Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0007370 Simmondsia chinensis HOM05D006228 ORTHO05D007847 1.6e-211 739.2 368 100.0
Dinv34431 Davidia involucrata HOM05D006228 ORTHO05D007847 9.9e-134 480.7 373 61.9
Rhsim09G0171700 Rhododendron simsii HOM05D006228 ORTHO05D007847 2.7e-131 472.6 374 61.2
TAR633G1830 Trochodendron aralioides HOM05D006228 ORTHO05D007847 1.0e-130 470.7 374 60.2
Actinidia13913 Actinidia chinensis HOM05D006228 ORTHO05D007847 1.8e-130 469.9 373 61.4
AUR62022833 Chenopodium quinoa HOM05D006228 ORTHO05D007847 5.1e-130 468.4 365 64.7
EL10Ac2g04780 Beta vulgaris HOM05D006228 ORTHO05D007847 1.3e-128 463.8 365 62.5
Nn2g13585 Nelumbo nucifera HOM05D006228 ORTHO05D007847 1.3e-128 463.8 368 60.9
Hund13827 Selenicereus undatus HOM05D006228 ORTHO05D007847 1.3e-128 463.8 422 56.4
Prupe.2G245100 Prunus persica HOM05D006228 ORTHO05D007847 2.1e-128 463.0 373 59.2
Migut.F00709 Erythranthe guttata HOM05D006228 ORTHO05D007847 6.2e-128 461.5 364 62.9
GSVIVG01016380001 Vitis vinifera HOM05D006228 ORTHO05D007847 1.1e-127 460.7 377 59.9
CSS0000174 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 4.0e-127 458.8 373 59.2
CSS0026214 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 5.3e-127 458.4 373 59.5
Haze_17175 Corylus avellana HOM05D006228 ORTHO05D007847 4.5e-126 455.3 373 59.5
Cfa005508 Carpinus fangiana HOM05D006228 ORTHO05D007847 5.8e-126 454.9 373 59.0
CiPaw.01G295100 Carya illinoinensis HOM05D006228 ORTHO05D007847 1.3e-125 453.8 372 59.4
CsaV3_5G008840 Cucumis sativus L. HOM05D006228 ORTHO05D007847 2.2e-125 453.0 372 60.8
MD07G1212900 Malus domestica HOM05D006228 ORTHO05D007847 6.5e-125 451.4 373 59.0
Nitab4.5_0012179g0020 Nicotiana tabacum HOM05D006228 ORTHO05D007847 8.4e-125 451.1 393 59.3
SalBow5G2373 Salvia bowleyana HOM05D006228 ORTHO05D007847 1.4e-124 450.3 370 58.1
SGA_v2.0_scaffold2G01060 Striga asiatica HOM05D006228 ORTHO05D007847 2.5e-124 449.5 369 61.0
TWI09G0225 Tripterygium wilfordii HOM05D006228 ORTHO05D007847 4.2e-124 448.7 368 59.0
PGSC0003DMG400007303 Solanum tuberosum HOM05D006228 ORTHO05D007847 7.1e-124 448.0 363 61.7
Potri.008G063500 Populus trichocarpa HOM05D006228 ORTHO05D007847 1.2e-123 447.2 382 59.2
Oeu006660.1 Olea europaea HOM05D006228 ORTHO05D007847 4.6e-123 445.3 362 63.0
AUR62012200 Chenopodium quinoa HOM05D006228 ORTHO05D007847 1.0e-122 444.1 353 60.6
Manes.10G018500 Manihot esculenta HOM05D006228 ORTHO05D007847 2.5e-121 439.5 376 57.2
MBI14_g08147_MAGBIO Magnolia biondii HOM05D006228 ORTHO05D007847 9.7e-121 437.6 362 60.8
Sopen06g004350 Solanum pennellii HOM05D006228 ORTHO05D007847 9.7e-121 437.6 363 60.3
