Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0004150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.5e-59 230.7 113 100.0
Sc13g0007430 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.0e-38 160.6 111 70.3
Sc02g0004970 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.6e-34 148.3 111 66.7
Sc08g0005440 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.4e-33 146.4 106 69.8
Sc07g0004510 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.0e-33 145.2 111 69.4
Sc24g0001190 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.8e-32 140.2 111 62.2
Sc14g0002490 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.3e-31 137.5 106 64.2
Sc06g0004250 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.4e-30 136.3 98 68.4
Sc17g0003520 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.8e-30 136.0 106 63.2
Sc12g0007100 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.4e-30 135.6 111 64.9
Sc05g0005050 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.1e-30 135.2 87 74.7
Sc03g0004300 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.2e-29 133.3 98 68.4
Sc22g0004320 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.5e-29 131.7 99 66.7
Sc13g0008210 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.7e-28 129.4 86 74.4
Sc05g0005690 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.0e-28 127.9 99 64.6
Sc15g0002320 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.5e-27 126.3 95 67.4
Sc01g0006550 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.6e-27 124.4 110 61.8
Sc24g0001130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.6e-26 122.9 98 65.3
Sc17g0003150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.0e-25 120.2 139 51.8
Sc23g0003790 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.0e-25 118.6 98 63.3
Sc01g0005460 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.2e-25 117.9 92 66.3
Sc02g0004980 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.0e-24 115.9 90 63.3
Sc05g0004480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.4e-23 110.9 99 59.6
Sc08g0004760 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.8e-22 109.4 68 73.5
Sc10g0007130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.1e-22 108.2 109 55.0
Sc18g0005300 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.2e-22 107.1 89 64.0
Sc17g0003130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.2e-21 106.7 96 57.3
Sc03g0005210 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.6e-21 106.3 100 55.0
Sc24g0001220 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.5e-21 105.1 97 58.8
Sc20g0002780 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.1e-19 100.1 68 73.5
Sc05g0004430 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.9e-19 99.4 79 65.8
Sc04g0004840 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.3e-19 98.2 89 59.6
Sc02g0004890 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.6e-19 97.8 68 73.5
Sc01g0006390 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.6e-18 96.3 66 65.2
Sc14g0004880 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.1e-18 95.9 68 70.6
Sc22g0004270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.1e-18 95.9 81 60.5
Sc02g0004160 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.6e-18 95.1 65 67.7
Sc21g0003860 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.1e-17 92.0 98 51.0
Sc02g0004810 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.9e-17 90.5 69 63.8
Sc02g0004480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.5e-16 89.7 60 73.3
Sc17g0002860 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.5e-16 89.7 75 58.7
Sc01g0006690 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.8e-16 87.8 67 65.7
Sc10g0007340 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.5e-16 87.4 72 56.9
Sc08g0005480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.9e-15 85.5 53 71.7
Sc02g0005760 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.7e-15 85.1 68 64.7
Sc05g0004680 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.9e-15 84.7 76 56.6
Sc26g0003020 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.4e-15 84.3 68 64.7
Sabra13G0012400 Salix brachista HOM05D020966 ORTHO05D010251 1.4e-14 83.2 80 50.0
Sc07g0005080 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.2e-13 80.1 69 58.0
Sc02g0005270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.6e-13 79.7 68 61.8
Sc17g0003650 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.5e-13 78.6 73 53.4
Sc22g0004420 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.8e-13 77.4 68 58.8
Nitab4.5_0001698g0060 Nicotiana tabacum HOM05D008778 ORTHO05D003639 5.6e-11 71.2 83 42.2
EL10Ac2g03892 Beta vulgaris HOM05D020966 ORTHO05D023391 1.2e-10 70.1 85 45.9
Peaxi162Scf00820g00117 Petunia axillaris HOM05D008778 ORTHO05D003639 2.8e-10 68.9 81 40.7
AUR62022070 Chenopodium quinoa HOM05D020966 ORTHO05D023391 4.7e-10 68.2 85 45.9
AUR62009156 Chenopodium quinoa HOM05D020966 ORTHO05D023391 6.2e-10 67.8 85 45.9
Peaxi162Scf00820g00119 Petunia axillaris HOM05D008778 ORTHO05D003639 8.1e-10 67.4 83 41.0
Nitab4.5_0006587g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 1.4e-09 66.6 82 40.2
Nitab4.5_0000663g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 3.1e-09 65.5 82 39.0
Nitab4.5_0007634g0020 Nicotiana tabacum HOM05D008778 ORTHO05D003639 3.1e-09 65.5 85 37.6
Sc12g0008150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.0e-09 65.1 55 61.8
Ah.11g044760 Amaranthus hybridus HOM05D020966 ORTHO05D023391 5.2e-09 64.7 84 41.7
Sopen09g003890 Solanum pennellii HOM05D000006 ORTHO05D000001 5.2e-09 64.7 85 36.5
Nitab4.5_0001698g0040 Nicotiana tabacum HOM05D008778 ORTHO05D003639 1.2e-08 63.5 83 38.6
Nitab4.5_0000663g0030 Nicotiana tabacum HOM05D008778 ORTHO05D003639 1.5e-08 63.2 84 38.1
Peaxi162Scf00820g00045 Petunia axillaris HOM05D008778 ORTHO05D003639 4.4e-08 61.6 80 36.2
PGSC0003DMG400002681 Solanum tuberosum HOM05D008778 ORTHO05D003639 5.8e-08 61.2 80 40.0
Nitab4.5_0001698g0030 Nicotiana tabacum HOM05D008778 ORTHO05D003639 7.5e-08 60.8 84 36.9
RcHm_v2.0_Chr2g0121071 Rosa chinensis HOM05D008702 ORTHO05D003639 2.2e-07 59.3 80 38.8
RcHm_v2.0_Chr2g0152981 Rosa chinensis HOM05D008702 ORTHO05D003639 2.2e-07 59.3 80 40.0
RcHm_v2.0_Chr5g0004321 Rosa chinensis HOM05D008702 ORTHO05D003639 2.2e-07 59.3 80 36.2
RcHm_v2.0_Chr2g0116581 Rosa chinensis HOM05D008702 ORTHO05D003639 2.9e-07 58.9 80 38.8
RcHm_v2.0_Chr2g0142701 Rosa chinensis HOM05D008702 ORTHO05D003639 2.9e-07 58.9 80 38.8
RcHm_v2.0_Chr6g0249161 Rosa chinensis HOM05D008702 ORTHO05D003639 2.9e-07 58.9 80 38.8
RcHm_v2.0_Chr2g0138191 Rosa chinensis HOM05D008702 ORTHO05D003639 4.9e-07 58.2 80 38.8
Sc05g0004290 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.9e-07 58.2 58 53.4
Sc11g0004270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.4e-07 57.8 74 43.2
Sopen09g003880 Solanum pennellii HOM05D008778 ORTHO05D003639 1.9e-06 56.2 80 36.2
Sc01g0005490 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.2e-06 55.5 46 54.3


User provided reference genes

Program Settings