Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0006000 Simmondsia chinensis HOM05D004066 ORTHO05D004434 1.9e-118 429.1 207 100.0
Sc08g0005020 Simmondsia chinensis HOM05D004066 ORTHO05D004434 9.3e-105 383.6 212 90.6
Sc02g0005590 Simmondsia chinensis HOM05D010674 ORTHO05D012685 1.2e-35 154.1 133 63.2
Hund07415 Selenicereus undatus HOM05D004066 ORTHO05D004434 6.8e-31 138.3 203 40.9
Sc11g0005960 Simmondsia chinensis HOM05D010674 ORTHO05D012685 7.3e-25 118.2 75 80.0
Hund30796 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.0e-22 110.2 202 36.6
Hund13048 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.4e-22 109.4 201 36.8
Hund24360 Selenicereus undatus HOM05D004066 ORTHO05D004434 5.8e-22 108.6 213 35.2
Hund10878 Selenicereus undatus HOM05D004066 ORTHO05D004434 7.5e-22 108.2 201 35.8
Hund13844 Selenicereus undatus HOM05D004066 ORTHO05D004434 7.5e-22 108.2 201 35.8
Hund04034 Selenicereus undatus HOM05D004066 ORTHO05D004434 9.9e-22 107.8 201 35.3
Hund11364 Selenicereus undatus HOM05D004066 ORTHO05D004434 9.9e-22 107.8 202 35.1
Hund22617 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.7e-21 107.1 201 35.3
Hund15061 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.9e-21 105.5 147 40.8
Hund28976 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.9e-21 105.5 147 40.1
Hund28977 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.9e-21 105.5 147 40.1
Sc11g0003480 Simmondsia chinensis HOM05D010674 ORTHO05D012685 6.4e-21 105.1 93 64.5
Hund14776 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.1e-20 104.4 201 35.3
Hund30132 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.4e-20 104.0 213 35.2
Hund30727 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.4e-20 104.0 213 35.2
Hund19649 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.9e-20 103.6 197 36.0
AUR62010149 Chenopodium quinoa HOM05D001385 ORTHO05D004434 2.4e-20 103.2 162 38.3
Hund04453 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.4e-20 103.2 198 36.4
Hund26531 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.2e-20 102.8 201 35.3
Hund29980 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.2e-20 102.8 188 35.6
Hund12908 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.1e-20 102.4 201 34.3
Hund31264 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.7e-19 99.8 201 34.3
Hund06374 Selenicereus undatus HOM05D001385 ORTHO05D004434 4.6e-19 99.0 142 38.7
Sc11g0006030 Simmondsia chinensis HOM05D010674 ORTHO05D012685 4.6e-19 99.0 82 67.1
Hund11417 Selenicereus undatus HOM05D004066 ORTHO05D004434 6.0e-19 98.6 213 32.9
EL10Ac9g21493 Beta vulgaris HOM05D001385 ORTHO05D004434 1.0e-18 97.8 144 38.2
Hund18668 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.0e-18 97.8 194 35.1
Hund23677 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.5e-17 94.0 198 33.3
Hund30625 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.5e-17 94.0 147 39.5
Sc08g0003870 Simmondsia chinensis HOM05D010674 ORTHO05D012685 1.9e-17 93.6 75 66.7
Hund01500 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.5e-17 93.2 213 33.3
Hund11418 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.3e-17 92.8 157 37.6
Hund15645 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.3e-17 92.8 157 37.6
Hund14635 Selenicereus undatus HOM05D004066 ORTHO05D004434 5.6e-17 92.0 194 32.0
Hund01077 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.2e-16 90.9 129 39.5
