Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0007270 Simmondsia chinensis HOM05D004806 ORTHO05D005397 0.0e+00 1243.0 686 100.0
Hund15980 Selenicereus undatus HOM05D004806 ORTHO05D005397 4.8e-182 642.1 746 53.2
AUR62012206 Chenopodium quinoa HOM05D004806 ORTHO05D005397 1.9e-178 630.2 714 54.8
AUR62022839 Chenopodium quinoa HOM05D004806 ORTHO05D005397 7.2e-178 628.2 718 54.5
Hund13832 Selenicereus undatus HOM05D004806 ORTHO05D005397 8.5e-171 604.7 675 53.3
Dinv20955 Davidia involucrata HOM05D004806 ORTHO05D005397 3.2e-170 602.8 724 53.0
Dinv20988 Davidia involucrata HOM05D004806 ORTHO05D005397 3.2e-170 602.8 724 53.0
Ah.10g036410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 3.0e-168 596.3 697 52.9
Dinv34423 Davidia involucrata HOM05D004806 ORTHO05D005397 3.7e-166 589.3 720 52.2
EL10Ac2g04786 Beta vulgaris HOM05D004806 ORTHO05D005397 1.6e-164 583.9 826 46.1
Actinidia33944 Actinidia chinensis HOM05D004806 ORTHO05D005397 8.8e-160 568.2 662 52.3
Prupe.2G246100 Prunus persica HOM05D004806 ORTHO05D005397 9.8e-159 564.7 675 52.4
CiPaw.01G295700 Carya illinoinensis HOM05D004806 ORTHO05D005397 1.3e-158 564.3 688 51.5
RcHm_v2.0_Chr1g0369401 Rosa chinensis HOM05D004806 ORTHO05D005397 3.7e-158 562.8 694 51.3
Nn2g11386 Nelumbo nucifera HOM05D004806 ORTHO05D005397 5.4e-157 558.9 717 50.1
Ciclev10030877m.g Citrus clementina HOM05D004806 ORTHO05D005397 2.7e-156 556.6 661 53.1
Potri.010G192800 Populus trichocarpa HOM05D004806 ORTHO05D005397 1.3e-155 554.3 676 51.8
FvH4_7g24020 Fragaria vesca HOM05D004806 ORTHO05D005397 5.0e-155 552.4 677 51.0
Duzib106G0751 Durio zibethinus HOM05D004806 ORTHO05D005397 6.5e-155 552.0 655 51.3
Duzib114G0963 Durio zibethinus HOM05D004806 ORTHO05D005397 6.5e-155 552.0 656 51.7
FAN03G1683 Fragaria x ananassa HOM05D004806 ORTHO05D005397 1.9e-154 550.4 677 50.8
CSS0019944 Camellia sinensis var. sinensis HOM05D004806 ORTHO05D005397 3.2e-154 549.7 735 50.1
FAN06G0754 Fragaria x ananassa HOM05D004806 ORTHO05D005397 3.2e-154 549.7 672 51.5
Sc11g0006990 Simmondsia chinensis HOM05D004806 ORTHO05D005397 3.2e-154 549.7 297 97.3
Ah.16g103100 Amaranthus hybridus HOM05D004806 ORTHO05D005397 4.2e-154 549.3 726 48.5
FAN10G3438 Fragaria x ananassa HOM05D004806 ORTHO05D005397 7.2e-154 548.5 677 51.0
QL08p062653 Quercus lobata HOM05D004806 ORTHO05D005397 7.2e-154 548.5 711 49.6
TWI53G0900 Tripterygium wilfordii HOM05D004806 ORTHO05D005397 2.8e-153 546.6 659 51.0
Glyma.14G062000 Glycine max HOM05D004806 ORTHO05D005397 6.1e-153 545.4 657 52.4
