Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0007250 Simmondsia chinensis HOM05D007615 ORTHO05D009643 2.6e-110 402.1 209 100.0
Potri.010G192300 Populus trichocarpa HOM05D007615 ORTHO05D009643 4.1e-52 208.8 197 52.3
Sabra10G0147900 Salix brachista HOM05D007615 ORTHO05D009643 9.2e-52 207.6 197 51.8
EL10Ac2g04791 Beta vulgaris HOM05D007615 ORTHO05D009643 4.6e-51 205.3 143 67.8
Sed0010184 Sechium edule HOM05D007615 ORTHO05D009643 6.0e-51 204.9 196 56.1
TAR636G2052 Trochodendron aralioides HOM05D007615 ORTHO05D009643 6.0e-51 204.9 202 51.5
TAR636G3510 Trochodendron aralioides HOM05D007615 ORTHO05D009643 1.7e-50 203.4 198 51.5
TWI53G1973 Tripterygium wilfordii HOM05D007615 ORTHO05D009643 2.3e-50 203.0 196 54.6
ClCG11G006310 Citrullus lanatus HOM05D007615 ORTHO05D009643 3.9e-50 202.2 187 56.7
MELO3C008283.2 Cucumis melo HOM05D007615 ORTHO05D009643 8.6e-50 201.1 198 56.1
CiPaw.01G296100 Carya illinoinensis HOM05D007615 ORTHO05D009643 2.5e-49 199.5 197 54.3
CsaV3_6G001660 Cucumis sativus L. HOM05D007615 ORTHO05D009643 7.3e-49 198.0 197 53.8
CANSAT56G1044 Cannabis sativa HOM05D007615 ORTHO05D009643 9.5e-49 197.6 201 49.3
Ah.16g103150 Amaranthus hybridus HOM05D007615 ORTHO05D009643 2.1e-48 196.4 177 56.5
Lalb_Chr17g0346631 Lupinus albus HOM05D007615 ORTHO05D009643 3.6e-48 195.7 194 52.6
Phvul.008G225800 Phaseolus vulgaris HOM05D007615 ORTHO05D009643 8.1e-48 194.5 192 53.6
QL08p062684 Quercus lobata HOM05D007615 ORTHO05D009643 1.8e-47 193.4 198 52.5
Haze_17188 Corylus avellana HOM05D007615 ORTHO05D009643 3.1e-47 192.6 190 54.2
COL.COLO4_24429 Corchorus olitorius HOM05D007615 ORTHO05D009643 6.8e-47 191.4 197 50.8
LjContig00357g0021515 Lotus japonicus HOM05D007615 ORTHO05D009643 6.8e-47 191.4 201 51.7
Cfa001360 Carpinus fangiana HOM05D007615 ORTHO05D009643 8.9e-47 191.0 135 68.9
PSO384G4204 Papaver somniferum HOM05D007615 ORTHO05D009643 4.4e-46 188.7 209 49.8
Eucgr.K02662 Eucalyptus grandis HOM05D007615 ORTHO05D009643 9.9e-46 187.6 192 50.0
Glyma.14G061700 Glycine max HOM05D007615 ORTHO05D009643 9.9e-46 187.6 199 51.3
Psat2g035440 Pisum sativum HOM05D007615 ORTHO05D009643 9.9e-46 187.6 197 50.3
Dinv20960 Davidia involucrata HOM05D000277 ORTHO05D000214 1.3e-45 187.2 167 54.5
Dinv20983 Davidia involucrata HOM05D000277 ORTHO05D000214 1.3e-45 187.2 167 54.5
Atru.chr12.235 Acer truncatum HOM05D007615 ORTHO05D009643 2.2e-45 186.4 189 52.9
Ciclev10032806m.g Citrus clementina HOM05D007615 ORTHO05D009643 2.2e-45 186.4 194 50.0
Thecc.09G179400 Theobroma cacao HOM05D007615 ORTHO05D009643 2.2e-45 186.4 198 49.5
VMungo0647G1713 Vigna mungo HOM05D007615 ORTHO05D009643 2.2e-45 186.4 181 54.1
ECA238G0429 Erigeron canadensis HOM05D007615 ORTHO05D009643 2.9e-45 186.0 191 50.3
Manes.07G125900 Manihot esculenta HOM05D007615 ORTHO05D009643 2.9e-45 186.0 147 60.5
CSS0034825 Camellia sinensis var. sinensis HOM05D007615 ORTHO05D009643 3.8e-45 185.7 168 57.1
