Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0006320 Simmondsia chinensis HOM05D007266 ORTHO05D005982 2.4e-116 422.2 209 100.0
Hund13391 Selenicereus undatus HOM05D007266 ORTHO05D005982 7.3e-33 144.8 179 45.3
EL10Ac2g02761 Beta vulgaris HOM05D007266 ORTHO05D005982 2.4e-23 113.2 182 41.2
FAN03G0408 Fragaria x ananassa HOM05D007266 ORTHO05D005982 1.2e-19 100.9 218 35.8
FAN01G0656 Fragaria x ananassa HOM05D007266 ORTHO05D005982 1.6e-19 100.5 218 35.8
FvH4_7g03880 Fragaria vesca HOM05D007266 ORTHO05D005982 3.5e-19 99.4 215 35.3
FAN06G1886 Fragaria x ananassa HOM05D007266 ORTHO05D005982 1.0e-18 97.8 217 35.0
FAN10G1696 Fragaria x ananassa HOM05D007266 ORTHO05D005982 2.3e-18 96.7 218 35.3
RcHm_v2.0_Chr1g0327331 Rosa chinensis HOM05D007266 ORTHO05D005982 3.0e-18 96.3 218 37.2
Potri.001G031800 Populus trichocarpa HOM05D007266 ORTHO05D005982 6.7e-18 95.1 219 31.1
QL04p021455 Quercus lobata HOM05D007266 ORTHO05D005982 4.8e-16 89.0 189 36.0
QL07p029255 Quercus lobata HOM05D007266 ORTHO05D005982 4.8e-16 89.0 189 36.0
AUR62031740 Chenopodium quinoa HOM05D007266 ORTHO05D005982 6.2e-16 88.6 170 37.6
Sabra01G0022900 Salix brachista HOM05D007266 ORTHO05D005982 6.2e-16 88.6 221 31.2
Cfa010951 Carpinus fangiana HOM05D007266 ORTHO05D005982 1.4e-15 87.4 216 34.3
Prupe.2G043600 Prunus persica HOM05D007266 ORTHO05D005982 5.3e-15 85.5 200 34.5
Actinidia01687 Actinidia chinensis HOM05D000639 ORTHO05D007519 2.0e-14 83.6 222 28.4
CiPaw.06G056200 Carya illinoinensis HOM05D007266 ORTHO05D005982 2.0e-14 83.6 199 33.2
TWI63G1068 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 4.5e-14 82.4 190 33.7
Atru.chr12.1311 Acer truncatum HOM05D007266 ORTHO05D005982 7.6e-14 81.6 220 31.8
Haze_02992 Corylus avellana HOM05D007266 ORTHO05D005982 7.6e-14 81.6 217 32.7
Dinv32008 Davidia involucrata HOM05D007266 ORTHO05D005982 7.6e-14 81.6 188 36.2
TAR633G1403 Trochodendron aralioides HOM05D007266 ORTHO05D005982 3.8e-13 79.3 201 30.8
TWI15G1169 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 5.0e-13 79.0 188 31.4
COL.COLO4_06637 Corchorus olitorius HOM05D007266 ORTHO05D005982 6.5e-13 78.6 211 28.9
Actinidia01519 Actinidia chinensis HOM05D007266 ORTHO05D005982 1.4e-12 77.4 188 29.3
CSS0040931 Camellia sinensis var. sinensis HOM05D007266 ORTHO05D005982 2.5e-12 76.6 221 29.4
MD07G1043900 Malus domestica HOM05D007266 ORTHO05D005982 2.5e-12 76.6 216 31.5
Ah.12g065060 Amaranthus hybridus HOM05D007266 ORTHO05D005982 3.2e-12 76.3 218 31.2
CiPaw.14G009500 Carya illinoinensis HOM05D007266 ORTHO05D005982 9.3e-12 74.7 217 33.2
Glyma.04G133400 Glycine max HOM05D007266 ORTHO05D005982 1.2e-11 74.3 125 34.4
Thecc.10G142300 Theobroma cacao HOM05D007266 ORTHO05D005982 2.1e-11 73.6 193 30.6
Ca_24011_v3 Cicer arietinum L. HOM05D007266 ORTHO05D005982 2.7e-11 73.2 127 36.2
Ca_24018_v3 Cicer arietinum L. HOM05D007266 ORTHO05D005982 2.7e-11 73.2 127 36.2
Manes.04G156300 Manihot esculenta HOM05D007266 ORTHO05D005982 6.1e-11 72.0 188 31.9
Ah.10g030010 Amaranthus hybridus HOM05D007266 ORTHO05D005982 1.5e-09 67.4 185 32.4
Psat4g144600 Pisum sativum HOM05D007266 ORTHO05D005982 1.9e-09 67.0 102 41.2
Rhsim01G0124500 Rhododendron simsii HOM05D007266 ORTHO05D005982 1.9e-09 67.0 215 26.0
vmacro21145 Vaccinium macrocarpon HOM05D007266 ORTHO05D005982 2.5e-09 66.6 126 34.9
Sabra03G0144500 Salix brachista HOM05D007266 ORTHO05D005982 4.3e-09 65.9 213 25.4
Duzib128G0414 Durio zibethinus HOM05D007266 ORTHO05D005982 5.7e-09 65.5 126 34.9
Hma1.2p1_0837F.1_g226230 Hydrangea macrophylla HOM05D007266 ORTHO05D005982 1.3e-08 64.3 197 33.0
arahy.Tifrunner.gnm1.ann1.5HCQ47 Arachis hypogaea HOM05D007266 ORTHO05D005982 1.6e-08 63.9 135 31.1
TAR369G0213 Trochodendron aralioides HOM05D007266 ORTHO05D005982 1.6e-08 63.9 226 27.9
Lalb_Chr01g0007421 Lupinus albus HOM05D007266 ORTHO05D005982 2.2e-08 63.5 126 31.7
arahy.Tifrunner.gnm1.ann1.E0LNSJ Arachis hypogaea HOM05D007266 ORTHO05D005982 8.2e-08 61.6 133 30.8
Eucgr.J00068 Eucalyptus grandis HOM05D007266 ORTHO05D005982 2.4e-07 60.1 125 30.4
Dinv11235 Davidia involucrata HOM05D007266 ORTHO05D005982 5.3e-07 58.9 127 34.6
Medtr8g040640 Medicago truncatula HOM05D007266 ORTHO05D005982 1.2e-06 57.8 178 30.3
TAR623G0101 Trochodendron aralioides HOM05D007266 ORTHO05D005982 1.2e-06 57.8 141 31.2
Glyma.13G191900 Glycine max HOM05D007266 ORTHO05D005982 5.9e-06 55.5 127 30.7
AUR62032625 Chenopodium quinoa HOM05D007266 ORTHO05D005982 1.0e-05 54.7 213 30.5


User provided reference genes

Program Settings