Thecc.10G026200 Theobroma cacao HOM05D004806 ORTHO05D005397 1.0e-152 544.7 702 50.0
Gohir.A10G229600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.2e-151 541.2 674 50.4
Gorai.011G280200 Gossypium raimondii HOM05D004806 ORTHO05D005397 4.4e-151 539.3 664 50.8
MD01G1147200 Malus domestica HOM05D004806 ORTHO05D005397 5.7e-151 538.9 716 49.9
Nn2g13619 Nelumbo nucifera HOM05D004806 ORTHO05D005397 9.8e-151 538.1 694 50.9
Gohir.D06G170100 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.7e-150 537.3 602 53.7
Potri.008G064500 Populus trichocarpa HOM05D004806 ORTHO05D005397 1.7e-150 537.3 645 53.6
Gorai.010G199100 Gossypium raimondii HOM05D004806 ORTHO05D005397 2.2e-150 537.0 602 53.7
Gohir.D10G243800 Gossypium hirsutum HOM05D004806 ORTHO05D005397 4.9e-150 535.8 664 50.5
arahy.Tifrunner.gnm1.ann1.76KK00 Arachis hypogaea HOM05D004806 ORTHO05D005397 6.3e-150 535.4 620 52.1
TAR369G0441 Trochodendron aralioides HOM05D004806 ORTHO05D005397 1.1e-149 534.6 690 49.4
Lj1C950G18 Lonicera japonica HOM05D004806 ORTHO05D005397 1.4e-149 534.3 694 48.7
Gohir.A06G164600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 3.1e-149 533.1 653 51.8
VMungo0647G1582 Vigna mungo HOM05D004806 ORTHO05D005397 4.1e-149 532.7 629 52.5
Manes.10G017800 Manihot esculenta HOM05D004806 ORTHO05D005397 7.8e-148 528.5 668 49.9
Sabra08G0047400 Salix brachista HOM05D004806 ORTHO05D005397 1.3e-147 527.7 641 53.4
Actinidia29677 Actinidia chinensis HOM05D004806 ORTHO05D005397 1.7e-147 527.3 686 52.3
Peaxi162Scf00401g00118 Petunia axillaris HOM05D004806 ORTHO05D005397 2.9e-147 526.6 605 52.7
Nitab4.5_0000737g0020 Nicotiana tabacum HOM05D004806 ORTHO05D005397 7.3e-146 521.9 653 49.3
FAN01G2868 Fragaria x ananassa HOM05D004806 ORTHO05D005397 1.6e-145 520.8 727 46.9
Phvul.008G226400 Phaseolus vulgaris HOM05D004806 ORTHO05D005397 6.1e-145 518.8 653 49.8
CiPaw.02G189800 Carya illinoinensis HOM05D004806 ORTHO05D005397 4.0e-144 516.2 672 49.9
PGR142G0174 Punica granatum HOM05D004806 ORTHO05D005397 4.0e-144 516.2 673 48.3
Sed0002029 Sechium edule HOM05D004806 ORTHO05D005397 1.2e-143 514.6 670 49.3
Atru.chr12.242 Acer truncatum HOM05D004806 ORTHO05D005397 3.7e-142 509.6 677 48.9
Nitab4.5_0003720g0010 Nicotiana tabacum HOM05D004806 ORTHO05D005397 4.9e-142 509.2 717 46.2
TPR.G8038 Trifolium pratense HOM05D004806 ORTHO05D005397 6.4e-142 508.8 660 49.2
Medtr5g081880 Medicago truncatula HOM05D004806 ORTHO05D005397 4.6e-140 502.7 611 51.2
Ca_05931_v3 Cicer arietinum L. HOM05D004806 ORTHO05D005397 1.0e-139 501.5 669 49.6
DCAR_027553 Daucus carota HOM05D004806 ORTHO05D005397 3.0e-139 500.0 705 47.4