Ca_05936_v3 Cicer arietinum L. HOM05D007615 ORTHO05D009643 2.4e-44 183.0 200 49.5
Medtr5g081970 Medicago truncatula HOM05D007615 ORTHO05D009643 3.2e-44 182.6 199 49.2
FAN01G2468 Fragaria x ananassa HOM05D007615 ORTHO05D009643 4.2e-44 182.2 175 54.9
PSO339G1281 Papaver somniferum HOM05D007615 ORTHO05D009643 5.4e-44 181.8 206 49.5
Gohir.A08G018800 Gossypium hirsutum HOM05D007615 ORTHO05D009643 9.2e-44 181.0 191 48.7
Gohir.D08G029400 Gossypium hirsutum HOM05D007615 ORTHO05D009643 9.2e-44 181.0 201 47.3
FAN06G4073 Fragaria x ananassa HOM05D007615 ORTHO05D009643 1.2e-43 180.6 168 56.0
Rhsim09G0172300 Rhododendron simsii HOM05D007615 ORTHO05D009643 1.6e-43 180.3 202 46.5
FAN10G2819 Fragaria x ananassa HOM05D007615 ORTHO05D009643 2.1e-43 179.9 175 54.3
MD07G1214900 Malus domestica HOM05D007615 ORTHO05D009643 2.1e-43 179.9 186 52.7
RcHm_v2.0_Chr1g0369501 Rosa chinensis HOM05D007615 ORTHO05D009643 2.1e-43 179.9 183 53.0
vmacro10061 Vaccinium macrocarpon HOM05D007615 ORTHO05D009643 2.7e-43 179.5 189 48.7
DCAR_012632 Daucus carota HOM05D007615 ORTHO05D009643 4.6e-43 178.7 141 62.4
Gorai.004G026800 Gossypium raimondii HOM05D007615 ORTHO05D009643 4.6e-43 178.7 201 46.8
Cpa.g.sc19.199 Carica papaya HOM05D007615 ORTHO05D009643 6.0e-43 178.3 192 50.5
Hund13833 Selenicereus undatus HOM05D007615 ORTHO05D009643 6.0e-43 178.3 177 54.2
Actinidia00935 Actinidia chinensis HOM05D007615 ORTHO05D009643 7.8e-43 177.9 193 49.2
Aqoxy4G02652 Aquilegia oxysepala HOM05D007615 ORTHO05D009643 7.8e-43 177.9 207 50.2
HanXRQChr07g0202461 Helianthus annuus HOM05D007615 ORTHO05D009643 1.7e-42 176.8 204 47.5
PGR142G0690 Punica granatum HOM05D007615 ORTHO05D009643 2.3e-42 176.4 198 47.0
Cc02_g06860 Coffea canephora HOM05D007615 ORTHO05D009643 3.0e-42 176.0 201 47.3
Duzib170G1068 Durio zibethinus HOM05D007615 ORTHO05D009643 3.0e-42 176.0 175 51.4
Prupe.2G246900 Prunus persica HOM05D007615 ORTHO05D009643 3.9e-42 175.6 187 54.5
FAN03G2533 Fragaria x ananassa HOM05D007615 ORTHO05D009643 1.5e-41 173.7 175 53.7
PGSC0003DMG400016017 Solanum tuberosum HOM05D007615 ORTHO05D009643 4.3e-41 172.2 195 45.6
Sopen04g004760 Solanum pennellii HOM05D007615 ORTHO05D009643 2.1e-40 169.9 195 46.2
TPR.G19858 Trifolium pratense HOM05D007615 ORTHO05D009643 8.1e-40 167.9 211 46.0
Nn2g11402 Nelumbo nucifera HOM05D007615 ORTHO05D009643 5.3e-39 165.2 193 47.2
Psat3g208000 Pisum sativum HOM05D007615 ORTHO05D009643 6.9e-39 164.9 136 57.4
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 2.6e-38 162.9 202 42.1
Lsat_1_v5_gn_2_121681 Lactuca sativa HOM05D000277 ORTHO05D000214 7.6e-38 161.4 169 47.9
Nitab4.5_0000737g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 8.4e-37 157.9 142 57.7
Oeu063511.1 Olea europaea HOM05D007615 ORTHO05D009643 8.4e-37 157.9 139 56.1
Nitab4.5_0001654g0050 Nicotiana tabacum HOM05D007615 ORTHO05D009643 1.6e-35 153.7 194 45.9
SGA_v2.0_scaffold456G51922 Striga asiatica HOM05D002401 ORTHO05D007109 3.3e-33 146.0 179 46.4
