Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0003920 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.0e-87 323.9 165 100.0
Sc05g0004710 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.1e-27 124.4 238 38.7
Sc07g0004870 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.2e-23 112.1 66 80.3
Sc02g0004860 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.9e-20 103.2 66 71.2
Sc12g0008170 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.3e-20 102.1 148 42.6
Sc03g0005210 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.4e-18 96.3 66 66.7
Sc03g0004870 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.2e-15 85.9 56 67.9
Sc05g0004290 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.2e-15 85.5 64 60.9
Sc22g0004270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.5e-15 85.1 64 62.5
Sc02g0004480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.3e-15 84.3 47 78.7
Sc10g0007100 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.9e-14 81.3 66 62.1
Sc18g0005300 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.0e-13 79.3 79 53.2
Sc02g0004890 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.6e-12 74.3 40 87.5
Sc05g0005690 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.2e-11 71.6 51 70.6
Sc11g0004270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.1e-11 71.2 83 50.6
Sc05g0003960 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.8e-10 70.1 60 58.3
Sc24g0001210 Simmondsia chinensis HOM05D007912 ORTHO05D388170 3.1e-10 69.3 51 68.6
Sc09g0007100 Simmondsia chinensis HOM05D007912 ORTHO05D387863 9.0e-10 67.8 118 39.0
Sc06g0004280 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.4e-09 65.9 56 60.7
Sc17g0003520 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.4e-09 65.9 47 70.2
Sc02g0004930 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.8e-09 65.1 40 77.5
Sc01g0005460 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.4e-08 61.2 54 59.3
RcHm_v2.0_Chr6g0291271 Rosa chinensis HOM05D009149 ORTHO05D003639 7.1e-07 58.2 63 46.0
Sc25g0003180 Simmondsia chinensis HOM05D007912 ORTHO05D388712 9.3e-07 57.8 46 67.4
RcHm_v2.0_Chr2g0131351 Rosa chinensis HOM05D009149 ORTHO05D003639 1.6e-06 57.0 69 40.6
RcHm_v2.0_Chr3g0493631 Rosa chinensis HOM05D009149 ORTHO05D003639 2.1e-06 56.6 58 43.1
Sc02g0004790 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.1e-06 56.6 40 62.5
RcHm_v2.0_Chr1g0350201 Rosa chinensis HOM05D009149 ORTHO05D003639 2.7e-06 56.2 58 44.8
RcHm_v2.0_Chr2g0105541 Rosa chinensis HOM05D009149 ORTHO05D003639 2.7e-06 56.2 58 44.8
RcHm_v2.0_Chr7g0194611 Rosa chinensis HOM05D009149 ORTHO05D003639 2.7e-06 56.2 55 41.8
Sc04g0004730 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.0e-06 55.1 34 73.5


User provided reference genes

Program Settings