Psat2g035600 Pisum sativum HOM05D004806 ORTHO05D005397 5.0e-139 499.2 613 50.1
Cc02_g06920 Coffea canephora HOM05D004806 ORTHO05D005397 1.1e-138 498.0 675 47.1
COL.COLO4_25659 Corchorus olitorius HOM05D004806 ORTHO05D005397 1.1e-138 498.0 635 49.1
vmacro06995 Vaccinium macrocarpon HOM05D004806 ORTHO05D005397 1.9e-138 497.3 651 49.8
MBI14_g36885_MAGBIO Magnolia biondii HOM05D004806 ORTHO05D005397 4.3e-138 496.1 712 46.5
MELO3C008275.2 Cucumis melo HOM05D004806 ORTHO05D005397 1.4e-136 491.1 707 45.7
arahy.Tifrunner.gnm1.ann1.13YYB8 Arachis hypogaea HOM05D004806 ORTHO05D005397 1.2e-135 488.0 597 50.1
Lalb_Chr04g0250791 Lupinus albus HOM05D004806 ORTHO05D005397 2.0e-135 487.3 665 47.2
ECA238G2978 Erigeron canadensis HOM05D004806 ORTHO05D005397 1.3e-134 484.6 642 49.4
SalBow6G1361 Salvia bowleyana HOM05D004806 ORTHO05D005397 2.9e-134 483.4 708 46.6
SalBow6G1823 Salvia bowleyana HOM05D004806 ORTHO05D005397 1.9e-133 480.7 708 46.3
Eucgr.G03032 Eucalyptus grandis HOM05D004806 ORTHO05D005397 6.6e-131 472.2 689 45.4
HanXRQChr14g0459971 Helianthus annuus HOM05D004806 ORTHO05D005397 7.3e-130 468.8 657 47.3
Aqoxy4G02663 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 9.5e-130 468.4 674 46.3
LjContig00357g0026481 Lotus japonicus HOM05D004806 ORTHO05D005397 1.1e-128 464.9 669 46.2
THA.LOC104824306 Tarenaya hassleriana HOM05D004806 ORTHO05D005397 1.6e-124 451.1 660 45.6
Lsat_1_v5_gn_2_121900 Lactuca sativa HOM05D004806 ORTHO05D005397 7.8e-124 448.7 657 46.4
PGSC0003DMG400027178 Solanum tuberosum HOM05D004806 ORTHO05D005397 1.3e-123 448.0 591 48.2
Solyc05g052630.4 Solanum lycopersicum HOM05D004806 ORTHO05D005397 5.1e-123 446.0 591 47.7
Sopen05g031160 Solanum pennellii HOM05D004806 ORTHO05D005397 1.1e-122 444.9 591 47.5
Nitab4.5_0004338g0050 Nicotiana tabacum HOM05D004806 ORTHO05D005397 3.4e-119 433.3 577 46.4
Oeu055830.1 Olea europaea HOM05D004806 ORTHO05D005397 2.9e-118 430.3 628 45.9
unitig_52.g16836 Utricularia gibba HOM05D004806 ORTHO05D005397 8.4e-118 428.7 714 43.0
Aa31LG5G19660 Aethionema arabicum HOM05D004806 ORTHO05D005397 1.7e-115 421.0 682 42.4
Migut.F01427 Erythranthe guttata HOM05D004806 ORTHO05D005397 4.3e-114 416.4 679 42.3
PSO801G0450 Papaver somniferum HOM05D004806 ORTHO05D005397 2.1e-113 414.1 699 44.6
HPP92_018194 Vanilla planifolia HOM05D004806 ORTHO05D005397 3.6e-113 413.3 632 44.5
Haze_17182 Corylus avellana HOM05D004806 ORTHO05D005397 9.9e-111 405.2 497 52.3
AT2G39950 Arabidopsis thaliana HOM05D004806 ORTHO05D005397 2.2e-110 404.1 637 46.8
