Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0006920 Simmondsia chinensis HOM05D002474 ORTHO05D006727 7.8e-280 966.5 482 100.0
Nn4g23008 Nelumbo nucifera HOM05D002474 ORTHO05D006727 2.6e-190 669.1 473 70.0
QL02p080225 Quercus lobata HOM05D002474 ORTHO05D006727 5.6e-185 651.4 465 68.8
Atru.chr8.2476 Acer truncatum HOM05D002474 ORTHO05D006727 7.3e-185 651.0 467 68.5
GSVIVG01032597001 Vitis vinifera HOM05D002474 ORTHO05D006727 4.7e-184 648.3 458 70.1
Hma1.2p1_0449F.1_g154950 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 1.1e-183 647.1 421 75.3
Thecc.09G254500 Theobroma cacao HOM05D002474 ORTHO05D006727 2.3e-183 646.0 445 70.6
FvH4_6g49390 Fragaria vesca HOM05D002474 ORTHO05D006727 9.8e-182 640.6 466 67.4
MELO3C021965.2 Cucumis melo HOM05D002474 ORTHO05D006727 2.2e-181 639.4 433 71.8
CsaV3_5G037800 Cucumis sativus L. HOM05D002474 ORTHO05D006727 2.9e-181 639.0 423 73.5
CSS0021046 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 1.9e-180 636.3 411 75.7
HanXRQChr17g0547501 Helianthus annuus HOM05D002474 ORTHO05D006727 9.2e-180 634.0 446 69.3
Ciclev10011620m.g Citrus clementina HOM05D002474 ORTHO05D006727 2.7e-179 632.5 443 70.4
Gorai.013G255100 Gossypium raimondii HOM05D002474 ORTHO05D006727 2.7e-179 632.5 421 72.9
RcHm_v2.0_Chr2g0169251 Rosa chinensis HOM05D002474 ORTHO05D006727 3.5e-179 632.1 452 68.6
ECA246G0556 Erigeron canadensis HOM05D002474 ORTHO05D006727 1.0e-178 630.6 451 68.7
Migut.K01338 Erythranthe guttata HOM05D002474 ORTHO05D006727 3.0e-178 629.0 436 70.9
Eucgr.J02138 Eucalyptus grandis HOM05D002474 ORTHO05D006727 6.6e-178 627.9 442 69.5
Gohir.A13G220300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 2.5e-177 625.9 421 72.2
Sopen02g016630 Solanum pennellii HOM05D002474 ORTHO05D006727 3.3e-177 625.5 467 67.5
TPR.G4252 Trifolium pratense HOM05D002474 ORTHO05D006727 4.3e-177 625.2 424 70.3
Solyc02g067480.3 Solanum lycopersicum HOM05D002474 ORTHO05D006727 1.2e-176 623.6 453 68.9
Phvul.004G025500 Phaseolus vulgaris HOM05D002474 ORTHO05D006727 3.6e-176 622.1 435 68.0
CAN.G1128.5 Capsicum annuum HOM05D002474 ORTHO05D006727 6.2e-176 621.3 437 69.8
Lsat_1_v5_gn_3_102300 Lactuca sativa HOM05D002474 ORTHO05D006727 6.2e-176 621.3 440 69.3
Psat1g077640 Pisum sativum HOM05D002474 ORTHO05D006727 1.4e-175 620.2 422 69.9
Aqoxy3G00804 Aquilegia oxysepala HOM05D002474 ORTHO05D006727 1.8e-175 619.8 412 73.1
Nitab4.5_0006062g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 3.1e-175 619.0 468 65.8
Medtr6g011270 Medicago truncatula HOM05D002474 ORTHO05D006727 4.0e-175 618.6 424 70.0
Hund13252 Selenicereus undatus HOM05D002474 ORTHO05D006727 6.8e-175 617.8 536 60.4
Oeu033341.3 Olea europaea HOM05D002474 ORTHO05D006727 8.9e-175 617.5 488 63.7
PSO478G4089 Papaver somniferum HOM05D002474 ORTHO05D006727 4.4e-174 615.1 414 71.3
PGSC0003DMG400006940 Solanum tuberosum HOM05D002474 ORTHO05D006727 4.4e-174 615.1 453 67.5
TAR629G1594 Trochodendron aralioides HOM05D002474 ORTHO05D006727 7.5e-174 614.4 413 72.6
