Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0004560 Simmondsia chinensis HOM05D006714 ORTHO05D008103 0.0e+00 1384.4 687 100.0
Hund13103 Selenicereus undatus HOM05D006714 ORTHO05D008103 8.6e-123 445.3 654 45.9
EL10Ac2g03178 Beta vulgaris HOM05D006714 ORTHO05D008103 2.1e-113 414.1 639 41.3
Dinv28198 Davidia involucrata HOM05D006714 ORTHO05D008103 3.2e-101 373.6 534 44.8
Dinv19038 Davidia involucrata HOM05D006714 ORTHO05D008103 5.5e-101 372.9 506 46.2
Prupe.4G281200 Prunus persica HOM05D006714 ORTHO05D008103 1.8e-99 367.9 647 41.3
GSVIVG01030704001 Vitis vinifera HOM05D006714 ORTHO05D008103 1.3e-97 361.7 651 39.2
AUR62018218 Chenopodium quinoa HOM05D006714 ORTHO05D008103 6.2e-97 359.4 360 54.2
Cfa007804 Carpinus fangiana HOM05D006714 ORTHO05D008103 2.7e-92 344.0 666 37.8
RcHm_v2.0_Chr2g0123431 Rosa chinensis HOM05D006714 ORTHO05D008103 1.0e-91 342.0 653 38.6
Rhsim08G0018800 Rhododendron simsii HOM05D006714 ORTHO05D008103 1.5e-90 338.2 635 37.8
Haze_14269 Corylus avellana HOM05D006714 ORTHO05D008103 2.5e-90 337.4 623 39.8
AUR62037796 Chenopodium quinoa HOM05D006714 ORTHO05D008103 7.4e-90 335.9 458 44.3
MD15G1138100 Malus domestica HOM05D006714 ORTHO05D008103 1.6e-89 334.7 664 37.0
CANSAT78G1609 Cannabis sativa HOM05D006714 ORTHO05D008103 5.3e-88 329.7 485 44.7
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 5.3e-88 329.7 646 36.7
TWI77G0889 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 5.3e-88 329.7 530 40.0
vmacro18531 Vaccinium macrocarpon HOM05D006714 ORTHO05D008103 3.4e-87 327.0 407 48.4
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla HOM05D006714 ORTHO05D008103 1.7e-86 324.7 328 55.8
Nitab4.5_0000201g0160 Nicotiana tabacum HOM05D006714 ORTHO05D008103 1.7e-86 324.7 293 58.4
Thecc.04G114100 Theobroma cacao HOM05D006714 ORTHO05D008103 1.7e-86 324.7 322 54.7
FvH4_1g25400 Fragaria vesca HOM05D006714 ORTHO05D008103 3.8e-86 323.6 494 41.7
FAN23G2031 Fragaria x ananassa HOM05D006714 ORTHO05D008103 1.1e-85 322.0 669 36.8
Sabra17G0108600 Salix brachista HOM05D006714 ORTHO05D008103 1.1e-85 322.0 309 54.7
Medtr5g078170 Medicago truncatula HOM05D006714 ORTHO05D008103 4.2e-85 320.1 494 41.7
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea HOM05D006714 ORTHO05D008103 5.5e-85 319.7 439 43.7
Potri.017G130400 Populus trichocarpa HOM05D006714 ORTHO05D008103 9.3e-85 318.9 309 54.7
QL10p014398 Quercus lobata HOM05D006714 ORTHO05D008103 9.3e-85 318.9 390 48.2
Nn4g24295 Nelumbo nucifera HOM05D006714 ORTHO05D008103 1.6e-84 318.2 515 41.4
TPR.G8266 Trifolium pratense HOM05D006714 ORTHO05D008103 2.7e-84 317.4 590 37.8
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea HOM05D006714 ORTHO05D008103 3.6e-84 317.0 473 42.3
Duzib211G0559 Durio zibethinus HOM05D006714 ORTHO05D008103 7.9e-84 315.8 498 41.2
QL02p058308 Quercus lobata HOM05D006714 ORTHO05D008103 7.9e-84 315.8 390 47.9
LjContig00141g0000721 Lotus japonicus HOM05D006714 ORTHO05D008103 1.3e-83 315.1 465 43.0
Gohir.A07G178400 Gossypium hirsutum HOM05D006714 ORTHO05D008103 1.8e-83 314.7 292 57.5
CiPaw.03G072500 Carya illinoinensis HOM05D006714 ORTHO05D008103 2.3e-83 314.3 333 51.7