AL4G37530 Arabidopsis lyrata HOM05D004806 ORTHO05D005397 1.4e-109 401.4 631 47.2
CDE02G2339 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 3.2e-109 400.2 629 42.8
Carub.0004s2208 Capsella rubella HOM05D004806 ORTHO05D005397 4.2e-109 399.8 623 46.9
Nitab4.5_0002100g0120 Nicotiana tabacum HOM05D004806 ORTHO05D005397 5.4e-109 399.4 577 44.9
ClCG11G006350 Citrullus lanatus HOM05D004806 ORTHO05D005397 6.6e-107 392.5 565 45.0
CsaV3_6G001640 Cucumis sativus L. HOM05D004806 ORTHO05D005397 1.9e-106 391.0 575 45.4
Thhalv10017559m.g Eutrema salsugineum HOM05D004806 ORTHO05D005397 2.5e-106 390.6 610 48.0
PSO339G2633 Papaver somniferum HOM05D004806 ORTHO05D005397 9.6e-106 388.7 729 42.1
Sp4g22260 Schrenkiella parvula HOM05D004806 ORTHO05D005397 9.6e-106 388.7 659 45.2
Aqoxy2G00978 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 4.0e-104 383.3 563 46.7
BraA05t19615Z Brassica rapa HOM05D004806 ORTHO05D005397 2.7e-100 370.5 579 46.8
C04p07550 Brassica napus HOM05D004806 ORTHO05D005397 4.6e-100 369.8 579 47.8
BolC4t22372H Brassica oleracea HOM05D004806 ORTHO05D005397 4.6e-100 369.8 579 47.8
HanXRQChr08g0222261 Helianthus annuus HOM05D004806 ORTHO05D005397 4.3e-98 363.2 609 42.5
SGA_v2.0_scaffold76G25081 Striga asiatica HOM05D004806 ORTHO05D005397 9.6e-98 362.1 674 41.2
Zm00001eb297980 Zea mays HOM05D004806 ORTHO05D005397 2.1e-97 360.9 505 45.3
HanXRQChr07g0200671 Helianthus annuus HOM05D004806 ORTHO05D005397 8.1e-97 359.0 638 41.2
Lsat_1_v5_gn_8_12421 Lactuca sativa HOM05D004806 ORTHO05D005397 8.4e-94 349.0 570 46.3
SGA_v2.0_scaffold343G49443 Striga asiatica HOM05D004806 ORTHO05D005397 1.1e-90 338.6 554 45.5
Rhsim03G0140100 Rhododendron simsii HOM05D004806 ORTHO05D005397 6.2e-89 332.8 560 43.2
Glyma.02G254400 Glycine max HOM05D004806 ORTHO05D005397 5.8e-87 326.2 473 47.8
Oeu036630.1 Olea europaea HOM05D004806 ORTHO05D005397 2.9e-86 323.9 491 48.9
Sed0010788 Sechium edule HOM05D004806 ORTHO05D005397 3.9e-83 313.5 515 41.2
GSVIVG01016366001 Vitis vinifera HOM05D004806 ORTHO05D005397 9.4e-77 292.4 211 72.0
CARHR134870 Cardamine hirsuta HOM05D004806 ORTHO05D005397 1.3e-73 282.0 487 46.6
Manes.07G125400 Manihot esculenta HOM05D004806 ORTHO05D005397 1.1e-72 278.9 410 48.0
ATR0618G022 Amborella trichopoda HOM05D004806 ORTHO05D005397 5.3e-72 276.6 263 58.9
Lalb_Chr17g0346601 Lupinus albus HOM05D004806 ORTHO05D005397 2.6e-71 274.2 472 41.9
TAR623G1028 Trochodendron aralioides HOM05D004806 ORTHO05D005397 1.3e-65 255.4 600 37.8
CDE09G0712 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 4.5e-63 246.9 202 60.4
