Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0006290 Simmondsia chinensis HOM05D007594 ORTHO05D009607 7.9e-247 856.7 438 100.0
Hund03165 Selenicereus undatus HOM05D007594 ORTHO05D009607 5.8e-64 249.2 462 39.6
Hund03166 Selenicereus undatus HOM05D007594 ORTHO05D009607 2.9e-63 246.9 471 39.9
Dinv03295 Davidia involucrata HOM05D007594 ORTHO05D009607 6.9e-57 225.7 456 37.3
AUR62023865 Chenopodium quinoa HOM05D007594 ORTHO05D009607 4.3e-51 206.5 460 36.7
TAR633G1990 Trochodendron aralioides HOM05D007594 ORTHO05D009607 5.6e-51 206.1 475 35.8
MD00G1152500 Malus domestica HOM05D007594 ORTHO05D009607 2.1e-50 204.1 464 36.9
Haze_02988 Corylus avellana HOM05D007594 ORTHO05D009607 8.1e-50 202.2 429 36.6
Hma1.2p1_1342F.1_g276950 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 6.0e-45 186.0 462 34.8
Prupe.2G044000 Prunus persica HOM05D007594 ORTHO05D009607 1.3e-42 178.3 459 34.4
Atru.chr12.1243 Acer truncatum HOM05D007594 ORTHO05D009607 1.5e-40 171.4 490 32.0
Actinidia06215 Actinidia chinensis HOM05D007594 ORTHO05D009607 1.1e-38 165.2 450 33.1
Rhsim07G0071100 Rhododendron simsii HOM05D007594 ORTHO05D009607 2.7e-37 160.6 462 32.5
Aqoxy1G00415 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 7.9e-37 159.1 468 32.5
Duzib128G1040 Durio zibethinus HOM05D007594 ORTHO05D009607 8.7e-36 155.6 442 35.5
RcHm_v2.0_Chr1g0327541 Rosa chinensis HOM05D007594 ORTHO05D009607 4.3e-35 153.3 454 33.7
Lj3g0014217 Lotus japonicus HOM05D007594 ORTHO05D009607 3.7e-34 150.2 441 32.4
AUR62002319 Chenopodium quinoa HOM05D007594 ORTHO05D009607 4.8e-34 149.8 458 31.4
Glyma.11G170937 Glycine max HOM05D007594 ORTHO05D009607 4.8e-34 149.8 437 32.5
Ca_14092_v3 Cicer arietinum L. HOM05D007594 ORTHO05D009607 6.3e-34 149.4 458 30.6
ClCG11G013140 Citrullus lanatus HOM05D007594 ORTHO05D009607 4.1e-33 146.7 466 32.4
TWI63G1387 Tripterygium wilfordii HOM05D007594 ORTHO05D009607 4.1e-33 146.7 319 35.4
VMungo1080G0650 Vigna mungo HOM05D007594 ORTHO05D009607 9.0e-33 145.6 467 32.1
Phvul.005G018200 Phaseolus vulgaris HOM05D007594 ORTHO05D009607 1.5e-32 144.8 455 31.0
EL10Ac3g05954 Beta vulgaris HOM05D007594 ORTHO05D009607 4.5e-32 143.3 364 33.8
Lalb_Chr24g0402831 Lupinus albus HOM05D007594 ORTHO05D009607 5.8e-32 142.9 431 31.1
MBI13_g07373_MAGBIO Magnolia biondii HOM05D007594 ORTHO05D009607 2.2e-31 141.0 487 31.4
Hma1.2p1_1730F.1_g299670 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 3.8e-31 140.2 585 28.5
Thecc.10G140800 Theobroma cacao HOM05D007594 ORTHO05D009607 6.5e-31 139.4 440 32.7
Nn7g36922 Nelumbo nucifera HOM05D007594 ORTHO05D009607 1.4e-30 138.3 351 33.9
Sed0005696 Sechium edule HOM05D007594 ORTHO05D009607 1.2e-29 135.2 458 29.9
FvH4_7g03921 Fragaria vesca HOM05D007594 ORTHO05D009607 2.7e-29 134.0 476 30.3
FAN06G1277 Fragaria x ananassa HOM05D007594 ORTHO05D009607 7.9e-29 132.5 475 29.7
Manes.04G156000 Manihot esculenta HOM05D007594 ORTHO05D009607 1.3e-28 131.7 348 34.2
Solyc07g048100.3 Solanum lycopersicum HOM05D007594 ORTHO05D009607 2.3e-28 131.0 440 30.9
Eucgr.G03206 Eucalyptus grandis HOM05D007594 ORTHO05D009607 6.7e-28 129.4 452 28.8
DCAR_006600 Daucus carota HOM05D007594 ORTHO05D009607 1.9e-27 127.9 303 35.3
CiPaw.13G016300 Carya illinoinensis HOM05D007594 ORTHO05D009607 2.5e-27 127.5 291 37.8
