Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0004580 Simmondsia chinensis HOM05D005365 ORTHO05D006910 0.0e+00 1479.2 758 100.0
AUR62018225 Chenopodium quinoa HOM05D005365 ORTHO05D006910 4.7e-279 964.5 747 68.4
EL10Ac2g03189 Beta vulgaris HOM05D005365 ORTHO05D006910 1.0e-278 963.4 748 68.6
CSS0031268 Camellia sinensis var. sinensis HOM05D005365 ORTHO05D006910 2.6e-277 958.7 745 66.4
GSVIVG01014028001 Vitis vinifera HOM05D005365 ORTHO05D006910 1.1e-275 953.4 745 65.6
Dinv19044 Davidia involucrata HOM05D005365 ORTHO05D006910 2.4e-275 952.2 754 65.4
AUR62037789 Chenopodium quinoa HOM05D005365 ORTHO05D006910 7.0e-275 950.7 750 67.5
Ah.10g032430 Amaranthus hybridus HOM05D005365 ORTHO05D006910 3.5e-274 948.3 748 66.8
CiPaw.03G073200 Carya illinoinensis HOM05D005365 ORTHO05D006910 1.3e-273 946.4 749 65.6
Nn4g24353 Nelumbo nucifera HOM05D005365 ORTHO05D006910 1.3e-273 946.4 739 64.4
TAR374G0610 Trochodendron aralioides HOM05D005365 ORTHO05D006910 9.4e-272 940.3 747 65.5
Hund13093 Selenicereus undatus HOM05D005365 ORTHO05D006910 1.6e-271 939.5 717 68.8
Potri.004G085500 Populus trichocarpa HOM05D005365 ORTHO05D006910 3.6e-271 938.3 766 64.4
Cfa007794 Carpinus fangiana HOM05D005365 ORTHO05D006910 6.1e-271 937.6 742 65.4
PSO478G2448 Papaver somniferum HOM05D005365 ORTHO05D006910 4.0e-270 934.9 749 65.2
PSO017G3744 Papaver somniferum HOM05D005365 ORTHO05D006910 5.2e-270 934.5 748 65.1
vmacro07709 Vaccinium macrocarpon HOM05D005365 ORTHO05D006910 4.8e-268 927.9 752 64.9
Actinidia06487 Actinidia chinensis HOM05D005365 ORTHO05D006910 1.1e-267 926.8 744 64.0
Lj2C520T1 Lonicera japonica HOM05D005365 ORTHO05D006910 3.1e-267 925.2 741 64.6
TWI77G0914 Tripterygium wilfordii HOM05D005365 ORTHO05D006910 4.1e-267 924.9 748 64.8
Prupe.3G017700 Prunus persica HOM05D005365 ORTHO05D006910 1.6e-266 922.9 753 64.4
Manes.03G027200 Manihot esculenta HOM05D005365 ORTHO05D006910 3.5e-266 921.8 750 63.7
QL02p059099 Quercus lobata HOM05D005365 ORTHO05D006910 4.5e-266 921.4 851 59.0
Ciclev10010965m.g Citrus clementina HOM05D005365 ORTHO05D006910 5.9e-266 921.0 743 64.7
arahy.Tifrunner.gnm1.ann1.WJY350 Arachis hypogaea HOM05D005365 ORTHO05D006910 7.2e-264 914.1 747 64.3
Glyma.18G041000 Glycine max HOM05D005365 ORTHO05D006910 7.2e-264 914.1 745 63.2
FAN23G0266 Fragaria x ananassa HOM05D005365 ORTHO05D006910 1.2e-263 913.3 748 64.7
FvH4_1g30230 Fragaria vesca HOM05D005365 ORTHO05D006910 1.6e-263 912.9 762 63.5
arahy.Tifrunner.gnm1.ann1.MH7SY7 Arachis hypogaea HOM05D005365 ORTHO05D006910 3.6e-263 911.8 747 64.0
FAN26G1336 Fragaria x ananassa HOM05D005365 ORTHO05D006910 1.0e-262 910.2 746 64.3
Gorai.007G187500 Gossypium raimondii HOM05D005365 ORTHO05D006910 2.3e-262 909.1 744 64.8
MD09G1270700 Malus domestica HOM05D005365 ORTHO05D006910 2.3e-262 909.1 752 63.8
Haze_14277 Corylus avellana HOM05D005365 ORTHO05D006910 4.0e-262 908.3 748 63.4
