Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0004250 Simmondsia chinensis HOM05D000367 ORTHO05D037473 9.3e-33 142.9 70 100.0
Sc01g0005330 Simmondsia chinensis HOM05D000367 ORTHO05D037473 5.7e-22 107.1 76 75.0
Sc12g0008740 Simmondsia chinensis HOM05D000367 ORTHO05D001438 2.1e-16 88.6 47 89.4
ECA234G2864 Erigeron canadensis HOM05D000367 ORTHO05D001438 1.1e-14 82.8 48 79.2
HanXRQChr10g0302831 Helianthus annuus HOM05D000367 ORTHO05D001438 1.1e-14 82.8 48 79.2
HanXRQChr12g0361561 Helianthus annuus HOM05D000367 ORTHO05D001438 1.1e-14 82.8 48 79.2
Lsat_1_v5_gn_5_131441 Lactuca sativa HOM05D000367 ORTHO05D001438 1.1e-14 82.8 48 79.2
Aqoxy7G01860 Aquilegia oxysepala HOM05D000367 ORTHO05D001438 1.5e-14 82.4 48 77.1
Hund06553 Selenicereus undatus HOM05D000367 ORTHO05D001438 1.5e-14 82.4 47 83.0
Actinidia15977 Actinidia chinensis HOM05D000367 ORTHO05D001438 2.0e-14 82.0 47 80.9
Hma1.2p1_0242F.1_g100660 Hydrangea macrophylla HOM05D000367 ORTHO05D001438 2.0e-14 82.0 47 80.9
FAN09G1569 Fragaria x ananassa HOM05D000367 ORTHO05D001438 2.6e-14 81.6 48 79.2
Peaxi162Scf00332g00632 Petunia axillaris HOM05D000367 ORTHO05D001438 2.6e-14 81.6 48 79.2
CAN.G407.75 Capsicum annuum HOM05D000367 ORTHO05D001438 3.3e-14 81.3 48 79.2
PGR031G2348 Punica granatum HOM05D000367 ORTHO05D001438 3.3e-14 81.3 47 80.9
MD17G1213500 Malus domestica HOM05D000367 ORTHO05D001438 4.4e-14 80.9 48 79.2
Rhsim12G0190700 Rhododendron simsii HOM05D000367 ORTHO05D001438 4.4e-14 80.9 47 78.7
Dinv30615 Davidia involucrata HOM05D000367 ORTHO05D001438 5.7e-14 80.5 47 78.7
Lj5A74G67 Lonicera japonica HOM05D000367 ORTHO05D001438 5.7e-14 80.5 48 75.0
Nn8g39531 Nelumbo nucifera HOM05D001442 ORTHO05D001438 5.7e-14 80.5 47 76.6
Solyc03g116790.4 Solanum lycopersicum HOM05D000367 ORTHO05D001438 5.7e-14 80.5 48 75.0
Sopen03g035710 Solanum pennellii HOM05D000367 ORTHO05D001438 5.7e-14 80.5 48 75.0
vmacro16889 Vaccinium macrocarpon HOM05D000367 ORTHO05D001438 5.7e-14 80.5 47 80.9
Cc04_g04480 Coffea canephora HOM05D000367 ORTHO05D001438 7.4e-14 80.1 48 75.0
FvH4_6g29530 Fragaria vesca HOM05D000367 ORTHO05D001438 7.4e-14 80.1 47 78.7
FAN02G2757 Fragaria x ananassa HOM05D000367 ORTHO05D001438 7.4e-14 80.1 47 78.7
EL10Ac9g21879 Beta vulgaris HOM05D000367 ORTHO05D001438 9.7e-14 79.7 47 78.7
Eucgr.J03072 Eucalyptus grandis HOM05D000367 ORTHO05D001438 9.7e-14 79.7 47 76.6
MBI15_g41550_MAGBIO Magnolia biondii HOM05D000367 ORTHO05D001438 9.7e-14 79.7 47 80.9
Actinidia08793 Actinidia chinensis HOM05D000367 ORTHO05D001438 1.3e-13 79.3 47 76.6
Zm00001eb258200 Zea mays HOM05D000367 ORTHO05D001438 1.3e-13 79.3 47 78.7
Oeu018808.1 Olea europaea HOM05D000367 ORTHO05D001438 1.7e-13 79.0 48 75.0
PSO017G4937 Papaver somniferum HOM05D000367 ORTHO05D001438 1.7e-13 79.0 47 74.5
PSO170G0494 Papaver somniferum HOM05D000367 ORTHO05D001438 1.7e-13 79.0 47 74.5
RcHm_v2.0_Chr2g0135071 Rosa chinensis HOM05D000367 ORTHO05D001438 1.7e-13 79.0 48 75.0
Haze_16570 Corylus avellana HOM05D000367 ORTHO05D001438 2.2e-13 78.6 47 76.6
DCAR_025519 Daucus carota HOM05D000367 ORTHO05D001438 2.2e-13 78.6 47 76.6