vmacro13773 Vaccinium macrocarpon HOM05D007594 ORTHO05D009607 9.7e-27 125.6 506 29.6
Potri.003G193100 Populus trichocarpa HOM05D007594 ORTHO05D009607 1.6e-26 124.8 483 29.0
Psat5g215360 Pisum sativum HOM05D007594 ORTHO05D009607 2.2e-26 124.4 337 32.6
CsaV3_5G029660 Cucumis sativus L. HOM05D007594 ORTHO05D009607 4.8e-26 123.2 461 30.2
Peaxi162Scf02035g00032 Petunia axillaris HOM05D007594 ORTHO05D009607 4.8e-26 123.2 437 28.4
Medtr3g013490 Medicago truncatula HOM05D007594 ORTHO05D009607 6.3e-26 122.9 481 29.3
arahy.Tifrunner.gnm1.ann1.IJ2ITM Arachis hypogaea HOM05D007594 ORTHO05D009607 1.4e-25 121.7 460 31.1
Ca_14091_v3 Cicer arietinum L. HOM05D007594 ORTHO05D009607 1.4e-25 121.7 389 30.6
FAN03G3082 Fragaria x ananassa HOM05D000688 ORTHO05D003888 1.8e-25 121.3 444 28.8
arahy.Tifrunner.gnm1.ann1.HR2C9L Arachis hypogaea HOM05D007594 ORTHO05D009607 4.1e-25 120.2 455 30.8
FAN01G0543 Fragaria x ananassa HOM05D007594 ORTHO05D009607 2.6e-24 117.5 312 32.7
CANSAT56G2828 Cannabis sativa HOM05D007594 ORTHO05D009607 3.4e-24 117.1 459 29.2
Cc00_g06100 Coffea canephora HOM05D007594 ORTHO05D009607 5.9e-24 116.3 431 27.8
ECA246G0181 Erigeron canadensis HOM05D007594 ORTHO05D009607 1.7e-23 114.8 459 27.7
Gorai.011G220800 Gossypium raimondii HOM05D007594 ORTHO05D009607 5.5e-22 109.8 530 28.9
Nitab4.5_0004215g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 4.6e-21 106.7 378 28.8
CAN.G897.9 Capsicum annuum HOM05D007594 ORTHO05D009607 7.9e-21 105.9 376 29.0
Nitab4.5_0004358g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 1.8e-20 104.8 383 30.0
Lsat_1_v5_gn_1_118241 Lactuca sativa HOM05D007594 ORTHO05D009607 1.5e-19 101.7 296 30.4
GSVIVG01036598001 Vitis vinifera HOM05D007594 ORTHO05D009607 2.5e-19 100.9 143 50.3
Gohir.D10G197300 Gossypium hirsutum HOM05D007594 ORTHO05D009607 4.3e-19 100.1 149 44.3
SalBow5G4015 Salvia bowleyana HOM05D007594 ORTHO05D009607 2.2e-18 97.8 436 28.2
TPR.G1438 Trifolium pratense HOM05D007594 ORTHO05D009607 2.8e-18 97.4 478 26.2
Gohir.A10G189500 Gossypium hirsutum HOM05D007594 ORTHO05D009607 2.4e-17 94.4 447 26.4
SGA_v2.0_scaffold124G33645 Striga asiatica HOM05D007594 ORTHO05D009607 4.1e-17 93.6 444 27.7
HanXRQChr05g0146261 Helianthus annuus HOM05D007594 ORTHO05D009607 6.9e-17 92.8 435 28.0
Sopen07g024530 Solanum pennellii HOM05D007594 ORTHO05D009607 2.6e-16 90.9 349 30.1
MELO3C011810.2 Cucumis melo HOM05D007594 ORTHO05D009607 3.2e-14 84.0 345 28.1
Os03g0811200 Oryza sativa ssp. japonica HOM05D007594 ORTHO05D009607 7.9e-13 79.3 294 28.2
ATR0307G127 Amborella trichopoda HOM05D007594 ORTHO05D009607 1.5e-11 75.1 223 33.2
ATR0445G001 Amborella trichopoda HOM05D007594 ORTHO05D009607 1.3e-10 72.0 116 44.0
PSO339G5236 Papaver somniferum HOM05D007594 ORTHO05D009607 3.7e-10 70.5 151 37.7
PSO384G4678 Papaver somniferum HOM05D007594 ORTHO05D009607 1.1e-09 68.9 181 34.8
Nn7g38492 Nelumbo nucifera HOM05D007594 ORTHO05D009607 1.4e-09 68.6 260 31.5
THA.LOC104826746 Tarenaya hassleriana HOM05D007594 ORTHO05D009607 2.9e-07 60.8 93 45.2
unitig_22.g5331 Utricularia gibba HOM05D007594 ORTHO05D009607 2.9e-07 60.8 182 33.5
Aqoxy1G00416 Aquilegia oxysepala HOM05D000782 ORTHO05D000571 8.5e-07 59.3 89 41.6


User provided reference genes

Program Settings