Glyma.11G215600 Glycine max HOM05D005365 ORTHO05D006910 4.0e-262 908.3 745 63.2
Gohir.D11G174900 Gossypium hirsutum HOM05D005365 ORTHO05D006910 4.0e-262 908.3 744 64.8
Atru.chr1.1986 Acer truncatum HOM05D005365 ORTHO05D006910 8.9e-262 907.1 759 63.0
CANSAT80G2352 Cannabis sativa HOM05D005365 ORTHO05D006910 2.0e-261 906.0 750 63.2
MD17G1268900 Malus domestica HOM05D005365 ORTHO05D006910 4.9e-260 901.4 748 64.0
Hma1.2p1_1583F.1_g291990 Hydrangea macrophylla HOM05D005365 ORTHO05D006910 1.1e-259 900.2 733 64.5
Thecc.04G055200 Theobroma cacao HOM05D005365 ORTHO05D006910 1.8e-259 899.4 747 64.3
Cpa.g.sc116.71 Carica papaya HOM05D005365 ORTHO05D006910 2.4e-259 899.0 744 62.5
Duzib133G0311 Durio zibethinus HOM05D005365 ORTHO05D006910 5.4e-259 897.9 745 64.0
Sopen11g006160 Solanum pennellii HOM05D005365 ORTHO05D006910 7.0e-259 897.5 746 62.1
FAN19G1822 Fragaria x ananassa HOM05D005365 ORTHO05D006910 4.5e-258 894.8 744 64.0
Solyc11g011370.2 Solanum lycopersicum HOM05D005365 ORTHO05D006910 4.5e-258 894.8 746 61.9
ClCG03G008820 Citrullus lanatus HOM05D005365 ORTHO05D006910 7.8e-258 894.0 753 61.9
Phvul.001G229600 Phaseolus vulgaris HOM05D005365 ORTHO05D006910 1.7e-257 892.9 742 63.1
CAN.G222.54 Capsicum annuum HOM05D005365 ORTHO05D006910 8.6e-257 890.6 745 62.0
Ca_17092_v3 Cicer arietinum L. HOM05D005365 ORTHO05D006910 2.5e-256 889.0 752 62.5
Sed0006074 Sechium edule HOM05D005365 ORTHO05D006910 7.3e-256 887.5 750 61.5
Cc07_g13300 Coffea canephora HOM05D005365 ORTHO05D006910 1.6e-255 886.3 748 61.6
Sabra04G0056600 Salix brachista HOM05D005365 ORTHO05D006910 2.8e-255 885.6 753 62.2
Lj6g0003323 Lotus japonicus HOM05D005365 ORTHO05D006910 3.6e-255 885.2 748 61.8
Eucgr.F02871 Eucalyptus grandis HOM05D005365 ORTHO05D006910 6.1e-255 884.4 751 61.8
MELO3C022831.2 Cucumis melo HOM05D005365 ORTHO05D006910 1.0e-254 883.6 745 61.5
CsaV3_5G023940 Cucumis sativus L. HOM05D005365 ORTHO05D006910 1.0e-254 883.6 748 61.6
Medtr3g065300 Medicago truncatula HOM05D005365 ORTHO05D006910 3.1e-254 882.1 745 62.1
CSS0046739 Camellia sinensis var. sinensis HOM05D005365 ORTHO05D006910 4.0e-254 881.7 745 62.8
Aqoxy2G03929 Aquilegia oxysepala HOM05D005365 ORTHO05D006910 6.8e-254 880.9 746 61.1
VMungo1383G2900 Vigna mungo HOM05D005365 ORTHO05D006910 2.0e-253 879.4 745 61.6
MSTRG.15661 Avicennia marina HOM05D005365 ORTHO05D006910 1.7e-252 876.3 743 61.2
Lalb_Chr15g0084951 Lupinus albus HOM05D005365 ORTHO05D006910 3.7e-252 875.2 743 62.2
Psat5g120520 Pisum sativum HOM05D005365 ORTHO05D006910 4.9e-252 874.8 749 61.4
RcHm_v2.0_Chr3g0491161 Rosa chinensis HOM05D005365 ORTHO05D006910 8.3e-252 874.0 731 63.3
Carub.0007s3279 Capsella rubella HOM05D005365 ORTHO05D006910 5.4e-251 871.3 769 60.5
ECA238G2923 Erigeron canadensis HOM05D005365 ORTHO05D006910 1.6e-250 869.8 744 60.3
Gohir.A11G168700 Gossypium hirsutum HOM05D005365 ORTHO05D006910 1.6e-250 869.8 733 63.4