Potri.004G130000 Populus trichocarpa HOM05D002474 ORTHO05D006727 2.2e-173 612.8 413 71.9
Ca_04259_v3 Cicer arietinum L. HOM05D002474 ORTHO05D006727 3.7e-173 612.1 461 64.6
Nitab4.5_0002699g0040 Nicotiana tabacum HOM05D002474 ORTHO05D006727 5.4e-172 608.2 412 71.4
arahy.Tifrunner.gnm1.ann1.B2F8E8 Arachis hypogaea HOM05D002474 ORTHO05D006727 4.6e-171 605.1 456 65.1
Gohir.D13G224300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 6.0e-171 604.7 430 70.0
RhsimUnG0054500 Rhododendron simsii HOM05D002474 ORTHO05D006727 7.8e-171 604.4 485 64.1
Lalb_Chr06g0175531 Lupinus albus HOM05D002474 ORTHO05D006727 2.3e-170 602.8 445 63.8
unitig_748.g8621 Utricularia gibba HOM05D002474 ORTHO05D006727 3.0e-170 602.4 437 66.6
EL10Ac2g02929 Beta vulgaris HOM05D002474 ORTHO05D006727 6.6e-170 601.3 452 66.4
CARHR262240 Cardamine hirsuta HOM05D002474 ORTHO05D006727 6.6e-170 601.3 425 67.5
CiPaw.04G020500 Carya illinoinensis HOM05D002474 ORTHO05D006727 1.5e-169 600.1 478 64.6
PSO161G0033 Papaver somniferum HOM05D002474 ORTHO05D006727 2.5e-169 599.4 414 69.8
Ah.12g065360 Amaranthus hybridus HOM05D002474 ORTHO05D006727 9.5e-169 597.4 446 66.8
Carub.0007s3579 Capsella rubella HOM05D002474 ORTHO05D006727 9.5e-169 597.4 442 65.2
AL7G50200 Arabidopsis lyrata HOM05D002474 ORTHO05D006727 1.6e-168 596.7 461 63.1
THA.LOC104805441 Tarenaya hassleriana HOM05D002474 ORTHO05D006727 1.4e-167 593.6 443 65.7
Cfa007503 Carpinus fangiana HOM05D002474 ORTHO05D006727 5.2e-167 591.7 500 61.8
AUR62031654 Chenopodium quinoa HOM05D002474 ORTHO05D006727 6.8e-167 591.3 448 66.5
AT5G39940 Arabidopsis thaliana HOM05D002474 ORTHO05D006727 2.2e-165 586.3 462 62.6
Lj2g0026556 Lotus japonicus HOM05D002474 ORTHO05D006727 1.4e-164 583.6 411 67.6
CDE08G1502 Ceratophyllum demersum HOM05D002474 ORTHO05D006727 1.9e-164 583.2 424 65.3
Os12g0638800 Oryza sativa ssp. japonica HOM05D002474 ORTHO05D006727 7.1e-164 581.3 434 65.0
BraA04t16928Z Brassica rapa HOM05D002474 ORTHO05D006727 1.2e-163 580.5 424 66.0
PGR083G0251 Punica granatum HOM05D002474 ORTHO05D006727 2.1e-163 579.7 425 67.5
Duzib168G1861 Durio zibethinus HOM05D002474 ORTHO05D006727 2.7e-163 579.3 407 69.3
COL.COLO4_24935 Corchorus olitorius HOM05D002474 ORTHO05D006727 4.6e-163 578.6 411 68.9
Aa31LG9G1670 Aethionema arabicum HOM05D002474 ORTHO05D006727 1.0e-162 577.4 423 65.7
Nitab4.5_0023901g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 3.9e-162 575.5 403 69.7
FAN02G0112 Fragaria x ananassa HOM05D002474 ORTHO05D006727 8.7e-162 574.3 453 64.0
Haze_14590 Corylus avellana HOM05D002474 ORTHO05D006727 1.9e-161 573.2 472 63.1
Thhalv10028129m.g Eutrema salsugineum HOM05D002474 ORTHO05D006727 7.3e-161 571.2 425 65.9
TWI60G0106 Tripterygium wilfordii HOM05D002474 ORTHO05D006727 7.3e-161 571.2 437 65.7
Zm00001eb033100 Zea mays HOM05D002474 ORTHO05D006727 4.7e-160 568.5 451 61.6
Sabra04G0087600 Salix brachista HOM05D002474 ORTHO05D006727 4.0e-159 565.5 459 63.6
