Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0005920 Simmondsia chinensis HOM05D000447 ORTHO05D387840 1.9e-68 262.3 125 100.0
Sc11g0005910 Simmondsia chinensis HOM05D000447 ORTHO05D000315 3.5e-22 108.6 63 81.0
EL10Ac2g02640 Beta vulgaris HOM05D000447 ORTHO05D000315 5.1e-13 78.2 63 60.3
AUR62030598 Chenopodium quinoa HOM05D000447 ORTHO05D000315 8.6e-13 77.4 62 58.1
AUR62024942 Chenopodium quinoa HOM05D000447 ORTHO05D000315 1.9e-12 76.3 63 57.1
EL10Ac2g02637 Beta vulgaris HOM05D000447 ORTHO05D000315 2.0e-09 66.2 59 54.2
Sc03g0005300 Simmondsia chinensis HOM05D000447 ORTHO05D000315 4.9e-08 61.6 63 46.0
Manes.11G075100 Manihot esculenta HOM05D000447 ORTHO05D000315 1.4e-07 60.1 69 42.0
TAR371G0435 Trochodendron aralioides HOM05D000447 ORTHO05D000315 2.4e-07 59.3 67 41.8
Aqoxy5G03039 Aquilegia oxysepala HOM05D000447 ORTHO05D000315 4.1e-07 58.5 63 42.9
COL.COLO4_13390 Corchorus olitorius HOM05D000447 ORTHO05D000315 4.1e-07 58.5 63 44.4
Manes.04G094200 Manihot esculenta HOM05D000447 ORTHO05D000315 4.1e-07 58.5 69 42.0
TAR629G0538 Trochodendron aralioides HOM05D000447 ORTHO05D000315 4.1e-07 58.5 63 44.4
Cpa.g.sc70.51 Carica papaya HOM05D000447 ORTHO05D000315 5.4e-07 58.2 63 42.9
Ca_08212_v3 Cicer arietinum L. HOM05D000447 ORTHO05D000315 7.1e-07 57.8 63 39.7
Duzib187G0421 Durio zibethinus HOM05D000447 ORTHO05D000315 7.1e-07 57.8 67 41.8
Glyma.19G105100 Glycine max HOM05D000447 ORTHO05D000315 7.1e-07 57.8 69 36.2
TAR622G0567 Trochodendron aralioides HOM05D000447 ORTHO05D000315 7.1e-07 57.8 63 44.4
ClCG05G012560 Citrullus lanatus HOM05D000447 ORTHO05D000315 9.2e-07 57.4 67 40.3
Medtr7g084300 Medicago truncatula HOM05D000447 ORTHO05D000315 9.2e-07 57.4 63 39.7
Nn4g22100 Nelumbo nucifera HOM05D000447 ORTHO05D000315 9.2e-07 57.4 63 44.4
Peaxi162Scf00817g00216 Petunia axillaris HOM05D000447 ORTHO05D000315 9.2e-07 57.4 67 35.8
Potri.014G145100 Populus trichocarpa HOM05D000447 ORTHO05D000315 1.2e-06 57.0 63 42.9
GSVIVG01032968001 Vitis vinifera HOM05D000447 ORTHO05D000315 1.2e-06 57.0 63 42.9
EL10Ac1g00850 Beta vulgaris HOM05D000447 ORTHO05D000315 1.6e-06 56.6 63 41.3
EL10Ac1g00851 Beta vulgaris HOM05D000447 ORTHO05D000315 1.6e-06 56.6 63 41.3
EL10Ac1g00853 Beta vulgaris HOM05D000447 ORTHO05D000315 1.6e-06 56.6 63 41.3
Dinv38266 Davidia involucrata HOM05D000447 ORTHO05D000315 1.6e-06 56.6 63 39.7
Sc03g0005290 Simmondsia chinensis HOM05D000447 ORTHO05D000315 1.6e-06 56.6 63 44.4
CiPaw.07G054100 Carya illinoinensis HOM05D000447 ORTHO05D000315 2.1e-06 56.2 63 42.9
