Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0004340 Simmondsia chinensis HOM05D008490 ORTHO05D010725 2.9e-131 471.9 234 100.0
TPR.G7850 Trifolium pratense HOM05D008490 ORTHO05D010725 1.1e-64 250.8 190 71.6
unitig_87.g27953 Utricularia gibba HOM05D008490 ORTHO05D010725 2.5e-61 239.6 200 69.0
Sc25g0002270 Simmondsia chinensis HOM05D008490 ORTHO05D010725 8.2e-57 224.6 164 73.8
Sed0016837 Sechium edule HOM05D008490 ORTHO05D010725 6.3e-49 198.4 160 68.8
Sc14g0003240 Simmondsia chinensis HOM05D008490 ORTHO05D010725 1.2e-47 194.1 99 97.0
CSS0048923 Camellia sinensis var. sinensis HOM05D008490 ORTHO05D010725 7.7e-47 191.4 99 96.0
ECA039G0024 Erigeron canadensis HOM05D008490 ORTHO05D010725 7.7e-47 191.4 99 96.0
Psat4g185480 Pisum sativum HOM05D008490 ORTHO05D010725 7.7e-47 191.4 99 96.0
Actinidia34838 Actinidia chinensis HOM05D008490 ORTHO05D010725 5.0e-46 188.7 98 94.9
arahy.Tifrunner.gnm1.ann1.BZJ16Q Arachis hypogaea HOM05D008490 ORTHO05D010725 8.5e-46 188.0 97 94.8
arahy.Tifrunner.gnm1.ann1.PAX1AS Arachis hypogaea HOM05D008490 ORTHO05D010725 8.5e-46 188.0 97 94.8
VMungo0329G0002 Vigna mungo HOM05D008490 ORTHO05D010725 8.5e-46 188.0 99 94.9
Sed0023681 Sechium edule HOM05D008490 ORTHO05D010725 2.5e-45 186.4 99 93.9
Lsat_1_v5_gn_5_16680 Lactuca sativa HOM05D008490 ORTHO05D010725 4.6e-44 182.2 99 91.9
Lj5g0013341 Lotus japonicus HOM05D008490 ORTHO05D010725 7.9e-44 181.4 95 93.7
LjContig00439g0024223 Lotus japonicus HOM05D008490 ORTHO05D010725 7.9e-44 181.4 95 93.7
Sopen00g006810 Solanum pennellii HOM05D008490 ORTHO05D010725 7.9e-44 181.4 98 91.8
Lj5g0002635 Lotus japonicus HOM05D008490 ORTHO05D010725 7.2e-37 158.3 95 83.2
MBI05_g05344_MAGBIO Magnolia biondii HOM05D008490 ORTHO05D010725 6.1e-36 155.2 78 94.9
Nitab4.5_0000172g1820 Nicotiana tabacum HOM05D008490 ORTHO05D010725 1.8e-35 153.7 142 62.7
arahy.Tifrunner.gnm1.ann1.38FWT1 Arachis hypogaea HOM05D008490 ORTHO05D010725 5.9e-31 138.7 137 58.4
Peaxi162Scf00000g58015 Petunia axillaris HOM05D008490 ORTHO05D010725 1.9e-29 133.7 73 91.8
PGSC0003DMG400004057 Solanum tuberosum HOM05D008490 ORTHO05D010725 1.8e-27 127.1 69 89.9
Hma1.2p1_0621F.1_g190810 Hydrangea macrophylla HOM05D008490 ORTHO05D010725 5.7e-26 122.1 58 100.0
MBI05_g40994_MAGBIO Magnolia biondii HOM05D008490 ORTHO05D010725 5.9e-23 112.1 52 100.0
Peaxi162Scf00677g00334 Petunia axillaris HOM05D008490 ORTHO05D010725 3.2e-21 106.3 65 84.6
CSS0002229 Camellia sinensis var. sinensis HOM05D008490 ORTHO05D010725 2.7e-20 103.2 98 60.2
Nitab4.5_0004632g0020 Nicotiana tabacum HOM05D008490 ORTHO05D010725 3.4e-18 96.3 63 74.6
MBI14_g38259_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D010725 2.2e-17 93.6 57 80.7
Hma1.2p1_0435F.1_g152380 Hydrangea macrophylla HOM05D008490 ORTHO05D010725 3.1e-16 89.7 48 89.6
arahy.Tifrunner.gnm1.ann1.GRFW67 Arachis hypogaea HOM05D008490 ORTHO05D010725 7.0e-16 88.6 53 81.1
Peaxi162Scf00477g00823 Petunia axillaris HOM05D008490 ORTHO05D010725 4.5e-15 85.9 46 89.1
CDE02G3985 Ceratophyllum demersum HOM05D008490 ORTHO05D010725 3.8e-14 82.8 84 58.3
Ca_26709_v3 Cicer arietinum L. HOM05D010881 ORTHO05D026827 8.0e-12 75.1 40 90.0
Actinidia34941 Actinidia chinensis HOM05D008490 ORTHO05D010725 2.3e-11 73.6 32 100.0
MBI16_g26183_MAGBIO Magnolia biondii HOM05D001356 ORTHO05D008843 8.3e-09 65.1 36 88.9
Medtr3g463160 Medicago truncatula HOM05D021415 ORTHO05D010725 1.2e-07 61.2 31 87.1
Nitab4.5_0012234g0070 Nicotiana tabacum HOM05D008931 ORTHO05D010933 1.6e-07 60.8 53 56.6
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 2.0e-07 60.5 37 73.0
CBR_g3174 Chara braunii HOM05D008490 ORTHO05D010725 3.5e-07 59.7 40 77.5
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 7.8e-07 58.5 34 76.5
C05p52630 Brassica napus HOM05D008490 ORTHO05D010725 1.3e-06 57.8 30 93.3
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.7e-06 57.4 33 75.8
Nitab4.5_0006476g0030 Nicotiana tabacum HOM05D008490 ORTHO05D010725 1.7e-06 57.4 31 87.1
Nitab4.5_0005637g0050 Nicotiana tabacum HOM05D011380 ORTHO05D016005 2.3e-06 57.0 47 61.7
Nitab4.5_0001761g0030 Nicotiana tabacum HOM05D008931 ORTHO05D010933 2.9e-06 56.6 35 71.4


User provided reference genes

Program Settings