Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 6.4e-238 827.0 414 100.0
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 2.1e-172 609.4 413 74.1
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 3.0e-171 605.5 414 76.6
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 6.3e-169 597.8 371 79.5
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 4.1e-168 595.1 411 72.3
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 1.5e-167 593.2 424 73.1
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 2.0e-167 592.8 415 74.2
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 7.7e-167 590.9 430 71.9
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 1.9e-165 586.3 404 72.3
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 3.2e-165 585.5 361 79.2
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 5.5e-165 584.7 387 74.7
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 2.7e-164 582.4 393 75.3
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 3.6e-164 582.0 401 72.1
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 3.6e-164 582.0 384 76.3
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 4.7e-164 581.6 385 74.8
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 1.0e-163 580.5 392 73.7
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.0e-163 580.5 392 73.7
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 1.4e-163 580.1 377 76.9
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 3.9e-163 578.6 394 74.6
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 3.9e-163 578.6 398 73.4
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 5.1e-163 578.2 384 74.5
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 1.5e-162 576.6 392 73.5
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 2.6e-162 575.9 366 78.1
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 2.6e-162 575.9 384 74.5
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 2.6e-162 575.9 372 76.6
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 9.7e-162 573.9 366 77.6
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.7e-161 573.2 400 72.0
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 2.2e-161 572.8 386 74.6
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 2.8e-161 572.4 399 73.4
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 3.7e-161 572.0 406 72.4
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 6.3e-161 571.2 386 74.1
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.4e-160 570.1 360 77.5
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 2.6e-159 565.8 403 71.7
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 5.0e-158 561.6 371 74.9
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 6.5e-158 561.2 396 72.2
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 1.1e-157 560.5 409 69.2
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 1.5e-157 560.1 377 74.5
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 3.2e-157 558.9 381 73.2
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 5.5e-157 558.1 360 76.4
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 2.1e-156 556.2 353 76.8
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 2.7e-156 555.8 376 73.4
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 4.7e-156 555.1 367 75.7
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 4.7e-156 555.1 353 77.3
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 6.1e-156 554.7 360 77.2
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 3.0e-155 552.4 389 72.8
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 1.1e-154 550.4 395 71.9
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 2.0e-154 549.7 395 71.9
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 5.7e-154 548.1 399 69.7
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 9.7e-154 547.4 367 74.7
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 2.8e-153 545.8 386 71.2
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 4.8e-153 545.0 392 70.4
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 8.2e-153 544.3 374 71.9
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 1.8e-152 543.1 371 73.6
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 5.3e-152 541.6 353 76.5
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 3.5e-151 538.9 372 72.8
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 2.2e-150 536.2 349 76.2
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 3.8e-150 535.4 394 66.5
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 6.5e-150 534.6 405 68.9
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 8.5e-150 534.3 349 74.5
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 1.1e-149 533.9 381 72.7
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 1.5e-149 533.5 425 66.4
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 5.7e-146 521.5 366 70.2
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 7.5e-146 521.2 400 68.5
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 2.2e-145 519.6 352 74.1
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 8.5e-142 507.7 367 71.1
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 8.5e-142 507.7 341 74.2
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 1.8e-139 500.0 394 67.0
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 1.1e-136 490.7 356 66.6
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 7.7e-135 484.6 357 66.1
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 3.8e-134 482.3 373 65.7
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 3.8e-134 482.3 373 65.7
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 2.5e-133 479.6 399 63.9
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 3.4e-130 469.2 393 63.9
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 2.4e-128 463.0 300 78.3
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 3.5e-127 459.1 382 64.4
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 2.0e-119 433.3 349 63.3
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.9e-109 400.2 373 57.1
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 4.7e-108 395.6 260 75.0
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 2.3e-107 393.3 278 71.9
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 5.8e-106 388.7 238 79.4
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 3.4e-98 362.8 318 64.2
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 1.2e-90 337.8 275 62.2
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 6.4e-89 332.0 253 68.4
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 1.5e-82 310.8 232 65.9
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 1.3e-78 297.7 352 46.6
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 1.6e-76 290.8 174 79.3
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 1.6e-63 247.7 197 64.0
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 3.1e-59 233.4 145 80.0
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 3.7e-44 183.3 129 67.4
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 1.1e-43 181.8 122 69.7
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 1.6e-07 61.6 73 49.3


User provided reference genes

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