Solyc06g009690.3 Solanum lycopersicum HOM05D006228 ORTHO05D007847 2.8e-120 436.0 363 59.8
RcHm_v2.0_Chr1g0369221 Rosa chinensis HOM05D006228 ORTHO05D007847 8.2e-120 434.5 367 59.4
ClCG11G010510 Citrullus lanatus HOM05D006228 ORTHO05D007847 1.1e-119 434.1 372 58.9
CAN.G1280.21 Capsicum annuum HOM05D006228 ORTHO05D007847 1.4e-119 433.7 357 60.5
Aqoxy1G00736 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 2.9e-117 426.0 368 57.6
Thecc.10G027500 Theobroma cacao HOM05D006228 ORTHO05D007847 5.0e-117 425.2 369 57.7
Peaxi162Scf00401g00030 Petunia axillaris HOM05D006228 ORTHO05D007847 8.5e-117 424.5 359 60.7
FAN06G4757 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.1e-116 424.1 368 59.0
FAN01G0169 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.9e-116 423.3 368 59.0
Gohir.D06G170400 Gossypium hirsutum HOM05D006228 ORTHO05D007847 5.5e-116 421.8 367 56.7
PSO384G3635 Papaver somniferum HOM05D006228 ORTHO05D007847 9.4e-116 421.0 373 55.5
FAN03G1418 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.2e-115 420.6 359 59.1
THA.LOC104810050 Tarenaya hassleriana HOM05D006228 ORTHO05D007847 1.2e-115 420.6 373 56.3
Nitab4.5_0000278g0180 Nicotiana tabacum HOM05D006228 ORTHO05D007847 1.6e-115 420.2 360 60.3
Sed0002982 Sechium edule HOM05D006228 ORTHO05D007847 1.6e-115 420.2 355 60.8
Gorai.010G199300 Gossypium raimondii HOM05D006228 ORTHO05D007847 2.7e-115 419.5 367 55.9
Aqoxy3G00589 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 1.4e-114 417.2 363 56.7
Psat5g127520 Pisum sativum HOM05D006228 ORTHO05D007847 1.8e-114 416.8 364 55.8
Ah.16g103060 Amaranthus hybridus HOM05D006228 ORTHO05D007847 2.3e-114 416.4 359 58.8
FvH4_7g23870 Fragaria vesca HOM05D006228 ORTHO05D007847 2.3e-114 416.4 370 57.8
Lalb_Chr18g0052781 Lupinus albus HOM05D006228 ORTHO05D007847 3.0e-114 416.0 360 56.7
Cc02_g06990 Coffea canephora HOM05D006228 ORTHO05D007847 1.9e-113 413.3 361 58.7
Ca_17139_v3 Cicer arietinum L. HOM05D006228 ORTHO05D007847 9.7e-113 411.0 362 55.0
Gohir.A06G164900 Gossypium hirsutum HOM05D006228 ORTHO05D007847 1.3e-112 410.6 367 55.6
TPR.G29810 Trifolium pratense HOM05D006228 ORTHO05D007847 2.2e-112 409.8 361 54.3
COL.COLO4_25614 Corchorus olitorius HOM05D006228 ORTHO05D007847 4.8e-112 408.7 367 55.3
MELO3C025144.2 Cucumis melo HOM05D006228 ORTHO05D007847 1.4e-111 407.1 382 56.5
Aa31LG5G19710 Aethionema arabicum HOM05D006228 ORTHO05D007847 4.1e-111 405.6 370 55.1
Thhalv10016686m.g Eutrema salsugineum HOM05D006228 ORTHO05D007847 4.1e-111 405.6 373 55.5
Medtr3g070010 Medicago truncatula HOM05D006228 ORTHO05D007847 4.1e-111 405.6 362 53.9
Sp4g22220 Schrenkiella parvula HOM05D006228 ORTHO05D007847 1.5e-110 403.7 371 53.9
