Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0004310 Simmondsia chinensis HOM05D001436 ORTHO05D000880 3.6e-106 388.3 197 100.0
QL05p012956 Quercus lobata HOM05D000047 ORTHO05D000044 1.2e-16 90.9 160 35.0
QL08p065228 Quercus lobata HOM05D000047 ORTHO05D000044 1.2e-16 90.9 160 35.0
QL11p049215 Quercus lobata HOM05D000047 ORTHO05D000044 1.5e-16 90.5 160 35.0
QL93p0205_0258 Quercus lobata HOM05D000047 ORTHO05D000044 4.5e-16 89.0 160 33.8
AUR62025521 Chenopodium quinoa HOM05D000429 ORTHO05D000880 9.4e-14 81.3 143 34.3
arahy.Tifrunner.gnm1.ann1.UC2LFY Arachis hypogaea HOM05D000429 ORTHO05D000352 2.7e-13 79.7 173 31.2
CSS0022880 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 1.8e-12 77.0 145 33.1
Sc11g0004640 Simmondsia chinensis HOM05D001436 ORTHO05D000880 2.3e-12 76.6 94 43.6
arahy.Tifrunner.gnm1.ann1.99K3J2 Arachis hypogaea HOM05D000047 ORTHO05D000044 3.0e-12 76.3 148 33.1
COL.COLO4_08698 Corchorus olitorius HOM05D001436 ORTHO05D000880 3.9e-12 75.9 157 33.1
CSS0029770 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 5.2e-12 75.5 144 32.6
CSS0002549 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 2.6e-11 73.2 145 33.8
COL.COLO4_24943 Corchorus olitorius HOM05D000429 ORTHO05D000880 4.1e-09 65.9 148 29.1
arahy.Tifrunner.gnm1.ann1.2GNH2V Arachis hypogaea HOM05D000429 ORTHO05D000880 7.0e-09 65.1 132 31.8
Ah.04g156040 Amaranthus hybridus HOM05D009849 ORTHO05D000880 9.1e-09 64.7 176 26.7
arahy.Tifrunner.gnm1.ann1.6D2RJL Arachis hypogaea HOM05D000429 ORTHO05D000880 1.6e-08 63.9 143 31.5
Oeu057826.1 Olea europaea HOM05D000047 ORTHO05D000044 2.6e-08 63.2 154 31.8
FvH4_3g17101 Fragaria vesca HOM05D000429 ORTHO05D000352 2.2e-07 60.1 148 29.1
Rhsim05G0128200 Rhododendron simsii HOM05D001436 ORTHO05D000880 2.9e-07 59.7 156 25.0
arahy.Tifrunner.gnm1.ann1.6EH8Q5 Arachis hypogaea HOM05D000429 ORTHO05D000880 3.8e-07 59.3 133 29.3
COL.COLO4_19353 Corchorus olitorius HOM05D000013 ORTHO05D000011 1.9e-06 57.0 131 32.8
HanXRQChr10g0295011 Helianthus annuus HOM05D000047 ORTHO05D000044 3.2e-06 56.2 178 28.7
HanXRQChr10g0289431 Helianthus annuus HOM05D000429 ORTHO05D000880 4.2e-06 55.8 155 29.0
HanXRQChr02g0044181 Helianthus annuus HOM05D003069 ORTHO05D002578 5.5e-06 55.5 178 28.7


User provided reference genes

Program Settings