Dinv38128 Davidia involucrata HOM05D000367 ORTHO05D001438 2.2e-13 78.6 47 76.6
Sed0006472 Sechium edule HOM05D000367 ORTHO05D001438 2.2e-13 78.6 47 74.5
Migut.D01083 Erythranthe guttata HOM05D000367 ORTHO05D001438 2.8e-13 78.2 48 77.1
Nitab4.5_0003463g0030 Nicotiana tabacum HOM05D000367 ORTHO05D001438 2.8e-13 78.2 48 75.0
Nitab4.5_0008560g0040 Nicotiana tabacum HOM05D000367 ORTHO05D001438 2.8e-13 78.2 48 75.0
Lj3g0006241 Lotus japonicus HOM05D000367 ORTHO05D001438 3.7e-13 77.8 47 74.5
VMungo1080G1849 Vigna mungo HOM05D000367 ORTHO05D001438 3.7e-13 77.8 47 76.6
arahy.Tifrunner.gnm1.ann1.HU2JKE Arachis hypogaea HOM05D000367 ORTHO05D001438 4.8e-13 77.4 47 72.3
arahy.Tifrunner.gnm1.ann1.L74AP1 Arachis hypogaea HOM05D000367 ORTHO05D001438 4.8e-13 77.4 47 72.3
Cfa001954 Carpinus fangiana HOM05D000367 ORTHO05D001438 4.8e-13 77.4 47 74.5
AUR62016329 Chenopodium quinoa HOM05D000367 ORTHO05D001438 4.8e-13 77.4 47 70.2
CANSAT56G1125 Cannabis sativa HOM05D000367 ORTHO05D001438 6.3e-13 77.0 48 75.0
FAN05G0721 Fragaria x ananassa HOM05D000367 ORTHO05D001438 6.3e-13 77.0 47 76.6
QL05p030721 Quercus lobata HOM05D000367 ORTHO05D001438 6.3e-13 77.0 47 74.5
TWI18G1067 Tripterygium wilfordii HOM05D000367 ORTHO05D001438 6.3e-13 77.0 47 74.5
Ca_01052_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 8.2e-13 76.6 47 72.3
Glyma.15G006900 Glycine max HOM05D000367 ORTHO05D001438 8.2e-13 76.6 47 74.5
Manes.11G058000 Manihot esculenta HOM05D000367 ORTHO05D001438 8.2e-13 76.6 47 74.5
GSVIVG01017355001 Vitis vinifera HOM05D000367 ORTHO05D001438 8.2e-13 76.6 47 74.5
CiPaw.01G249000 Carya illinoinensis HOM05D000367 ORTHO05D001438 1.1e-12 76.3 47 72.3
AUR62011510 Chenopodium quinoa HOM05D000367 ORTHO05D001438 1.1e-12 76.3 47 70.2
COL.COLO4_11930 Corchorus olitorius HOM05D000367 ORTHO05D001438 1.1e-12 76.3 47 74.5
TAR625G0785 Trochodendron aralioides HOM05D000367 ORTHO05D001438 1.1e-12 76.3 47 74.5
Zm00001eb192080 Zea mays HOM05D000367 ORTHO05D001438 1.1e-12 76.3 47 76.6
MSTRG.9421 Avicennia marina HOM05D000367 ORTHO05D001438 1.4e-12 75.9 48 75.0
ClCG07G012190 Citrullus lanatus HOM05D000367 ORTHO05D001438 1.4e-12 75.9 47 72.3
MELO3C017839.2 Cucumis melo HOM05D000367 ORTHO05D001438 1.4e-12 75.9 47 72.3
Potri.003G031800 Populus trichocarpa HOM05D000367 ORTHO05D001438 1.4e-12 75.9 47 72.3
Thecc.06G029100 Theobroma cacao HOM05D000367 ORTHO05D001438 1.4e-12 75.9 47 72.3
Cpa.g.sc67.41 Carica papaya HOM05D000367 ORTHO05D001438 1.8e-12 75.5 47 74.5
CDE01G0238 Ceratophyllum demersum HOM05D000367 ORTHO05D001438 1.8e-12 75.5 47 72.3
Sed0010779 Sechium edule HOM05D000367 ORTHO05D001438 1.8e-12 75.5 47 72.3
SGA_v2.0_scaffold26G11345 Striga asiatica HOM05D000367 ORTHO05D001438 1.8e-12 75.5 48 72.9
Ciclev10025441m.g Citrus clementina HOM05D000367 ORTHO05D001438 2.4e-12 75.1 47 72.3
CsaV3_4G001970 Cucumis sativus L. HOM05D000367 ORTHO05D001438 2.4e-12 75.1 47 72.3
Prupe.3G088900 Prunus persica HOM05D000367 ORTHO05D001438 3.1e-12 74.7 47 74.5
ATR1134G116 Amborella trichopoda HOM05D000367 ORTHO05D001438 4.1e-12 74.3 47 72.3
TWI75G0679 Tripterygium wilfordii HOM05D000367 ORTHO05D001438 4.1e-12 74.3 47 70.2