Cpa.g.sc14.49 Carica papaya HOM05D002474 ORTHO05D006727 5.3e-159 565.1 457 63.5
arahy.Tifrunner.gnm1.ann1.DRNA5E Arachis hypogaea HOM05D002474 ORTHO05D006727 6.9e-159 564.7 458 62.0
FAN14G2185 Fragaria x ananassa HOM05D002474 ORTHO05D006727 2.6e-158 562.8 491 59.7
ATR0609G116 Amborella trichopoda HOM05D002474 ORTHO05D006727 1.7e-157 560.1 410 66.8
Glyma.19G019000 Glycine max HOM05D002474 ORTHO05D006727 1.7e-157 560.1 455 60.9
SGA_v2.0_scaffold224G42953 Striga asiatica HOM05D002474 ORTHO05D006727 3.8e-157 558.9 435 64.8
VMungo0464G0136 Vigna mungo HOM05D002474 ORTHO05D006727 3.8e-157 558.9 483 58.8
Sed0010242 Sechium edule HOM05D002474 ORTHO05D006727 5.1e-154 548.5 374 71.1
ClCG09G018440 Citrullus lanatus HOM05D002474 ORTHO05D006727 3.3e-153 545.8 555 53.7
CANSAT64G2711 Cannabis sativa HOM05D002474 ORTHO05D006727 6.2e-152 541.6 433 62.8
Peaxi162Scf00059g00319 Petunia axillaris HOM05D002474 ORTHO05D006727 2.4e-151 539.7 455 61.5
FAN05G2709 Fragaria x ananassa HOM05D002474 ORTHO05D006727 4.5e-150 535.4 454 62.1
Rhsim10G0032000 Rhododendron simsii HOM05D002474 ORTHO05D006727 5.8e-150 535.0 411 65.7
Dinv33713 Davidia involucrata HOM05D002474 ORTHO05D006727 3.8e-149 532.3 350 73.4
DCAR_011168 Daucus carota HOM05D002474 ORTHO05D006727 1.2e-147 527.3 386 67.4
FAN09G4837 Fragaria x ananassa HOM05D002474 ORTHO05D006727 2.1e-147 526.6 498 56.4
BcaB06g27397 Brassica carinata HOM05D002474 ORTHO05D006727 1.5e-145 520.4 401 63.8
CSS0037906 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 2.6e-142 509.6 342 72.8
C04p46420 Brassica napus HOM05D002474 ORTHO05D006727 1.3e-141 507.3 379 64.6
AagrBONN_evm.TU.Sc2ySwM_369.199 Anthoceros agrestis HOM05D002474 ORTHO05D006727 4.6e-139 498.8 424 57.1
Pp3c23_2270 Physcomitrium patens HOM05D002474 ORTHO05D006727 3.9e-138 495.7 426 57.3
A04p12710 Brassica napus HOM05D002474 ORTHO05D006727 3.3e-137 492.7 370 63.5
AUR62018296 Chenopodium quinoa HOM05D002474 ORTHO05D006727 1.3e-136 490.7 423 61.2
vmacro05750 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 6.5e-133 478.4 436 58.0
Prupe.3G272800 Prunus persica HOM05D002474 ORTHO05D006727 7.4e-129 464.9 370 64.3
Mapoly0035s0063 Marchantia polymorpha HOM05D002474 ORTHO05D006727 1.3e-128 464.2 414 55.3
SalBow1G0883 Salvia bowleyana HOM05D002474 ORTHO05D006727 1.4e-124 450.7 442 55.2
HanXRQChr16g0519921 Helianthus annuus HOM05D002474 ORTHO05D006727 1.2e-123 447.6 324 67.9
SMO137G0254 Selaginella moellendorffii HOM05D002474 ORTHO05D006727 2.9e-117 426.4 463 47.9
Hma1.2p1_0449F.1_g154940 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 8.5e-117 424.9 317 68.5
Manes.S095220 Manihot esculenta HOM05D002474 ORTHO05D006727 8.8e-106 388.3 286 68.2
HPP92_014139 Vanilla planifolia HOM05D002474 ORTHO05D006727 3.1e-103 379.8 412 48.5
Cc07_g02920 Coffea canephora HOM05D002474 ORTHO05D006727 4.0e-98 362.8 273 65.6
QL02p080117 Quercus lobata HOM05D002474 ORTHO05D006727 1.2e-89 334.7 261 65.5