AL4G37490 Arabidopsis lyrata HOM05D006228 ORTHO05D007847 2.0e-110 403.3 362 54.7
Sabra08G0046800 Salix brachista HOM05D006228 ORTHO05D007847 5.9e-110 401.7 376 55.6
Lj1A949T58 Lonicera japonica HOM05D006228 ORTHO05D007847 2.2e-109 399.8 390 53.1
AT2G39910 Arabidopsis thaliana HOM05D006228 ORTHO05D007847 3.8e-109 399.1 367 53.7
BolC3t15036H Brassica oleracea HOM05D006228 ORTHO05D007847 6.5e-109 398.3 364 53.3
C03p26500 Brassica napus HOM05D006228 ORTHO05D007847 8.5e-109 397.9 371 52.6
BraA03t11466Z Brassica rapa HOM05D006228 ORTHO05D007847 5.5e-108 395.2 366 52.7
A03p22360 Brassica napus HOM05D006228 ORTHO05D007847 7.2e-108 394.8 366 52.5
HanXRQChr09g0246891 Helianthus annuus HOM05D006228 ORTHO05D007847 7.2e-108 394.8 367 55.9
SHI03521 Sapria himalayana HOM05D006228 ORTHO05D007847 9.4e-108 394.4 359 54.6
vmacro10067 Vaccinium macrocarpon HOM05D006228 ORTHO05D007847 4.7e-107 392.1 396 53.3
CARHR134830 Cardamine hirsuta HOM05D006228 ORTHO05D007847 1.4e-106 390.6 363 53.7
Hma1.2p1_0026F.1_g016930 Hydrangea macrophylla HOM05D006228 ORTHO05D007847 1.4e-106 390.6 248 71.0
Lj6g0016911 Lotus japonicus HOM05D006228 ORTHO05D007847 1.4e-106 390.6 358 53.4
arahy.Tifrunner.gnm1.ann1.H1F5T1 Arachis hypogaea HOM05D006228 ORTHO05D007847 2.3e-106 389.8 386 51.6
Carub.0004s2204 Capsella rubella HOM05D006228 ORTHO05D007847 3.0e-106 389.4 367 53.7
Glyma.18G031000 Glycine max HOM05D006228 ORTHO05D007847 1.1e-105 387.5 355 54.6
BcaB01g03579 Brassica carinata HOM05D006228 ORTHO05D007847 4.4e-105 385.6 371 51.8
BcaC01g05454 Brassica carinata HOM05D006228 ORTHO05D007847 4.4e-105 385.6 371 52.0
Atru.chr12.264 Acer truncatum HOM05D006228 ORTHO05D007847 9.7e-105 384.4 359 54.3
VMungo1383G2528 Vigna mungo HOM05D006228 ORTHO05D007847 1.4e-103 380.6 364 52.5
Phvul.001G239600 Phaseolus vulgaris HOM05D006228 ORTHO05D007847 2.6e-102 376.3 364 52.2
Lsat_1_v5_gn_9_63220 Lactuca sativa HOM05D006228 ORTHO05D007847 1.0e-101 374.4 371 54.4
arahy.Tifrunner.gnm1.ann1.PGVU2S Arachis hypogaea HOM05D006228 ORTHO05D007847 5.0e-101 372.1 356 52.8
ECA232G3403 Erigeron canadensis HOM05D006228 ORTHO05D007847 5.0e-101 372.1 360 53.9
Duzib106G2031 Durio zibethinus HOM05D006228 ORTHO05D007847 4.7e-99 365.5 367 51.2
DCAR_011778 Daucus carota HOM05D006228 ORTHO05D007847 1.0e-98 364.4 359 54.6
Ciclev10031701m.g Citrus clementina HOM05D006228 ORTHO05D007847 4.4e-97 359.0 363 52.1
ATR0580G418 Amborella trichopoda HOM05D006228 ORTHO05D007847 8.2e-96 354.8 354 49.7
PGR044G0451 Punica granatum HOM05D006228 ORTHO05D007847 1.6e-94 350.5 370 51.4
PSO585G0034 Papaver somniferum HOM05D006228 ORTHO05D007847 1.0e-93 347.8 234 66.2
FAN10G3493 Fragaria x ananassa HOM05D006228 ORTHO05D007847 8.5e-93 344.7 370 51.4