Hund10497 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.2e-16 90.9 189 33.3
Sc17g0004480 Simmondsia chinensis HOM05D010674 ORTHO05D012685 1.2e-16 90.9 123 42.3
Hund03735 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.7e-16 89.0 123 39.8
Hund03850 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.7e-16 89.0 201 32.3
Hund12494 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.7e-16 89.0 157 36.3
Hund17387 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.7e-16 89.0 156 35.9
Hund08825 Selenicereus undatus HOM05D004066 ORTHO05D004434 6.2e-16 88.6 139 36.7
Hund25713 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.1e-15 87.8 178 35.4
Hund01655 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.8e-15 87.0 202 32.7
Hund13918 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.8e-15 87.0 156 34.6
Hund03950 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.4e-15 86.7 101 43.6
Sc03g0005810 Simmondsia chinensis HOM05D010674 ORTHO05D012685 2.4e-15 86.7 206 30.6
Hund27434 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.1e-15 86.3 178 33.7
CSS0011333 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.0e-15 85.9 133 34.6
Hund23557 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.0e-15 85.9 177 33.3
Hund09968 Selenicereus undatus HOM05D004066 ORTHO05D004434 6.8e-15 85.1 156 34.6
Rhsim04G0054800 Rhododendron simsii HOM05D001309 ORTHO05D000385 8.9e-15 84.7 177 33.3
Hund00070 Selenicereus undatus HOM05D001385 ORTHO05D004434 8.9e-15 84.7 104 40.4
Hund28638 Selenicereus undatus HOM05D004066 ORTHO05D004434 8.9e-15 84.7 207 30.4
Hund20387 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.5e-14 84.0 91 45.1
Hund29993 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.4e-14 82.8 156 34.0
Hund01503 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.4e-14 82.4 152 34.2
Sc11g0002590 Simmondsia chinensis HOM05D010674 ORTHO05D012685 4.4e-14 82.4 206 29.6
CSS0011055 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.8e-14 82.0 133 33.1
Hund10449 Selenicereus undatus HOM05D004066 ORTHO05D004434 5.8e-14 82.0 149 37.6
CSS0004946 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 7.6e-14 81.6 133 33.1
CSS0007321 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 7.6e-14 81.6 133 33.8
CSS0017872 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 7.6e-14 81.6 133 33.8
CSS0024690 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 9.9e-14 81.3 133 33.1
CSS0042181 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 9.9e-14 81.3 133 33.1
Rhsim04G0055300 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.9e-14 81.3 184 32.6
CSS0000023 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.3e-13 80.9 116 36.2
Sc25g0003090 Simmondsia chinensis HOM05D010674 ORTHO05D012685 1.7e-13 80.5 39 97.4
Hund01166 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.8e-13 79.3 138 36.2
Hund12154 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.8e-13 79.3 153 34.0
Ah.05g175550 Amaranthus hybridus HOM05D001385 ORTHO05D008760 8.4e-13 78.2 141 31.2
Hund14747 Selenicereus undatus HOM05D004066 ORTHO05D004434 8.4e-13 78.2 147 34.7
Ah.05g177810 Amaranthus hybridus HOM05D001385 ORTHO05D002073 1.4e-12 77.4 141 31.2
EL10Ac5g11862 Beta vulgaris HOM05D001385 ORTHO05D008760 1.9e-12 77.0 146 32.2
AUR62039827 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.9e-12 77.0 123 30.9
EL10Ac1g01131 Beta vulgaris HOM05D001385 ORTHO05D008760 4.2e-12 75.9 146 28.8
