 9.7e-10 68.2 97 45.4
TWI63G1298 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 4.1e-08 62.8 108 38.0
Mapoly0011s0196 Marchantia polymorpha HOM05D007474 ORTHO05D009367 7.0e-08 62.0 258 25.2
vmacro20809 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 3.4e-07 59.7 55 58.2
SMO364G0168 Selaginella moellendorffii HOM05D007474 ORTHO05D009367 4.5e-07 59.3 243 27.2


User provided reference genes

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