PGR004G1341 Punica granatum HOM05D005365 ORTHO05D006910 2.7e-250 869.0 744 61.3
Nitab4.5_0012785g0010 Nicotiana tabacum HOM05D005365 ORTHO05D006910 3.5e-250 868.6 777 59.6
Sp7g04480 Schrenkiella parvula HOM05D005365 ORTHO05D006910 3.0e-249 865.5 763 60.3
Aa31LG9G17470 Aethionema arabicum HOM05D005365 ORTHO05D006910 6.6e-249 864.4 757 60.2
CARHR215230 Cardamine hirsuta HOM05D005365 ORTHO05D006910 6.6e-249 864.4 754 60.2
Thhalv10027629m.g Eutrema salsugineum HOM05D005365 ORTHO05D006910 1.5e-248 863.2 761 59.9
Rhsim10G0178300 Rhododendron simsii HOM05D005365 ORTHO05D006910 6.8e-246 854.4 740 62.0
Migut.K00918 Erythranthe guttata HOM05D005365 ORTHO05D006910 2.6e-245 852.4 744 59.3
SGA_v2.0_scaffold45G17160 Striga asiatica HOM05D005365 ORTHO05D006910 3.4e-245 852.0 784 56.9
AT5G37630 Arabidopsis thaliana HOM05D005365 ORTHO05D006910 5.8e-245 851.3 765 59.7
Lsat_1_v5_gn_2_68700 Lactuca sativa HOM05D005365 ORTHO05D006910 9.8e-245 850.5 744 59.3
DCAR_028454 Daucus carota HOM05D005365 ORTHO05D006910 1.3e-244 850.1 732 60.2
AL7G46400 Arabidopsis lyrata HOM05D005365 ORTHO05D006910 1.7e-244 849.7 761 59.7
BcaC02g09592 Brassica carinata HOM05D005365 ORTHO05D006910 1.7e-244 849.7 752 59.4
BolC4t26020H Brassica oleracea HOM05D005365 ORTHO05D006910 3.7e-244 848.6 752 59.4
BcaB06g27110 Brassica carinata HOM05D005365 ORTHO05D006910 6.4e-244 847.8 757 58.7
A04p10780 Brassica napus HOM05D005365 ORTHO05D006910 6.4e-244 847.8 754 59.2
BraA04t16742Z Brassica rapa HOM05D005365 ORTHO05D006910 6.4e-244 847.8 754 59.2
CDE05G1264 Ceratophyllum demersum HOM05D005365 ORTHO05D006910 3.2e-243 845.5 749 58.9
C04p44500 Brassica napus HOM05D005365 ORTHO05D006910 1.6e-242 843.2 777 57.9
THA.LOC104805627 Tarenaya hassleriana HOM05D005365 ORTHO05D006910 1.6e-242 843.2 764 59.9
Zm00001eb379890 Zea mays HOM05D005365 ORTHO05D006910 1.0e-241 840.5 746 58.0
Peaxi162Scf00562g00038 Petunia axillaris HOM05D005365 ORTHO05D006910 5.1e-241 838.2 745 59.7
ATR0753G168 Amborella trichopoda HOM05D005365 ORTHO05D006910 1.2e-237 827.0 745 57.6
Ca_17099_v3 Cicer arietinum L. HOM05D005365 ORTHO05D006910 1.3e-233 813.5 752 59.2
MBI19_g22067_MAGBIO Magnolia biondii HOM05D005365 ORTHO05D006910 7.3e-216 754.6 838 51.3
Dinv28185 Davidia involucrata HOM05D005365 ORTHO05D006910 2.1e-210 736.5 549 69.0
Nitab4.5_0000201g0010 Nicotiana tabacum HOM05D005365 ORTHO05D006910 4.9e-204 715.3 746 53.6
TPR.G24911 Trifolium pratense HOM05D005365 ORTHO05D006910 1.0e-196 691.0 568 62.9
HPP92_006138 Vanilla planifolia HOM05D005365 ORTHO05D006910 1.3e-191 674.1 610 59.3
COL.COLO4_13431 Corchorus olitorius HOM05D005365 ORTHO05D006910 7.2e-171 605.1 634 54.9
unitig_0.g2645 Utricularia gibba HOM05D005365 ORTHO05D006910 2.6e-160 570.1 743 45.4
Actinidia17204 Actinidia chinensis HOM05D005365 ORTHO05D006910 1.1e-158 564.7 422 65.4
Pp3c22_14670 Physcomitrium patens HOM05D005365 ORTHO05D006910 1.5e-152 544.3 748 42.0