EL10Ac9g21092 Beta vulgaris HOM05D001385 ORTHO05D008760 4.2e-12 75.9 146 28.8
AUR62040137 Chenopodium quinoa HOM05D001385 ORTHO05D008760 4.2e-12 75.9 124 33.1
EL10Ac2g03907 Beta vulgaris HOM05D001385 ORTHO05D008760 5.4e-12 75.5 146 28.8
EL10Ac4g08894 Beta vulgaris HOM05D001385 ORTHO05D008760 5.4e-12 75.5 146 28.8
EL10Ac6g14099 Beta vulgaris HOM05D001385 ORTHO05D008760 5.4e-12 75.5 146 28.8
Hund10716 Selenicereus undatus HOM05D004066 ORTHO05D004434 5.4e-12 75.5 102 38.2
Hund23564 Selenicereus undatus HOM05D004066 ORTHO05D004434 9.2e-12 74.7 164 34.8
AUR62013145 Chenopodium quinoa HOM05D001385 ORTHO05D000378 1.2e-11 74.3 144 33.3
PGR083G0420 Punica granatum HOM05D001309 ORTHO05D000385 1.2e-11 74.3 127 29.9
AUR62014303 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.6e-11 73.9 146 32.2
Hund18251 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.6e-11 73.9 194 27.8
EL10Ac1g02060 Beta vulgaris HOM05D001385 ORTHO05D008760 2.7e-11 73.2 125 33.6
EL10Ac4g09023 Beta vulgaris HOM05D001385 ORTHO05D008760 3.5e-11 72.8 146 28.1
EL10Ac8g19807 Beta vulgaris HOM05D001385 ORTHO05D008760 4.6e-11 72.4 146 28.1
Ah.02g123480 Amaranthus hybridus HOM05D001385 ORTHO05D008760 6.0e-11 72.0 123 33.3
Ah.10g025350 Amaranthus hybridus HOM05D001385 ORTHO05D008760 1.0e-10 71.2 123 33.3
AUR62005475 Chenopodium quinoa HOM05D001385 ORTHO05D004434 1.0e-10 71.2 146 27.4
EL10Ac1g01188 Beta vulgaris HOM05D001385 ORTHO05D008760 1.3e-10 70.9 146 27.4
CSS0031187 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.3e-10 70.1 136 31.6
AUR62034140 Chenopodium quinoa HOM05D001385 ORTHO05D008760 3.0e-10 69.7 166 29.5
EL10Ac6g14499 Beta vulgaris HOM05D001385 ORTHO05D008760 3.9e-10 69.3 123 33.3
EL10Ac7g18151 Beta vulgaris HOM05D001385 ORTHO05D008760 3.9e-10 69.3 123 33.3
AUR62040146 Chenopodium quinoa HOM05D001385 ORTHO05D008760 5.1e-10 68.9 158 29.1
Hund10300 Selenicereus undatus HOM05D004066 ORTHO05D004434 8.7e-10 68.2 81 42.0
CSS0036507 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.1e-09 67.8 111 34.2
CiPaw.10G087600 Carya illinoinensis HOM05D001309 ORTHO05D000385 1.5e-09 67.4 160 31.2
CiPaw.16G105200 Carya illinoinensis HOM05D001309 ORTHO05D000385 1.5e-09 67.4 160 31.2
Hund28934 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.9e-09 67.0 208 28.4
Hund28935 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.9e-09 67.0 208 28.4
AUR62026509 Chenopodium quinoa HOM05D001385 ORTHO05D008760 3.3e-09 66.2 170 28.2
EL10Ac1g02023 Beta vulgaris HOM05D001385 ORTHO05D008760 7.3e-09 65.1 80 38.8
Hund30624 Selenicereus undatus HOM05D004066 ORTHO05D004434 7.3e-09 65.1 84 44.0
CiPaw.16G058400 Carya illinoinensis HOM05D001309 ORTHO05D000385 9.6e-09 64.7 142 32.4
AUR62042851 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.1e-08 63.5 123 30.9
Nitab4.5_0007957g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.1e-08 63.5 135 28.1
Hund26274 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.1e-08 63.5 153 32.0
Cpa.g.c35072.1 Carica papaya HOM05D001309 ORTHO05D000385 2.8e-08 63.2 183 28.4
Sc10g0005220 Simmondsia chinensis HOM05D010674 ORTHO05D012685 2.8e-08 63.2 78 44.9
TWI34G1252 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 2.8e-08 63.2 133 30.8
Nitab4.5_0000188g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.6e-08 62.8 142 29.6
Hund00964 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.7e-08 62.4 88 39.8
