Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0005300 Simmondsia chinensis HOM05D012847 ORTHO05D014920 4.5e-52 207.6 101 100.0
CSS0007537 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D024711 5.9e-12 74.3 73 57.5
CSS0039809 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D004854 7.7e-12 73.9 73 57.5
CSS0041785 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D024711 7.7e-12 73.9 73 57.5
Zm00001eb437520 Zea mays HOM05D010106 ORTHO05D000626 8.5e-11 70.5 75 56.0
CDE02G3641 Ceratophyllum demersum HOM05D012847 ORTHO05D014920 9.4e-10 67.0 52 63.5
Sopen00g002260 Solanum pennellii HOM05D000920 ORTHO05D004854 3.6e-09 65.1 61 57.4
CSS0035511 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D004854 6.7e-08 60.8 73 47.9
Lsat_1_v5_gn_4_174220 Lactuca sativa HOM05D012847 ORTHO05D014920 1.1e-07 60.1 54 53.7
A05p22480 Brassica napus HOM05D000920 ORTHO05D000626 2.0e-07 59.3 60 58.3
BNapus_Darmor_BZH_scaffold_107p00020 Brassica napus HOM05D000920 ORTHO05D004854 5.7e-07 57.8 37 81.1
BNapus_Darmor_BZH_scaffold_107p00050 Brassica napus HOM05D000920 ORTHO05D004854 5.7e-07 57.8 37 81.1
Sopen00g001800 Solanum pennellii HOM05D000920 ORTHO05D004854 5.7e-07 57.8 38 76.3
A06p24760 Brassica napus HOM05D000920 ORTHO05D004854 1.7e-06 56.2 37 78.4
Zm00001eb263830 Zea mays HOM05D010106 ORTHO05D000626 1.7e-06 56.2 91 42.9
A05p22020 Brassica napus HOM05D000920 ORTHO05D004854 2.8e-06 55.5 37 75.7
EL10As19g24180 Beta vulgaris HOM05D000920 ORTHO05D004854 3.7e-06 55.1 37 78.4
A05p22350 Brassica napus HOM05D000920 ORTHO05D004854 3.7e-06 55.1 71 49.3
CSS0033051 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D014920 3.7e-06 55.1 73 45.2
Lj5g0000109 Lotus japonicus HOM05D000920 ORTHO05D000626 3.7e-06 55.1 37 78.4
LjContig00488g0002218 Lotus japonicus HOM05D000920 ORTHO05D000626 3.7e-06 55.1 37 78.4
A06p25000 Brassica napus HOM05D000920 ORTHO05D004854 6.3e-06 54.3 37 78.4
A06p24460 Brassica napus HOM05D000920 ORTHO05D004854 8.2e-06 53.9 37 75.7


User provided reference genes

Program Settings