Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0005350 Simmondsia chinensis HOM05D006144 ORTHO05D006357 2.6e-71 271.9 138 100.0
Sc03g0001430 Simmondsia chinensis HOM05D006144 ORTHO05D006357 4.1e-56 221.5 128 88.3
EL10Ac6g15152 Beta vulgaris HOM05D006144 ORTHO05D006357 3.6e-20 102.1 132 40.2
AUR62001952 Chenopodium quinoa HOM05D006144 ORTHO05D006357 1.4e-19 100.1 131 37.4
Hund13563 Selenicereus undatus HOM05D006144 ORTHO05D006357 2.0e-18 96.3 123 43.1
AUR62003855 Chenopodium quinoa HOM05D006144 ORTHO05D006357 1.4e-16 90.1 131 35.1
Lj4A140T30 Lonicera japonica HOM05D006144 ORTHO05D006357 4.6e-15 85.1 138 36.2
MD15G1281500 Malus domestica HOM05D006144 ORTHO05D006357 1.7e-14 83.2 139 34.5
PGR102G0121 Punica granatum HOM05D006144 ORTHO05D006357 8.6e-14 80.9 139 34.5
Dinv29969 Davidia involucrata HOM05D006144 ORTHO05D006357 2.5e-13 79.3 136 33.8
Duzib147G1467 Durio zibethinus HOM05D006144 ORTHO05D006357 3.3e-13 79.0 133 35.3
Dinv39873 Davidia involucrata HOM05D006144 ORTHO05D006357 4.3e-13 78.6 129 35.7
Glyma.11G057500 Glycine max HOM05D006144 ORTHO05D006357 5.6e-13 78.2 135 34.8
Actinidia12060 Actinidia chinensis HOM05D006144 ORTHO05D006357 9.5e-13 77.4 130 37.7
Phvul.002G020300 Phaseolus vulgaris HOM05D006144 ORTHO05D006357 9.5e-13 77.4 136 35.3
CSS0009151 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 1.6e-12 76.6 135 36.3
CSS0011451 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 1.6e-12 76.6 135 36.3
CiPaw.01G021400 Carya illinoinensis HOM05D006144 ORTHO05D006357 1.6e-12 76.6 123 36.6
MD02G1169100 Malus domestica HOM05D006144 ORTHO05D006357 1.6e-12 76.6 131 33.6
CANSAT01G0270 Cannabis sativa HOM05D006144 ORTHO05D006357 2.1e-12 76.3 134 38.8
Cc07_g05860 Coffea canephora HOM05D006144 ORTHO05D006357 2.1e-12 76.3 132 34.8
Oeu049306.1 Olea europaea HOM05D006144 ORTHO05D006357 2.1e-12 76.3 121 34.7
Thecc.01G052700 Theobroma cacao HOM05D006144 ORTHO05D006357 2.1e-12 76.3 133 33.1
CSS0044544 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 4.7e-12 75.1 127 35.4
Actinidia36503 Actinidia chinensis HOM05D006144 ORTHO05D006357 8.1e-12 74.3 128 35.9
Haze_15426 Corylus avellana HOM05D006144 ORTHO05D006357 1.1e-11 73.9 135 34.1
Oeu003786.1 Olea europaea HOM05D006144 ORTHO05D006357 1.4e-11 73.6 134 32.8
RcHm_v2.0_Chr2g0105021 Rosa chinensis HOM05D006144 ORTHO05D006357 1.4e-11 73.6 137 32.1
VMungo1215G0092 Vigna mungo HOM05D006144 ORTHO05D006357 1.4e-11 73.6 135 33.3
FAN28G0789 Fragaria x ananassa HOM05D006144 ORTHO05D006357 1.8e-11 73.2 136 31.6
arahy.Tifrunner.gnm1.ann1.AH11HU Arachis hypogaea HOM05D006144 ORTHO05D006357 3.1e-11 72.4 132 31.8
arahy.Tifrunner.gnm1.ann1.IY5EPV Arachis hypogaea HOM05D006144 ORTHO05D006357 3.1e-11 72.4 132 31.8
FAN26G0177 Fragaria x ananassa HOM05D006144 ORTHO05D006357 3.1e-11 72.4 136 31.6
Cfa003998 Carpinus fangiana HOM05D006144 ORTHO05D006357 4.0e-11 72.0 130 34.6
FAN23G0857 Fragaria x ananassa HOM05D006144 ORTHO05D006357 1.2e-10 70.5 136 31.6
Prupe.7G136200 Prunus persica HOM05D006144 ORTHO05D006357 1.2e-10 70.5 128 34.4
Ca_24781_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 3.4e-10 68.9 136 30.9