Hund20142 Selenicereus undatus HOM05D001385 ORTHO05D008760 4.7e-08 62.4 79 36.7
CiPaw.09G181600 Carya illinoinensis HOM05D001309 ORTHO05D000385 6.2e-08 62.0 200 27.5
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 6.2e-08 62.0 130 30.8
Hund24609 Selenicereus undatus HOM05D001385 ORTHO05D008760 6.2e-08 62.0 79 35.4
VMungo0647G1703 Vigna mungo HOM05D002954 ORTHO05D000002 8.1e-08 61.6 120 31.7
EL10Ac1g01824 Beta vulgaris HOM05D001385 ORTHO05D008760 1.1e-07 61.2 79 36.7
EL10Ac5g11714 Beta vulgaris HOM05D000107 ORTHO05D000062 1.1e-07 61.2 79 36.7
Nitab4.5_0000781g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-07 61.2 142 28.2
Nitab4.5_0002394g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-07 61.2 117 31.6
Sc18g0002940 Simmondsia chinensis HOM05D010674 ORTHO05D012685 1.1e-07 61.2 74 44.6
Sc13g0007340 Simmondsia chinensis HOM05D001385 ORTHO05D004434 1.4e-07 60.8 80 36.2
VMungo0720G1591 Vigna mungo HOM05D002954 ORTHO05D000385 1.4e-07 60.8 121 32.2
Nitab4.5_0000804g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.4e-07 60.1 111 32.4
Nitab4.5_0004695g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.4e-07 60.1 115 27.8
EL10Ac9g20910 Beta vulgaris HOM05D001385 ORTHO05D008760 3.1e-07 59.7 79 36.7
AUR62005473 Chenopodium quinoa HOM05D001385 ORTHO05D004434 4.0e-07 59.3 100 28.0
Ah.14g081560 Amaranthus hybridus HOM05D009900 ORTHO05D011543 5.3e-07 58.9 124 27.4
Nitab4.5_0003082g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.3e-07 58.9 116 30.2
Nitab4.5_0028686g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.9e-07 58.5 117 30.8
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 1.2e-06 57.8 98 33.7
Ah.13g066910 Amaranthus hybridus HOM05D001385 ORTHO05D008760 2.0e-06 57.0 66 37.9
Hund02732 Selenicereus undatus HOM05D009900 ORTHO05D011543 2.0e-06 57.0 98 33.7
vmacro21926 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 2.0e-06 57.0 97 35.1
vmacro23420 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 2.0e-06 57.0 97 35.1
Gohir.D04G003250 Gossypium hirsutum HOM05D001309 ORTHO05D000385 2.6e-06 56.6 133 25.6
Nitab4.5_0003690g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.6e-06 56.6 126 27.8
Sc02g0004660 Simmondsia chinensis HOM05D010674 ORTHO05D012685 2.6e-06 56.6 49 59.2
Gohir.D10G156350 Gossypium hirsutum HOM05D001309 ORTHO05D000385 3.4e-06 56.2 130 27.7
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 3.4e-06 56.2 98 32.7
Nitab4.5_0004285g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.4e-06 56.2 189 24.9
Sc25g0004080 Simmondsia chinensis HOM05D010674 ORTHO05D012685 3.4e-06 56.2 75 38.7
ECA248G1144 Erigeron canadensis HOM05D009609 ORTHO05D011572 4.4e-06 55.8 111 27.9
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.4e-06 55.8 80 35.0
Hund04136 Selenicereus undatus HOM05D009900 ORTHO05D011543 5.8e-06 55.5 98 31.6
Hund14852 Selenicereus undatus HOM05D009900 ORTHO05D011543 5.8e-06 55.5 160 26.9
Hund03653 Selenicereus undatus HOM05D004066 ORTHO05D004434 7.6e-06 55.1 71 38.0
AUR62028470 Chenopodium quinoa HOM05D001385 ORTHO05D008760 9.9e-06 54.7 141 27.7
Nitab4.5_0001199g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.9e-06 54.7 195 24.6
Hund14849 Selenicereus undatus HOM05D009900 ORTHO05D011543 9.9e-06 54.7 98 31.6
Hund14851 Selenicereus undatus HOM05D009900 ORTHO05D011543 9.9e-06 54.7 98 31.6


User provided reference genes

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