Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 3.9e-55 218.0 119 100.0
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 5.0e-26 121.3 105 61.0
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 2.5e-25 119.0 116 62.1
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 3.2e-25 118.6 118 63.6
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 5.5e-25 117.9 114 61.4
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 1.6e-24 116.3 115 60.0
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 2.7e-24 115.5 113 57.5
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 3.5e-24 115.2 115 58.3
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 3.5e-24 115.2 114 61.4
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 6.1e-24 114.4 110 57.3
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 1.0e-23 113.6 111 55.9
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 2.3e-23 112.5 110 60.9
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 3.0e-23 112.1 115 57.4
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 3.9e-23 111.7 113 56.6
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 3.9e-23 111.7 117 57.3
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 5.1e-23 111.3 109 61.5
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 5.1e-23 111.3 116 60.3
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 8.7e-23 110.5 117 56.4
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 1.1e-22 110.2 113 57.5
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 1.1e-22 110.2 117 56.4
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 1.9e-22 109.4 109 59.6
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 2.5e-22 109.0 115 56.5
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 2.5e-22 109.0 112 58.9
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 2.5e-22 109.0 105 62.9
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 3.3e-22 108.6 113 54.9
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 7.4e-22 107.5 113 57.5
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 1.6e-21 106.3 114 59.6
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 1.6e-21 106.3 110 55.5
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 2.2e-21 105.9 106 63.2
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 2.8e-21 105.5 109 56.0
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 2.8e-21 105.5 104 60.6
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 3.7e-21 105.1 112 53.6
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 3.7e-21 105.1 85 63.5
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 3.7e-21 105.1 114 57.0
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 3.7e-21 105.1 114 57.0
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 4.8e-21 104.8 114 57.0
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 4.8e-21 104.8 114 57.0
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 4.8e-21 104.8 113 57.5
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 4.8e-21 104.8 114 56.1
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 8.2e-21 104.0 113 53.1
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 1.1e-20 103.6 71 70.4
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 1.1e-20 103.6 116 54.3
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 1.1e-20 103.6 114 57.0
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 1.1e-20 103.6 113 53.1
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 1.4e-20 103.2 112 50.9
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 1.4e-20 103.2 68 70.6
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 1.8e-20 102.8 110 58.2
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 1.8e-20 102.8 114 51.8
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 1.8e-20 102.8 114 55.3
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 1.8e-20 102.8 108 56.5
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 2.4e-20 102.4 114 52.6
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 2.4e-20 102.4 113 53.1
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 3.1e-20 102.1 109 56.9
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 3.1e-20 102.1 109 55.0
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 4.1e-20 101.7 110 58.2
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 5.3e-20 101.3 116 51.7
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 5.3e-20 101.3 115 53.9
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 6.9e-20 100.9 115 51.3
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 6.9e-20 100.9 117 52.1
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 9.0e-20 100.5 97 59.8
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 9.0e-20 100.5 113 52.2
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 9.0e-20 100.5 113 52.2
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 9.0e-20 100.5 113 51.3
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 1.2e-19 100.1 100 58.0
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 1.5e-19 99.8 63 73.0
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 2.6e-19 99.0 115 51.3
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 2.6e-19 99.0 70 65.7
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 5.9e-19 97.8 115 52.2
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 5.9e-19 97.8 110 55.5
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 7.7e-19 97.4 112 56.2
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 7.7e-19 97.4 117 53.8
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.0e-18 97.1 61 73.8
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 1.0e-18 97.1 102 60.8
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 1.3e-18 96.7 111 54.1
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 1.7e-18 96.3 109 52.3
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 1.7e-18 96.3 60 75.0
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 3.8e-18 95.1 101 55.4
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 3.8e-18 95.1 114 53.5
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 8.5e-18 94.0 113 52.2
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 8.5e-18 94.0 113 49.6
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 1.1e-17 93.6 67 65.7
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 1.4e-17 93.2 115 50.4
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 1.4e-17 93.2 107 54.2
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 1.9e-17 92.8 100 58.0
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 2.5e-17 92.4 108 51.9
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 3.2e-17 92.0 110 53.6
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 4.2e-17 91.7 108 51.9
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 5.5e-17 91.3 136 49.3
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 9.4e-17 90.5 98 56.1
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 1.2e-16 90.1 114 50.0
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 2.1e-16 89.4 116 49.1
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 2.1e-16 89.4 119 52.9
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 4.6e-16 88.2 64 67.2
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 4.6e-16 88.2 64 67.2
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 1.0e-15 87.0 70 61.4
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 5.1e-15 84.7 60 63.3
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 6.7e-15 84.3 67 56.7
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 3.3e-14 82.0 83 56.6
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 4.3e-14 81.6 120 48.3
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 1.3e-13 80.1 88 59.1
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 8.2e-13 77.4 115 44.3
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 1.1e-12 77.0 111 45.9
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 1.1e-12 77.0 115 46.1
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 3.1e-12 75.5 83 53.0
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 1.2e-11 73.6 102 48.0
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 3.4e-11 72.0 113 43.4
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 4.5e-11 71.6 129 42.6
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 5.9e-11 71.2 113 44.2
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 5.9e-11 71.2 112 42.9
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 9.4e-09 63.9 107 42.1
Pp3c15_12810 Physcomitrium patens HOM05D007113 ORTHO05D008859 4.4e-06 55.1 102 38.2


User provided reference genes

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