AagrBONN_evm.TU.Sc2ySwM_368.289 Anthoceros agrestis HOM05D004806 ORTHO05D005397 1.0e-51 209.1 267 46.1
Mapoly0096s0071 Marchantia polymorpha HOM05D004806 ORTHO05D005397 1.8e-48 198.4 257 46.7
Sc11g0006970 Simmondsia chinensis HOM05D004806 ORTHO05D005397 3.8e-46 190.7 100 99.0
CBR_g37391 Chara braunii HOM05D004806 ORTHO05D005397 2.1e-44 184.9 198 48.0
SHI03525 Sapria himalayana HOM05D004806 ORTHO05D005397 5.7e-42 176.8 418 32.3
Sabra10G0148400 Salix brachista HOM05D004806 ORTHO05D005397 9.8e-42 176.0 160 61.9
Oeu059753.1 Olea europaea HOM05D004806 ORTHO05D005397 1.4e-40 172.2 135 64.4
MD07G1214200 Malus domestica HOM05D004806 ORTHO05D005397 7.7e-39 166.4 120 69.2
TPR.G40368 Trifolium pratense HOM05D004806 ORTHO05D005397 8.6e-38 162.9 130 66.2
SMO358G0301 Selaginella moellendorffii HOM05D004806 ORTHO05D005397 3.6e-36 157.5 170 50.0
Lalb_Chr17g0346611 Lupinus albus HOM05D004806 ORTHO05D005397 5.2e-35 153.7 118 65.3
BcaB02g09066 Brassica carinata HOM05D004806 ORTHO05D005397 9.8e-34 149.4 199 46.2
RcHm_v2.0_Chr1g0369361 Rosa chinensis HOM05D004806 ORTHO05D005397 1.4e-32 145.6 154 54.5
CDE09G1248 Ceratophyllum demersum HOM05D000530 ORTHO05D003341 1.9e-29 135.2 280 37.5
A05p06470 Brassica napus HOM05D004806 ORTHO05D005397 1.2e-26 125.9 87 67.8
SHI03526 Sapria himalayana HOM05D004806 ORTHO05D005397 6.4e-25 120.2 135 47.4
Oeu022381.1 Olea europaea HOM05D004806 ORTHO05D005397 1.2e-23 115.9 105 61.9
Haze_17183 Corylus avellana HOM05D004806 ORTHO05D005397 4.6e-23 114.0 83 66.3
ATR0618G087 Amborella trichopoda HOM05D004806 ORTHO05D005397 7.8e-23 113.2 167 44.3
AagrBONN_evm.TU.Sc2ySwM_369.624 Anthoceros agrestis HOM05D004806 ORTHO05D005397 2.3e-22 111.7 138 47.8
Os07g0100500 Oryza sativa ssp. japonica HOM05D004806 ORTHO05D005397 2.3e-22 111.7 74 70.3
Zm00001eb057510 Zea mays HOM05D004806 ORTHO05D005397 9.8e-18 96.3 73 64.4
SalBow6G4818 Salvia bowleyana HOM05D004806 ORTHO05D005397 5.4e-16 90.5 95 51.6
ATR0723G011 Amborella trichopoda HOM05D004806 ORTHO05D005397 4.6e-15 87.4 72 59.7
Oeu043075.1 Olea europaea HOM05D004806 ORTHO05D005397 3.9e-14 84.3 139 42.4
Pp3c26_8620 Physcomitrium patens HOM05D004806 ORTHO05D005397 1.2e-12 79.3 88 46.6
CAN.G853.43 Capsicum annuum HOM05D004806 ORTHO05D005397 2.1e-12 78.6 48 77.1
Ah.05g175410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 4.4e-10 70.9 55 63.6
RcHm_v2.0_Chr1g0313541 Rosa chinensis HOM05D004806 ORTHO05D005397 7.1e-08 63.5 60 56.7
Oeu021121.1 Olea europaea HOM05D004806 ORTHO05D005397 1.6e-07 62.4 42 61.9


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