AT3G55820 Arabidopsis thaliana HOM05D007615 ORTHO05D009643 4.8e-32 142.1 207 40.1
SalBow6G0125 Salvia bowleyana HOM05D007615 ORTHO05D009643 4.8e-32 142.1 181 46.4
Migut.F01421 Erythranthe guttata HOM05D007615 ORTHO05D009643 1.4e-31 140.6 184 45.1
RcHm_v2.0_Chr3g0468601 Rosa chinensis HOM05D007615 ORTHO05D009643 1.4e-31 140.6 188 46.3
AL5G37110 Arabidopsis lyrata HOM05D007615 ORTHO05D009643 3.1e-31 139.4 205 40.5
Potri.008G065101 Populus trichocarpa HOM05D007615 ORTHO05D009643 3.1e-31 139.4 139 51.1
CDE10G1314 Ceratophyllum demersum HOM05D007615 ORTHO05D009643 2.6e-30 136.3 136 48.5
Sp5g06670 Schrenkiella parvula HOM05D007615 ORTHO05D009643 2.6e-30 136.3 145 46.9
Aa31LG10G10810 Aethionema arabicum HOM05D007615 ORTHO05D009643 3.4e-30 136.0 189 43.4
CARHR165930 Cardamine hirsuta HOM05D007615 ORTHO05D009643 1.3e-29 134.0 209 39.7
unitig_62.g23933 Utricularia gibba HOM05D007615 ORTHO05D009643 2.2e-29 133.3 187 42.8
THA.LOC104810077 Tarenaya hassleriana HOM05D007615 ORTHO05D009643 6.4e-29 131.7 206 38.3
Peaxi162Scf00079g00249 Petunia axillaris HOM05D007615 ORTHO05D009643 8.4e-29 131.3 117 56.4
A09p48810 Brassica napus HOM05D007615 ORTHO05D009643 1.1e-28 131.0 139 50.4
BraA09t40334Z Brassica rapa HOM05D007615 ORTHO05D009643 1.1e-28 131.0 139 50.4
Thhalv10010736m.g Eutrema salsugineum HOM05D007615 ORTHO05D009643 5.4e-28 128.6 201 39.3
SGA_v2.0_scaffold304G47925 Striga asiatica HOM05D002401 ORTHO05D007109 1.2e-27 127.5 170 44.1
Carub.0005s2260 Capsella rubella HOM05D007615 ORTHO05D009643 2.7e-27 126.3 207 39.1
BolC8t50735H Brassica oleracea HOM05D007615 ORTHO05D009643 3.5e-27 125.9 187 40.6
C08p31140 Brassica napus HOM05D007615 ORTHO05D009643 6.0e-27 125.2 187 40.6
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 7.9e-27 124.8 130 51.5
SEGI_38309 Sequoiadendron giganteum HOM05D007615 ORTHO05D009643 1.9e-25 120.2 201 40.3
HPP92_006631 Vanilla planifolia HOM05D007615 ORTHO05D009643 2.5e-25 119.8 136 45.6
Dinv34419 Davidia involucrata HOM05D007615 ORTHO05D009643 9.6e-25 117.9 196 38.3
BcaB01g00059 Brassica carinata HOM05D007615 ORTHO05D009643 2.5e-20 103.2 187 37.4
Nitab4.5_0002613g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 9.6e-17 91.3 78 60.3
Mapoly0011s0100 Marchantia polymorpha HOM05D007615 ORTHO05D009643 1.3e-16 90.9 161 34.2
Oeu046579.1 Olea europaea HOM05D007615 ORTHO05D009643 2.4e-15 86.7 121 41.3
Manes.10G016915 Manihot esculenta HOM05D007615 ORTHO05D009643 9.0e-15 84.7 120 41.7
Pp3c3_19950 Physcomitrium patens HOM05D007615 ORTHO05D009643 7.6e-14 81.6 155 31.6
SMO139G0141 Selaginella moellendorffii HOM05D007615 ORTHO05D009643 2.9e-13 79.7 185 34.6
SMO145G0032 Selaginella moellendorffii HOM05D001529 ORTHO05D007595 2.9e-13 79.7 185 34.6
AagrBONN_evm.TU.Sc2ySwM_368.2678 Anthoceros agrestis HOM05D007615 ORTHO05D009643 1.6e-08 63.9 233 27.0


User provided reference genes

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