Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0005480 Simmondsia chinensis HOM05D000127 ORTHO05D389347 2.2e-45 185.3 93 100.0
EL10Ac2g04914 Beta vulgaris HOM05D000127 ORTHO05D000243 5.6e-09 64.3 44 75.0
AUR62012322 Chenopodium quinoa HOM05D000127 ORTHO05D000243 5.6e-09 64.3 44 75.0
AUR62022962 Chenopodium quinoa HOM05D000127 ORTHO05D000243 1.3e-08 63.2 83 50.6
FvH4_7g25390 Fragaria vesca HOM05D000127 ORTHO05D000243 2.8e-08 62.0 55 54.5
FAN01G1751 Fragaria x ananassa HOM05D000127 ORTHO05D000243 2.8e-08 62.0 55 54.5
FAN10G3736 Fragaria x ananassa HOM05D000127 ORTHO05D000243 2.8e-08 62.0 55 54.5
Lj8C59T6 Lonicera japonica HOM05D000127 ORTHO05D000243 2.8e-08 62.0 44 70.5
Ah.10g036080 Amaranthus hybridus HOM05D000127 ORTHO05D000243 1.1e-07 60.1 41 73.2
Thecc.10G008800 Theobroma cacao HOM05D000127 ORTHO05D000243 1.1e-07 60.1 49 59.2
FAN03G1660 Fragaria x ananassa HOM05D000127 ORTHO05D000243 1.4e-07 59.7 44 63.6
FAN06G4491 Fragaria x ananassa HOM05D000127 ORTHO05D000243 1.8e-07 59.3 54 53.7
Solyc06g050690.3 Solanum lycopersicum HOM05D000127 ORTHO05D000243 2.4e-07 58.9 41 70.7
MD07G1228400 Malus domestica HOM05D000127 ORTHO05D000243 3.1e-07 58.5 41 65.9
Prupe.2G258100 Prunus persica HOM05D000127 ORTHO05D000243 3.1e-07 58.5 41 63.4
TAR633G2318 Trochodendron aralioides HOM05D000127 ORTHO05D000243 3.1e-07 58.5 39 74.4
Potri.010G183000 Populus trichocarpa HOM05D000127 ORTHO05D000243 4.0e-07 58.2 41 70.7
Prupe.6G047400 Prunus persica HOM05D000127 ORTHO05D000243 5.3e-07 57.8 42 69.0
Prupe.6G047500 Prunus persica HOM05D000127 ORTHO05D000243 5.3e-07 57.8 40 65.0
Prupe.6G047600 Prunus persica HOM05D000127 ORTHO05D000243 6.9e-07 57.4 44 61.4
CDE04G0504 Ceratophyllum demersum HOM05D000127 ORTHO05D000243 9.0e-07 57.0 48 64.6
Dinv10572 Davidia involucrata HOM05D000127 ORTHO05D000243 9.0e-07 57.0 49 61.2
Thecc.09G358500 Theobroma cacao HOM05D000127 ORTHO05D000243 9.0e-07 57.0 58 53.4
Sed0025416 Sechium edule HOM05D000127 ORTHO05D000243 1.2e-06 56.6 54 53.7
TWI74G0186 Tripterygium wilfordii HOM05D000127 ORTHO05D011592 1.2e-06 56.6 52 59.6
CAN.G118.16 Capsicum annuum HOM05D000127 ORTHO05D000243 1.5e-06 56.2 41 70.7
Dinv21800 Davidia involucrata HOM05D000127 ORTHO05D000243 1.5e-06 56.2 42 69.0
FAN11G0129 Fragaria x ananassa HOM05D000127 ORTHO05D000243 1.5e-06 56.2 51 52.9
Manes.07G136100 Manihot esculenta HOM05D000127 ORTHO05D000243 1.5e-06 56.2 77 45.5
Hma1.2p1_0292F.1_g115640 Hydrangea macrophylla HOM05D000127 ORTHO05D000243 2.0e-06 55.8 41 70.7
MD11G1059100 Malus domestica HOM05D000127 ORTHO05D000243 2.0e-06 55.8 78 46.2
Peaxi162Scf00284g00220 Petunia axillaris HOM05D000127 ORTHO05D000243 2.0e-06 55.8 41 68.3
Migut.F00618 Erythranthe guttata HOM05D000127 ORTHO05D000243 2.6e-06 55.5 40 65.0
MD03G1057300 Malus domestica HOM05D000127 ORTHO05D000243 2.6e-06 55.5 38 65.8
RcHm_v2.0_Chr1g0371341 Rosa chinensis HOM05D000127 ORTHO05D000243 3.4e-06 55.1 55 47.3
CSS0017699 Camellia sinensis var. sinensis HOM05D000127 ORTHO05D000243 4.4e-06 54.7 41 68.3
CiPaw.01G302800 Carya illinoinensis HOM05D000127 ORTHO05D000243 4.4e-06 54.7 39 64.1
ClCG07G004730 Citrullus lanatus HOM05D000127 ORTHO05D000243 4.4e-06 54.7 41 61.0
MD11G1059200 Malus domestica HOM05D000127 ORTHO05D000243 4.4e-06 54.7 38 63.2
Haze_17298 Corylus avellana HOM05D000127 ORTHO05D000243 5.8e-06 54.3 40 65.0
Sabra10G0140300 Salix brachista HOM05D000127 ORTHO05D000243 5.8e-06 54.3 40 65.0
unitig_37.g11906 Utricularia gibba HOM05D000127 ORTHO05D000243 5.8e-06 54.3 40 62.5
Atru.chr8.2346 Acer truncatum HOM05D000127 ORTHO05D011592 9.9e-06 53.5 66 50.0
Duzib114G1047 Durio zibethinus HOM05D000127 ORTHO05D000243 9.9e-06 53.5 41 58.5
FvH4_3g39831 Fragaria vesca HOM05D000127 ORTHO05D000243 9.9e-06 53.5 40 62.5
Lj1C962G18 Lonicera japonica HOM05D000127 ORTHO05D000243 9.9e-06 53.5 51 58.8
Prupe.6G047700 Prunus persica HOM05D000127 ORTHO05D000243 9.9e-06 53.5 39 66.7
RcHm_v2.0_Chr5g0071781 Rosa chinensis HOM05D000127 ORTHO05D000243 9.9e-06 53.5 43 58.1
TPR.G11835 Trifolium pratense HOM05D000127 ORTHO05D000243 9.9e-06 53.5 41 65.9


User provided reference genes

Program Settings