Medtr2g104030 Medicago truncatula HOM05D000367 ORTHO05D001438 5.3e-12 73.9 47 72.3
Gohir.A06G113200 Gossypium hirsutum HOM05D000367 ORTHO05D001438 7.0e-12 73.6 47 72.3
unitig_60.g25609 Utricularia gibba HOM05D000367 ORTHO05D001438 7.0e-12 73.6 48 75.0
AT1G80030 Arabidopsis thaliana HOM05D000367 ORTHO05D001438 9.1e-12 73.2 47 72.3
Carub.0002s2749 Capsella rubella HOM05D000367 ORTHO05D001438 9.1e-12 73.2 47 72.3
Duzib235G0501 Durio zibethinus HOM05D000367 ORTHO05D001438 9.1e-12 73.2 47 70.2
Phvul.005G178800 Phaseolus vulgaris HOM05D000367 ORTHO05D001438 9.1e-12 73.2 48 70.8
Sp5g35800 Schrenkiella parvula HOM05D000367 ORTHO05D001438 9.1e-12 73.2 47 72.3
AagrBONN_evm.TU.Sc2ySwM_228.263 Anthoceros agrestis HOM05D000367 ORTHO05D001438 1.2e-11 72.8 47 72.3
BcaC08g47566 Brassica carinata HOM05D000367 ORTHO05D001438 1.2e-11 72.8 47 70.2
A07p45450 Brassica napus HOM05D000367 ORTHO05D001438 1.2e-11 72.8 47 70.2
BraA07t32049Z Brassica rapa HOM05D000367 ORTHO05D001438 1.2e-11 72.8 47 70.2
THA.LOC104800440 Tarenaya hassleriana HOM05D000367 ORTHO05D001438 1.2e-11 72.8 47 72.3
HPP92_017056 Vanilla planifolia HOM05D000367 ORTHO05D001438 1.2e-11 72.8 47 72.3
AL2G41510 Arabidopsis lyrata HOM05D000367 ORTHO05D001438 2.0e-11 72.0 47 72.3
Thhalv10018440m.g Eutrema salsugineum HOM05D000367 ORTHO05D001438 2.0e-11 72.0 47 70.2
Gohir.D06G120600 Gossypium hirsutum HOM05D000367 ORTHO05D001438 2.0e-11 72.0 47 72.3
Lalb_Chr24g0395461 Lupinus albus HOM05D000367 ORTHO05D001438 2.0e-11 72.0 47 72.3
C06p54280 Brassica napus HOM05D000367 ORTHO05D001438 2.6e-11 71.6 47 68.1
BolC6t40441H Brassica oleracea HOM05D000367 ORTHO05D001438 2.6e-11 71.6 47 68.1
Gorai.010G140900 Gossypium raimondii HOM05D000367 ORTHO05D001438 2.6e-11 71.6 47 72.3
Sabra03G0018100 Salix brachista HOM05D000367 ORTHO05D001438 2.6e-11 71.6 47 70.2
CARHR074450 Cardamine hirsuta HOM05D000367 ORTHO05D001438 3.5e-11 71.2 48 68.8
Psat5g303520 Pisum sativum HOM05D000367 ORTHO05D001438 4.5e-11 70.9 47 68.1
Os02g0804500 Oryza sativa ssp. japonica HOM05D000367 ORTHO05D001438 7.7e-11 70.1 47 74.5
Atru.chr1.2905 Acer truncatum HOM05D000367 ORTHO05D001438 1.3e-10 69.3 47 63.8
TPR.G37168 Trifolium pratense HOM05D000367 ORTHO05D001438 1.3e-10 69.3 47 68.1
Pp3c7_3290 Physcomitrium patens HOM05D000367 ORTHO05D001438 5.0e-10 67.4 48 66.7
SEGI_23212 Sequoiadendron giganteum HOM05D000367 ORTHO05D001438 8.5e-10 66.6 48 62.5
CBR_g23776 Chara braunii HOM05D000367 ORTHO05D001438 3.2e-09 64.7 67 47.8
RcHm_v2.0_Chr2g0134611 Rosa chinensis HOM05D000367 ORTHO05D037473 9.4e-09 63.2 38 78.9
Aa31LG4G310 Aethionema arabicum HOM05D000030 ORTHO05D001438 2.7e-08 61.6 47 66.0
Pp3c18_2150 Physcomitrium patens HOM05D000367 ORTHO05D001438 2.7e-08 61.6 48 58.3
Mapoly0030s0106 Marchantia polymorpha HOM05D000367 ORTHO05D001438 1.0e-07 59.7 48 60.4
Pp3c22_21460 Physcomitrium patens HOM05D000367 ORTHO05D001438 1.4e-07 59.3 47 61.7
Carub.0007s0192 Capsella rubella HOM05D000367 ORTHO05D001438 5.7e-06 53.9 46 56.5


User provided reference genes

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