Migut.K00904 Erythranthe guttata HOM05D006714 ORTHO05D008103 2.3e-83 314.3 286 57.3
Gorai.001G205100 Gossypium raimondii HOM05D006714 ORTHO05D008103 2.3e-83 314.3 292 57.2
Gohir.D07G184700 Gossypium hirsutum HOM05D006714 ORTHO05D008103 3.0e-83 313.9 292 57.2
Cc07_g13380 Coffea canephora HOM05D006714 ORTHO05D008103 5.1e-83 313.2 287 56.4
TWI74G0031 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 5.1e-83 313.2 288 56.9
Ciclev10011142m.g Citrus clementina HOM05D006714 ORTHO05D008103 8.7e-83 312.4 505 41.8
TAR629G3521 Trochodendron aralioides HOM05D006714 ORTHO05D008103 1.1e-82 312.0 379 49.3
FAN26G1526 Fragaria x ananassa HOM05D006714 ORTHO05D008103 1.9e-82 311.2 670 35.7
Manes.02G077300 Manihot esculenta HOM05D006714 ORTHO05D008103 7.4e-82 309.3 312 52.2
CsaV3_5G024210 Cucumis sativus L. HOM05D006714 ORTHO05D008103 2.8e-81 307.4 448 42.2
HanXRQChr15g0483231 Helianthus annuus HOM05D006714 ORTHO05D008103 5.3e-80 303.1 427 43.6
Ca_05830_v3 Cicer arietinum L. HOM05D006714 ORTHO05D008103 9.0e-80 302.4 479 40.5
Glyma.14G214400 Glycine max HOM05D006714 ORTHO05D008103 9.0e-80 302.4 456 42.8
VMungo0647G1195 Vigna mungo HOM05D006714 ORTHO05D008103 2.0e-79 301.2 457 42.9
SalBow5G2523 Salvia bowleyana HOM05D006714 ORTHO05D008103 5.9e-79 299.7 297 54.2
CAN.G222.36 Capsicum annuum HOM05D006714 ORTHO05D008103 2.9e-78 297.4 294 54.8
ECA247G1081 Erigeron canadensis HOM05D006714 ORTHO05D008103 2.9e-78 297.4 442 42.5
THA.LOC104820908 Tarenaya hassleriana HOM05D006714 ORTHO05D008103 5.0e-78 296.6 252 58.3
Oeu032319.1 Olea europaea HOM05D006714 ORTHO05D008103 6.5e-78 296.2 203 69.5
Lalb_Chr04g0251401 Lupinus albus HOM05D006714 ORTHO05D008103 1.1e-77 295.4 491 40.1
Sed0011157 Sechium edule HOM05D006714 ORTHO05D008103 1.4e-77 295.0 455 41.1
ClCG01G008770 Citrullus lanatus HOM05D006714 ORTHO05D008103 7.9e-76 289.3 447 40.0
SGA_v2.0_scaffold45G17176 Striga asiatica HOM05D006714 ORTHO05D008103 1.4e-75 288.5 517 39.3
Nitab4.5_0006893g0050 Nicotiana tabacum HOM05D006714 ORTHO05D008103 3.3e-74 283.9 469 41.4
Aa31LG11G13040 Aethionema arabicum HOM05D006714 ORTHO05D008103 4.3e-74 283.5 282 51.8
Solyc11g011060.3 Solanum lycopersicum HOM05D006714 ORTHO05D008103 5.7e-74 283.1 293 52.9
PSO017G5883 Papaver somniferum HOM05D006714 ORTHO05D008103 1.3e-73 282.0 293 50.9
Thhalv10012945m.g Eutrema salsugineum HOM05D006714 ORTHO05D008103 2.2e-73 281.2 278 56.8
Carub.0006s1481 Capsella rubella HOM05D006714 ORTHO05D008103 2.8e-73 280.8 278 55.4
DCAR_014171 Daucus carota HOM05D006714 ORTHO05D008103 2.8e-73 280.8 498 39.0
Sopen11g005830 Solanum pennellii HOM05D006714 ORTHO05D008103 2.8e-73 280.8 293 52.6
AT5G16610 Arabidopsis thaliana HOM05D006714 ORTHO05D008103 4.8e-73 280.0 459 41.0
PSO478G0421 Papaver somniferum HOM05D006714 ORTHO05D008103 1.4e-72 278.5 289 50.5
Sp6g27560 Schrenkiella parvula HOM05D006714 ORTHO05D008103 1.4e-72 278.5 280 56.4
Cpa.g.sc116.59 Carica papaya HOM05D006714 ORTHO05D008103 2.4e-72 277.7 197 67.5
CARHR196610 Cardamine hirsuta HOM05D006714 ORTHO05D008103 2.0e-71 274.6 251 57.8