Mapoly0032s0119 Marchantia polymorpha HOM05D005365 ORTHO05D006910 5.2e-145 519.2 752 40.8
SMO367G0263 Selaginella moellendorffii HOM05D005365 ORTHO05D006910 6.2e-138 495.7 738 41.6
PGSC0003DMG400013306 Solanum tuberosum HOM05D005365 ORTHO05D006910 5.0e-132 476.1 378 63.0
AagrBONN_evm.TU.Sc2ySwM_228.4009 Anthoceros agrestis HOM05D005365 ORTHO05D006910 5.6e-131 472.6 758 38.9
SEGI_16018 Sequoiadendron giganteum HOM05D005365 ORTHO05D006910 2.3e-124 450.7 417 55.2
GSVIVG01038363001 Vitis vinifera HOM05D005365 ORTHO05D006910 2.4e-118 430.6 332 64.5
Thhalv10027679m.g Eutrema salsugineum HOM05D005365 ORTHO05D006910 3.2e-94 350.5 378 52.1
SEGI_18021 Sequoiadendron giganteum HOM05D005365 ORTHO05D006910 8.4e-87 325.9 315 54.6
GSVIVG01038362001 Vitis vinifera HOM05D005365 ORTHO05D006910 8.4e-87 325.9 247 67.6
arahy.Tifrunner.gnm1.ann1.MFZI3Y Arachis hypogaea HOM05D005365 ORTHO05D006910 6.1e-77 293.1 233 62.7
MCO13G329 Micromonas commoda HOM05D005365 ORTHO05D006910 2.8e-74 284.3 763 29.9
CBR_g39392 Chara braunii HOM05D000019 ORTHO05D000048 2.9e-71 274.2 442 37.3
Oeu012494.1 Olea europaea HOM05D005365 ORTHO05D006910 1.3e-66 258.8 232 62.5
CDE05G3412 Ceratophyllum demersum HOM05D005365 ORTHO05D006910 1.5e-64 251.9 220 60.0
arahy.Tifrunner.gnm1.ann1.4TMU9W Arachis hypogaea HOM05D005365 ORTHO05D006910 2.0e-64 251.5 200 62.0
MBI19_g43231_MAGBIO Magnolia biondii HOM05D005365 ORTHO05D006910 7.9e-61 239.6 234 56.8
PRCOL_00005851 Prasinoderma coloniale HOM05D005365 ORTHO05D006910 2.6e-56 224.6 768 28.0
SGA_v2.0_scaffold45G17195 Striga asiatica HOM05D005365 ORTHO05D006910 2.4e-41 174.9 179 52.5
GSVIVG01030692001 Vitis vinifera HOM05D005365 ORTHO05D006910 9.1e-41 172.9 134 68.7
SGA_v2.0_scaffold45G17196 Striga asiatica HOM05D005365 ORTHO05D006910 2.9e-39 167.9 108 77.8
Oeu012492.1 Olea europaea HOM05D005365 ORTHO05D006910 1.0e-36 159.5 121 65.3
Os06g0256000 Oryza sativa ssp. japonica HOM05D005365 ORTHO05D006910 2.6e-27 128.3 114 55.3
CAN.G691.4 Capsicum annuum HOM05D005365 ORTHO05D006910 3.1e-20 104.8 148 43.9
Nn1g00453 Nelumbo nucifera HOM05D005365 ORTHO05D006910 8.9e-20 103.2 64 75.0
Psat1g154520 Pisum sativum HOM05D005365 ORTHO05D006910 7.5e-19 100.1 86 60.5
Cfa023924 Carpinus fangiana HOM05D005365 ORTHO05D006910 1.1e-17 96.3 786 20.9
Gorai.005G096400 Gossypium raimondii HOM05D005365 ORTHO05D015145 3.0e-15 88.2 68 64.7
GSVIVG01030691001 Vitis vinifera HOM05D005365 ORTHO05D006910 5.0e-15 87.4 70 61.4
Gohir.D04G112220 Gossypium hirsutum HOM05D005365 ORTHO05D006910 1.1e-14 86.3 67 64.2
SEGI_04861 Sequoiadendron giganteum HOM05D005365 ORTHO05D006910 2.2e-10 72.0 79 49.4
Psat7g195800 Pisum sativum HOM05D005365 ORTHO05D006910 4.9e-10 70.9 75 53.3
TPR.G7041 Trifolium pratense HOM05D005365 ORTHO05D006910 3.5e-08 64.7 51 66.7


User provided reference genes

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