CBR_g50657 Chara braunii HOM05D002474 ORTHO05D006727 2.2e-80 303.9 259 56.8
Rhsim10G0031600 Rhododendron simsii HOM05D002474 ORTHO05D006727 1.1e-76 291.6 258 60.9
QL02p080121 Quercus lobata HOM05D002474 ORTHO05D006727 7.3e-76 288.9 184 71.7
Cc07_g02930 Coffea canephora HOM05D002474 ORTHO05D006727 8.3e-72 275.4 184 70.1
Hund13251 Selenicereus undatus HOM05D002474 ORTHO05D006727 1.1e-68 265.0 217 64.5
Lj7A402G46 Lonicera japonica HOM05D002474 ORTHO05D006727 1.8e-58 231.1 304 46.7
BolC4t26228H Brassica oleracea HOM05D002474 ORTHO05D006727 1.2e-57 228.4 166 67.5
Lsat_1_v5_gn_6_77521 Lactuca sativa HOM05D002474 ORTHO05D006727 1.4e-47 194.9 287 41.8
SpUN0485_0010 Schrenkiella parvula HOM05D002474 ORTHO05D006727 2.8e-43 180.6 108 77.8
SEGI_13584 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 1.4e-39 168.3 150 56.7
CBR_g59258 Chara braunii HOM05D002474 ORTHO05D006727 2.1e-38 164.5 122 62.3
Lj7A402G47 Lonicera japonica HOM05D002474 ORTHO05D006727 3.5e-38 163.7 96 79.2
HanXRQChr09g0265421 Helianthus annuus HOM05D002474 ORTHO05D006727 7.9e-38 162.5 121 63.6
Actinidia35021 Actinidia chinensis HOM05D002474 ORTHO05D006727 9.6e-36 155.6 285 40.4
Sp7g01810 Schrenkiella parvula HOM05D002474 ORTHO05D006727 1.5e-33 148.3 152 52.6
SEGI_37465 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 3.0e-29 134.0 87 67.8
MCO07G529 Micromonas commoda HOM05D002474 ORTHO05D006727 1.5e-28 131.7 450 27.6
Lsat_1_v5_gn_2_107941 Lactuca sativa HOM05D002474 ORTHO05D005260 3.3e-28 130.6 236 36.4
C09p60950 Brassica napus HOM05D002474 ORTHO05D006727 1.6e-27 128.3 111 55.9
BolC9t56457H Brassica oleracea HOM05D002474 ORTHO05D006727 1.2e-22 112.1 103 53.4
MBI04_g20672_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 3.5e-22 110.5 223 35.9
C09p36190 Brassica napus HOM05D002474 ORTHO05D006727 1.6e-19 101.7 96 52.1
Cre09.g389400 Chlamydomonas reinhardtii HOM05D002474 ORTHO05D006727 1.0e-16 92.4 269 25.7
PRCOL_00006911 Prasinoderma coloniale HOM05D002474 ORTHO05D006727 1.9e-15 88.2 480 24.0
FAN10G3970 Fragaria x ananassa HOM05D002474 ORTHO05D006727 7.2e-15 86.3 45 86.7
MBI04_g20673_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 1.6e-14 85.1 77 50.6
FAN10G3068 Fragaria x ananassa HOM05D002474 ORTHO05D006727 2.7e-14 84.3 44 86.4
Rhsim10G0031800 Rhododendron simsii HOM05D002474 ORTHO05D006727 4.6e-14 83.6 52 71.2
BcaC04g18910 Brassica carinata HOM05D002474 ORTHO05D006727 8.7e-13 79.3 109 40.4
vmacro03926 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 3.4e-09 67.4 39 74.4
Peaxi162Scf00036g01918 Petunia axillaris HOM05D002474 ORTHO05D006727 4.5e-09 67.0 65 43.1
vmacro05749 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 7.7e-09 66.2 39 74.4
Peaxi162Scf00781g00210 Petunia axillaris HOM05D002474 ORTHO05D006727 1.9e-07 61.6 52 48.1
Glyma.13G065601 Glycine max HOM05D002474 ORTHO05D006727 1.6e-06 58.5 49 57.1


User provided reference genes

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