AL6G27570 Arabidopsis lyrata HOM05D006714 ORTHO05D008103 1.7e-70 271.6 250 58.4
PGR031G2162 Punica granatum HOM05D006714 ORTHO05D008103 1.7e-70 271.6 329 47.4
Aqoxy1G00382 Aquilegia oxysepala HOM05D006714 ORTHO05D008103 1.1e-69 268.9 300 52.3
Lsat_1_v5_gn_3_63641 Lactuca sativa HOM05D006714 ORTHO05D008103 2.0e-66 258.1 468 39.5
Actinidia28805 Actinidia chinensis HOM05D006714 ORTHO05D008103 4.1e-64 250.4 313 47.6
C09p60510 Brassica napus HOM05D006714 ORTHO05D008103 2.2e-62 244.6 195 61.5
BolC9t58884H Brassica oleracea HOM05D006714 ORTHO05D008103 2.2e-62 244.6 195 61.5
A10p22600 Brassica napus HOM05D006714 ORTHO05D008103 1.5e-61 241.9 195 61.0
BraA10t44322Z Brassica rapa HOM05D006714 ORTHO05D008103 1.5e-61 241.9 195 61.0
BcaB08g36834 Brassica carinata HOM05D006714 ORTHO05D008103 4.7e-60 236.9 221 55.7
HPP92_011112 Vanilla planifolia HOM05D006714 ORTHO05D008103 7.5e-58 229.6 279 46.6
ATR0171G009 Amborella trichopoda HOM05D006714 ORTHO05D008103 8.2e-57 226.1 248 50.0
Psat2g047840 Pisum sativum HOM05D006714 ORTHO05D008103 1.1e-56 225.7 236 49.6
HPP92_011097 Vanilla planifolia HOM05D006714 ORTHO05D008103 2.7e-55 221.1 280 46.4
unitig_748.g8636 Utricularia gibba HOM05D006714 ORTHO05D008103 1.7e-54 218.4 236 51.3
CDE07G1834 Ceratophyllum demersum HOM05D006714 ORTHO05D008103 1.5e-53 215.3 256 46.9
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 3.2e-53 214.2 195 54.4
Os03g0221300 Oryza sativa ssp. japonica HOM05D006714 ORTHO05D008103 2.1e-52 211.5 219 49.8
SEGI_28129 Sequoiadendron giganteum HOM05D006714 ORTHO05D008103 3.0e-51 207.6 259 44.4
Peaxi162Scf00305g00412 Petunia axillaris HOM05D006714 ORTHO05D008103 5.2e-51 206.8 128 75.8
QL93p0100_0731 Quercus lobata HOM05D006714 ORTHO05D008103 5.2e-51 206.8 132 72.0
Atru.chr1.1942 Acer truncatum HOM05D006714 ORTHO05D008103 1.3e-49 202.2 121 76.9
Eucgr.F02863 Eucalyptus grandis HOM05D006714 ORTHO05D008103 4.1e-48 197.2 119 77.3
SalBow5G2948 Salvia bowleyana HOM05D006714 ORTHO05D008103 4.1e-48 197.2 286 43.0
PSO063G0106 Papaver somniferum HOM05D006714 ORTHO05D008103 3.5e-47 194.1 145 63.4
Phvul.008G236600 Phaseolus vulgaris HOM05D006714 ORTHO05D008103 1.3e-41 175.6 387 35.7
Pp3c23_20330 Physcomitrium patens HOM05D006714 ORTHO05D008103 4.1e-40 170.6 180 48.3
Pp3c24_16350 Physcomitrium patens HOM05D006714 ORTHO05D008103 3.8e-38 164.1 189 47.6
CBR_g12792 Chara braunii HOM05D006714 ORTHO05D008103 1.0e-35 156.0 190 42.1
CSS0036373 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 1.0e-30 139.4 253 39.1
CSS0024067 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 3.9e-30 137.5 301 35.9
QL93p0100_0723 Quercus lobata HOM05D006714 ORTHO05D008103 3.3e-29 134.4 240 40.0
Actinidia35727 Actinidia chinensis HOM05D006714 ORTHO05D008103 6.2e-28 130.2 377 31.3
SMO340G0205 Selaginella moellendorffii HOM05D006714 ORTHO05D008103 2.2e-25 121.7 118 48.3
Peaxi162Scf00305g00413 Petunia axillaris HOM05D006714 ORTHO05D008103 2.4e-24 118.2 209 38.3
MELO3C022869.2 Cucumis melo HOM05D006714 ORTHO05D008103 4.6e-23 114.0 330 31.8


User provided reference genes

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