Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 3.9e-61 238.0 128 100.0
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 1.4e-39 166.4 131 68.7
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 5.5e-39 164.5 114 77.2
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 2.1e-38 162.5 130 66.9
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 4.6e-38 161.4 129 65.9
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 7.9e-38 160.6 125 68.0
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 7.9e-38 160.6 129 65.9
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 1.0e-37 160.2 114 72.8
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 1.4e-37 159.8 120 70.8
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 3.0e-37 158.7 129 67.4
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 5.1e-37 157.9 114 73.7
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 5.1e-37 157.9 126 69.0
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 6.7e-37 157.5 113 74.3
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 6.7e-37 157.5 119 69.7
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 6.7e-37 157.5 124 66.9
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 8.8e-37 157.1 129 65.9
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.1e-36 156.8 128 64.8
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 1.1e-36 156.8 119 69.7
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 1.5e-36 156.4 113 74.3
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 1.5e-36 156.4 129 64.3
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 1.5e-36 156.4 118 69.5
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 2.0e-36 156.0 115 73.9
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 2.5e-36 155.6 116 70.7
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 3.3e-36 155.2 131 64.1
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 4.3e-36 154.8 113 71.7
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 4.3e-36 154.8 105 77.1
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 4.3e-36 154.8 119 68.9
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 4.3e-36 154.8 129 65.1
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 5.7e-36 154.5 125 67.2
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 5.7e-36 154.5 129 65.1
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 5.7e-36 154.5 127 64.6
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 7.4e-36 154.1 120 70.0
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 1.7e-35 152.9 119 68.1
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 1.7e-35 152.9 113 69.0
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 1.7e-35 152.9 113 69.0
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 2.8e-35 152.1 114 71.1
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 2.8e-35 152.1 114 71.1
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 4.8e-35 151.4 129 65.1
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 4.8e-35 151.4 126 65.9
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 6.3e-35 151.0 118 68.6
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 6.3e-35 151.0 114 68.4
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 6.3e-35 151.0 129 62.8
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 6.3e-35 151.0 129 62.8
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 8.2e-35 150.6 109 72.5
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 1.4e-34 149.8 118 68.6
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 1.8e-34 149.4 119 66.4
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 1.8e-34 149.4 110 72.7
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 3.1e-34 148.7 111 69.4
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 3.1e-34 148.7 116 69.0
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 4.1e-34 148.3 114 67.5
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 6.9e-34 147.5 116 67.2
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 2.0e-33 146.0 115 67.8
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 2.0e-33 146.0 111 68.5
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 2.6e-33 145.6 107 71.0
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 2.6e-33 145.6 114 64.9
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 3.4e-33 145.2 118 64.4
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 3.4e-33 145.2 118 64.4
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 4.5e-33 144.8 108 69.4
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 4.5e-33 144.8 108 69.4
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 4.5e-33 144.8 123 63.4
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 5.9e-33 144.4 118 67.8
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 7.7e-33 144.1 117 65.0
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 7.7e-33 144.1 117 65.0
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 7.7e-33 144.1 117 65.0
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 1.3e-32 143.3 143 58.0
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 1.3e-32 143.3 116 66.4
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 1.7e-32 142.9 122 63.9
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 2.2e-32 142.5 118 65.3
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 2.2e-32 142.5 109 70.6
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 2.9e-32 142.1 115 66.1
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 2.9e-32 142.1 130 60.8
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 3.8e-32 141.7 111 68.5
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 3.8e-32 141.7 114 68.4
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 3.8e-32 141.7 114 68.4
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 5.0e-32 141.4 122 63.9
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.4e-31 139.8 115 65.2
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 1.4e-31 139.8 113 67.3
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 1.9e-31 139.4 129 59.7
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 1.9e-31 139.4 127 63.0
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 2.5e-31 139.0 100 74.0
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 2.5e-31 139.0 122 64.8
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 4.2e-31 138.3 114 66.7
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 5.5e-31 137.9 117 63.2
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 7.2e-31 137.5 106 69.8
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.6e-30 136.3 93 77.4
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 1.6e-30 136.3 117 65.0
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 1.6e-30 136.3 113 65.5
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 2.1e-30 136.0 158 51.9
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 4.7e-30 134.8 124 58.9
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 3.0e-29 132.1 105 71.4
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 3.9e-29 131.7 110 64.5
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 7.4e-28 127.5 91 73.6
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 6.3e-27 124.4 97 69.1
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 1.4e-26 123.2 128 55.5
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 1.3e-24 116.7 123 57.7
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 1.9e-23 112.8 81 72.8
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 3.2e-23 112.1 116 58.6
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 2.7e-22 109.0 105 58.1
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 5.2e-21 104.8 97 62.9
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 8.2e-19 97.4 91 60.4
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 2.4e-18 95.9 103 51.5
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 1.0e-16 90.5 97 45.4
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 5.5e-15 84.7 95 55.8
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 8.0e-14 80.9 107 43.9
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 1.0e-13 80.5 57 71.9
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 6.8e-13 77.8 57 68.4
MD05G1005700 Malus domestica HOM05D007302 ORTHO05D009191 3.7e-11 72.0 51 76.5
MD15G1336100 Malus domestica HOM05D007302 ORTHO05D009191 8.0e-06 54.3 51 52.9


User provided reference genes

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