CDE05G2573 Ceratophyllum demersum HOM05D006228 ORTHO05D007847 1.2e-91 340.9 340 50.6
FAN06G0021 Fragaria x ananassa HOM05D006228 ORTHO05D007847 2.0e-89 333.6 318 56.0
Eucgr.J00246 Eucalyptus grandis HOM05D006228 ORTHO05D007847 5.7e-89 332.0 373 49.3
Zm00001eb226270 Zea mays HOM05D006228 ORTHO05D007847 4.8e-88 328.9 357 49.0
unitig_747.g21715 Utricularia gibba HOM05D006228 ORTHO05D007847 2.4e-87 326.6 371 46.9
Os06g0694100 Oryza sativa ssp. japonica HOM05D006228 ORTHO05D007847 1.7e-85 320.5 360 47.8
SEGI_03712 Sequoiadendron giganteum HOM05D006228 ORTHO05D007847 5.4e-79 298.9 367 41.7
Cpa.g.sc19.228 Carica papaya HOM05D006228 ORTHO05D007847 2.5e-60 236.9 243 52.3
BcaC02g07378 Brassica carinata HOM05D006228 ORTHO05D007847 1.2e-59 234.6 255 47.8
HPP92_018568 Vanilla planifolia HOM05D006228 ORTHO05D007847 2.4e-55 220.3 278 43.9
AagrBONN_evm.TU.Sc2ySwM_344.5121 Anthoceros agrestis HOM05D006228 ORTHO05D007847 5.4e-55 219.2 318 39.0
MSTRG.8975 Avicennia marina HOM05D006228 ORTHO05D007847 9.2e-55 218.4 213 54.0
Pp3c11_8050 Physcomitrium patens HOM05D006228 ORTHO05D007847 1.4e-50 204.5 293 37.9
Sed0008304 Sechium edule HOM05D006228 ORTHO05D007847 1.7e-48 197.6 329 41.3
SMO273G0042 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 8.3e-48 195.3 284 38.0
BcaB06g29116 Brassica carinata HOM05D006228 ORTHO05D007847 1.9e-47 194.1 159 57.2
Mapoly0014s0032 Marchantia polymorpha HOM05D006228 ORTHO05D007847 2.4e-47 193.7 313 36.4
Actinidia25353 Actinidia chinensis HOM05D006228 ORTHO05D007847 3.3e-36 156.8 152 52.0
BolC4t28269H Brassica oleracea HOM05D006228 ORTHO05D007847 1.2e-35 154.8 100 66.0
SMO147G0063 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 5.8e-33 146.0 186 39.8
QL08p062537 Quercus lobata HOM05D006228 ORTHO05D007847 3.2e-31 140.2 87 69.0
RcHm_v2.0_Chr2g0110551 Rosa chinensis HOM05D006228 ORTHO05D007847 2.3e-29 134.0 80 71.2
Actinidia00930 Actinidia chinensis HOM05D006228 ORTHO05D007847 4.0e-26 123.2 84 64.3
HPP92_018569 Vanilla planifolia HOM05D006228 ORTHO05D007847 1.9e-23 114.4 80 58.8
RcHm_v2.0_Chr1g0339731 Rosa chinensis HOM05D006228 ORTHO05D007847 3.0e-21 107.1 60 76.7
arahy.Tifrunner.gnm1.ann1.DSNI2G Arachis hypogaea HOM05D002669 ORTHO05D003001 5.8e-17 92.8 58 69.0
arahy.Tifrunner.gnm1.ann1.YTZ5F3 Arachis hypogaea HOM05D006228 ORTHO05D007847 7.6e-17 92.4 58 70.7
MCO16G020 Micromonas commoda HOM05D006228 ORTHO05D007847 4.9e-16 89.7 206 27.2
C04p67680 Brassica napus HOM05D006228 ORTHO05D007847 3.0e-13 80.5 47 72.3
PRCOL_00002967 Prasinoderma coloniale HOM05D006228 ORTHO05D007847 1.5e-09 68.2 186 26.9


User provided reference genes

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