DCAR_014462 Daucus carota HOM05D000447 ORTHO05D000315 2.1e-06 56.2 63 41.3
Lj6A615G84 Lonicera japonica HOM05D000447 ORTHO05D000315 2.1e-06 56.2 67 40.3
PSO210G1491 Papaver somniferum HOM05D000447 ORTHO05D000315 2.1e-06 56.2 63 41.3
PSO210G4470 Papaver somniferum HOM05D000447 ORTHO05D000315 2.1e-06 56.2 63 41.3
Thecc.04G049300 Theobroma cacao HOM05D000447 ORTHO05D000315 2.1e-06 56.2 63 41.3
CsaV3_3G027830 Cucumis sativus L. HOM05D000447 ORTHO05D000315 2.7e-06 55.8 63 42.9
PGR142G0629 Punica granatum HOM05D000447 ORTHO05D000315 2.7e-06 55.8 63 42.9
QL02p069176 Quercus lobata HOM05D000447 ORTHO05D000315 2.7e-06 55.8 63 41.3
PGSC0003DMG400029621 Solanum tuberosum HOM05D000447 ORTHO05D000315 2.7e-06 55.8 67 35.8
PSO017G3769 Papaver somniferum HOM05D000447 ORTHO05D000315 3.5e-06 55.5 63 39.7
PSO478G2480 Papaver somniferum HOM05D000447 ORTHO05D000315 3.5e-06 55.5 63 39.7
Phvul.001G083000 Phaseolus vulgaris HOM05D000447 ORTHO05D000315 3.5e-06 55.5 63 39.7
Sabra14G0109300 Salix brachista HOM05D000447 ORTHO05D000315 3.5e-06 55.5 63 41.3
Atru.chr6.2711 Acer truncatum HOM05D000447 ORTHO05D000315 6.0e-06 54.7 63 41.3
Cfa007149 Carpinus fangiana HOM05D000447 ORTHO05D000315 6.0e-06 54.7 63 41.3
Haze_14970 Corylus avellana HOM05D000447 ORTHO05D000315 6.0e-06 54.7 63 41.3
MELO3C014767.2 Cucumis melo HOM05D000447 ORTHO05D000315 6.0e-06 54.7 63 42.9
ECA238G4410 Erigeron canadensis HOM05D000447 ORTHO05D000315 6.0e-06 54.7 67 35.8
Eucgr.I01579 Eucalyptus grandis HOM05D000447 ORTHO05D000315 6.0e-06 54.7 63 39.7
Lsat_1_v5_gn_2_76880 Lactuca sativa HOM05D000447 ORTHO05D000315 6.0e-06 54.7 63 39.7
Lj7C618G13 Lonicera japonica HOM05D000447 ORTHO05D000315 6.0e-06 54.7 63 41.3
Lalb_Chr02g0156871 Lupinus albus HOM05D000447 ORTHO05D000315 6.0e-06 54.7 67 35.8
Manes.11G079070 Manihot esculenta HOM05D000447 ORTHO05D000315 6.0e-06 54.7 62 38.7
PSO478G5226 Papaver somniferum HOM05D000447 ORTHO05D000315 6.0e-06 54.7 63 39.7
arahy.Tifrunner.gnm1.ann1.CM90T6 Arachis hypogaea HOM05D000447 ORTHO05D000315 7.8e-06 54.3 63 38.1
Duzib264G1088 Durio zibethinus HOM05D000447 ORTHO05D000315 7.8e-06 54.3 63 41.3
ECA238G3101 Erigeron canadensis HOM05D000447 ORTHO05D000315 7.8e-06 54.3 69 36.2
Gohir.A09G000500 Gossypium hirsutum HOM05D000447 ORTHO05D000315 7.8e-06 54.3 63 41.3
Manes.11G075200 Manihot esculenta HOM05D000447 ORTHO05D000315 7.8e-06 54.3 63 42.9
PGSC0003DMG400016873 Solanum tuberosum HOM05D000447 ORTHO05D000315 7.8e-06 54.3 67 35.8


User provided reference genes

Program Settings