Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0007070 Simmondsia chinensis HOM05D009209 ORTHO05D011705 3.3e-118 428.3 208 100.0
Sc15g0000710 Simmondsia chinensis HOM05D009209 ORTHO05D011705 7.5e-38 161.4 177 53.7
Sc15g0001330 Simmondsia chinensis HOM05D009209 ORTHO05D011705 3.4e-30 136.0 110 57.3
Sc21g0004040 Simmondsia chinensis HOM05D009209 ORTHO05D011705 3.4e-30 136.0 110 56.4
Sc15g0003580 Simmondsia chinensis HOM05D009209 ORTHO05D011705 3.2e-28 129.4 102 58.8
Sc17g0002300 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.2e-27 127.5 131 48.9
Sc17g0002350 Simmondsia chinensis HOM05D009209 ORTHO05D011705 6.0e-27 125.2 105 54.3
Sc14g0002520 Simmondsia chinensis HOM05D009209 ORTHO05D011705 9.6e-25 117.9 154 40.3
Sc03g0004450 Simmondsia chinensis HOM05D009209 ORTHO05D011705 4.7e-24 115.5 114 50.0
Sc03g0004550 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.8e-23 113.6 114 48.2
vmacro00512 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 7.6e-14 81.6 114 36.0
Rhsim09G0140400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.3e-13 80.9 117 33.3
CSS0000615 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 5.4e-12 75.5 106 35.8
CSS0025340 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 5.4e-12 75.5 106 35.8
CSS0042161 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 5.4e-12 75.5 106 35.8
Sc15g0000880 Simmondsia chinensis HOM05D009209 ORTHO05D011705 9.3e-12 74.7 56 55.4
Sc01g0007590 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.6e-11 73.9 54 53.7
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.0e-10 71.2 112 34.8
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.3e-10 70.9 112 34.8
RhsimUnG0101100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.3e-10 70.9 103 35.9
vmacro01896 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 1.3e-10 70.9 96 37.5
vmacro12106 Vaccinium macrocarpon HOM05D000081 ORTHO05D009356 1.3e-10 70.9 122 30.3
vmacro23283 Vaccinium macrocarpon HOM05D000163 ORTHO05D009356 1.3e-10 70.9 97 34.0
Rhsim07G0230400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.8e-10 70.5 167 27.5
Actinidia34556 Actinidia chinensis HOM05D008219 ORTHO05D009356 3.9e-10 69.3 107 35.5
CSS0004424 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 5.1e-10 68.9 95 33.7
RhsimUnG0200600 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.1e-10 68.9 107 35.5
arahy.Tifrunner.gnm1.ann1.2029P5 Arachis hypogaea HOM05D012808 ORTHO05D011705 1.1e-09 67.8 93 35.5
vmacro22723 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 3.3e-09 66.2 73 42.5
Rhsim11G0150800 Rhododendron simsii HOM05D012808 ORTHO05D009356 4.3e-09 65.9 119 29.4
vmacro06592 Vaccinium macrocarpon HOM05D000211 ORTHO05D002285 1.6e-08 63.9 120 30.0
EL10Ac7g16632 Beta vulgaris HOM05D008976 ORTHO05D011121 2.1e-08 63.5 155 26.5
Lalb_Chr23g0272311 Lupinus albus HOM05D002777 ORTHO05D001516 2.1e-08 63.5 134 25.4
vmacro21269 Vaccinium macrocarpon HOM05D005003 ORTHO05D006220 2.1e-08 63.5 116 31.0
Actinidia26692 Actinidia chinensis HOM05D008219 ORTHO05D009356 2.8e-08 63.2 82 37.8
Lalb_Chr23g0273581 Lupinus albus HOM05D002777 ORTHO05D001516 2.8e-08 63.2 103 33.0
Sc02g0007500 Simmondsia chinensis HOM05D009209 ORTHO05D011705 2.8e-08 63.2 37 64.9
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 2.8e-08 63.2 120 27.5
Lj4g0027037 Lotus japonicus HOM05D002777 ORTHO05D001516 3.7e-08 62.8 121 28.1
CSS0042776 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 1.1e-07 61.2 101 33.7
Rhsim07G0052100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.1e-07 61.2 56 46.4
Sc14g0002620 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.1e-07 61.2 42 57.1
Rhsim02G0177400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.4e-07 60.8 87 32.2
Medtr7g108760 Medicago truncatula HOM05D008558 ORTHO05D000006 1.8e-07 60.5 94 31.9
Medtr8g058470 Medicago truncatula HOM05D008558 ORTHO05D000006 1.8e-07 60.5 94 31.9
Rhsim04G0141400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.4e-07 60.1 92 35.9
Rhsim11G0140400 Rhododendron simsii HOM05D000026 ORTHO05D009356 2.4e-07 60.1 92 35.9
RhsimUnG0239600 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.1e-07 59.7 74 40.5
Sc23g0004060 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.1e-07 59.7 81 35.8
Rhsim02G0045800 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.0e-07 59.3 162 26.5
Sc16g0001350 Simmondsia chinensis HOM05D009348 ORTHO05D010856 4.0e-07 59.3 86 31.4
Rhsim08G0178600 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.3e-07 58.9 152 28.9
Actinidia36659 Actinidia chinensis HOM05D012898 ORTHO05D009356 6.9e-07 58.5 52 50.0
Phvul.008G195328 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.9e-07 58.5 85 30.6
Lj5g0007242 Lotus japonicus HOM05D002777 ORTHO05D001516 9.0e-07 58.2 88 33.0
Sc13g0007440 Simmondsia chinensis HOM05D009348 ORTHO05D010856 9.0e-07 58.2 97 30.9
Rhsim04G0090900 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.2e-06 57.8 92 35.9
Glyma.13G027700 Glycine max HOM05D002777 ORTHO05D001516 2.6e-06 56.6 93 23.7
Ah.01g013230 Amaranthus hybridus HOM05D008762 ORTHO05D011252 4.5e-06 55.8 131 25.2
Phvul.004G125000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 4.5e-06 55.8 85 30.6
Gorai.002G084400 Gossypium raimondii HOM05D000003 ORTHO05D015081 5.8e-06 55.5 121 25.6
Psat2g179480 Pisum sativum HOM05D016635 ORTHO05D001516 5.8e-06 55.5 156 25.6
Sc13g0006150 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.8e-06 55.5 103 29.1
Potri.003G014056 Populus trichocarpa HOM05D002777 ORTHO05D001516 7.6e-06 55.1 84 28.6
Sc02g0007350 Simmondsia chinensis HOM05D011136 ORTHO05D010856 7.6e-06 55.1 86 32.6
Sc18g0002450 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.6e-06 55.1 81 32.1
vmacro09750 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 9.9e-06 54.7 51 45.1


User provided reference genes

Program Settings