Rhsim10G0119800 Rhododendron simsii HOM05D006144 ORTHO05D006357 3.4e-10 68.9 135 32.6
Nn1g05861 Nelumbo nucifera HOM05D006144 ORTHO05D006357 5.8e-10 68.2 130 30.0
Nitab4.5_0001684g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 5.8e-10 68.2 123 29.3
QL06p042250 Quercus lobata HOM05D006144 ORTHO05D006357 7.5e-10 67.8 79 40.5
FvH4_1g15710 Fragaria vesca HOM05D006144 ORTHO05D006357 9.8e-10 67.4 137 31.4
FAN19G3143 Fragaria x ananassa HOM05D006144 ORTHO05D006357 9.8e-10 67.4 137 31.4
Lalb_Chr16g0388301 Lupinus albus HOM05D006144 ORTHO05D006357 9.8e-10 67.4 131 32.1
Nitab4.5_0000382g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 9.8e-10 67.4 123 28.5
COL.COLO4_22183 Corchorus olitorius HOM05D006144 ORTHO05D006357 1.3e-09 67.0 133 28.6
Lj2g0024358 Lotus japonicus HOM05D006144 ORTHO05D006357 1.3e-09 67.0 137 30.7
Gohir.D11G049700 Gossypium hirsutum HOM05D006144 ORTHO05D006357 1.7e-09 66.6 133 33.1
Gorai.007G053500 Gossypium raimondii HOM05D006144 ORTHO05D006357 1.7e-09 66.6 133 33.1
Peaxi162Scf00183g00711 Petunia axillaris HOM05D006144 ORTHO05D006357 2.9e-09 65.9 126 30.2
Gohir.A11G046100 Gossypium hirsutum HOM05D006144 ORTHO05D006357 3.7e-09 65.5 133 32.3
Migut.H00451 Erythranthe guttata HOM05D006144 ORTHO05D006357 4.9e-09 65.1 130 33.1
TPR.G31101 Trifolium pratense HOM05D006144 ORTHO05D006357 8.3e-09 64.3 130 30.0
Aqoxy6G01406 Aquilegia oxysepala HOM05D006144 ORTHO05D006357 1.1e-08 63.9 117 33.3
Eucgr.H01999 Eucalyptus grandis HOM05D006144 ORTHO05D006357 1.1e-08 63.9 138 30.4
Psat0s3889g0080 Pisum sativum HOM05D006144 ORTHO05D006357 1.1e-08 63.9 106 35.8
TWI09G0039 Tripterygium wilfordii HOM05D006144 ORTHO05D006357 1.4e-08 63.5 138 29.0
Ah.03g144510 Amaranthus hybridus HOM05D006144 ORTHO05D006357 2.4e-08 62.8 120 29.2
PGSC0003DMG400019754 Solanum tuberosum HOM05D006144 ORTHO05D006357 2.4e-08 62.8 127 26.8
vmacro05326 Vaccinium macrocarpon HOM05D006144 ORTHO05D006357 2.4e-08 62.8 135 31.1
SGA_v2.0_scaffold204G41590 Striga asiatica HOM05D006144 ORTHO05D006357 5.4e-08 61.6 129 31.0
Glyma.01G184700 Glycine max HOM05D006144 ORTHO05D006357 7.1e-08 61.2 102 35.3
MSTRG.2895 Avicennia marina HOM05D006144 ORTHO05D006357 9.2e-08 60.8 124 32.3
Manes.12G100500 Manihot esculenta HOM05D006144 ORTHO05D006357 1.2e-07 60.5 133 29.3
Atru.chr3.396 Acer truncatum HOM05D006144 ORTHO05D006357 2.1e-07 59.7 134 26.9
Lalb_Chr09g0333701 Lupinus albus HOM05D006144 ORTHO05D006357 2.3e-06 56.2 105 29.5
Sopen03g008900 Solanum pennellii HOM05D006144 ORTHO05D006357 2.3e-06 56.2 123 25.2
Cpa.g.sc55.178 Carica papaya HOM05D006144 ORTHO05D006357 3.0e-06 55.8 96 32.3
ATR0104G015 Amborella trichopoda HOM05D006144 ORTHO05D006357 3.9e-06 55.5 103 30.1
HPP92_004081 Vanilla planifolia HOM05D006144 ORTHO05D006357 3.9e-06 55.5 126 24.6
Ciclev10024721m.g Citrus clementina HOM05D006144 ORTHO05D006357 5.1e-06 55.1 135 28.1
HPP92_004109 Vanilla planifolia HOM05D006144 ORTHO05D006357 5.1e-06 55.1 126 24.6
DCAR_025720 Daucus carota HOM05D006144 ORTHO05D006357 8.6e-06 54.3 118 29.7


User provided reference genes

Program Settings