Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 1.3e-166 589.7 305 100.0
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 1.1e-66 257.7 200 66.0
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 6.9e-64 248.4 211 62.6
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 1.3e-62 244.2 235 58.3
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 2.9e-62 243.0 235 57.9
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 1.6e-60 237.3 225 57.3
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 1.3e-59 234.2 239 54.4
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 1.5e-58 230.7 231 55.0
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 1.5e-58 230.7 233 55.4
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 1.1e-56 224.6 230 54.8
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 2.4e-56 223.4 225 54.7
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 2.4e-56 223.4 225 56.0
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 3.1e-56 223.0 235 52.8
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 4.0e-56 222.6 230 55.7
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 5.3e-56 222.2 235 52.8
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 9.0e-56 221.5 235 52.3
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 1.5e-55 220.7 225 53.8
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 1.5e-55 220.7 201 61.2
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 2.0e-55 220.3 232 53.4
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 2.6e-55 219.9 236 53.0
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 3.4e-55 219.5 211 55.0
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 4.5e-55 219.2 242 52.5
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 5.8e-55 218.8 240 52.5
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 7.6e-55 218.4 185 61.1
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 1.7e-54 217.2 239 50.6
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 2.2e-54 216.9 209 56.0
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 2.2e-54 216.9 230 51.7
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 2.5e-53 213.4 207 55.6
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 3.2e-53 213.0 210 55.7
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.2e-52 211.1 210 55.2
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 1.2e-52 211.1 215 53.0
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 2.1e-52 210.3 210 56.2
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 4.6e-52 209.1 235 51.9
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 6.0e-52 208.8 236 50.4
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 6.0e-52 208.8 236 50.4
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 6.0e-52 208.8 232 50.9
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 7.9e-52 208.4 225 50.7
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.3e-51 207.6 210 55.2
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 1.3e-51 207.6 233 49.4
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 3.9e-51 206.1 210 53.3
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 3.9e-51 206.1 220 52.3
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 8.7e-51 204.9 230 52.2
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 8.7e-51 204.9 239 52.7
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 1.5e-50 204.1 237 48.5
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 1.9e-50 203.8 254 47.2
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 2.5e-50 203.4 225 52.0
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 3.3e-50 203.0 220 50.9
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 3.3e-50 203.0 214 50.9
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 3.3e-50 203.0 240 51.7
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 4.3e-50 202.6 247 46.2
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 4.3e-50 202.6 223 52.5
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 5.7e-50 202.2 208 54.3
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 1.3e-49 201.1 242 47.5
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 1.6e-49 200.7 240 50.4
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 4.8e-49 199.1 233 51.5
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 4.8e-49 199.1 203 55.2
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 4.8e-49 199.1 219 51.1
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 6.3e-49 198.7 244 49.2
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 8.2e-49 198.4 219 53.9
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 8.2e-49 198.4 214 54.7
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 8.2e-49 198.4 229 49.8
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 1.4e-48 197.6 217 52.1
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 3.1e-48 196.4 235 51.1
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 4.1e-48 196.1 236 50.4
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 4.1e-48 196.1 223 52.0
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 1.2e-47 194.5 231 53.2
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 1.5e-47 194.1 231 51.1
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 1.5e-47 194.1 225 52.0
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 1.5e-47 194.1 219 52.1
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 2.0e-47 193.7 319 41.1
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 1.0e-46 191.4 210 51.4
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 1.3e-46 191.0 214 50.5
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 2.2e-46 190.3 237 46.8
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 3.8e-46 189.5 217 50.2
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 3.8e-46 189.5 229 51.5
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 8.5e-46 188.3 211 48.8
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 8.5e-46 188.3 229 51.1
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 1.1e-45 188.0 234 51.3
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 3.2e-45 186.4 234 49.6
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 1.2e-44 184.5 219 51.1
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 2.1e-44 183.7 255 43.5
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 2.7e-44 183.3 230 50.0
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 2.7e-44 183.3 210 51.0
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 3.0e-43 179.9 227 49.3
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 3.9e-43 179.5 215 47.9
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 8.7e-43 178.3 210 50.0
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 2.2e-41 173.7 236 44.9
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 1.5e-39 167.5 202 49.5
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 1.4e-37 161.0 237 44.3
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 4.2e-37 159.5 210 44.8
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 3.0e-35 153.3 273 40.3
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 6.9e-32 142.1 216 41.2
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 2.0e-31 140.6 174 48.3
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 5.9e-31 139.0 135 57.0
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 8.5e-30 135.2 272 33.8
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 1.4e-29 134.4 154 51.9
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 4.4e-26 122.9 261 32.6
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 7.7e-23 112.1 234 35.0
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 2.9e-22 110.2 140 47.1
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 3.2e-21 106.7 165 44.2
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 2.7e-20 103.6 118 51.7
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 2.6e-18 97.1 68 67.6
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 2.6e-18 97.1 81 61.7
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 3.3e-18 96.7 268 26.9
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 7.5e-18 95.5 255 27.1
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 8.2e-17 92.0 69 68.1
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 9.4e-13 78.6 38 86.8
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 1.6e-12 77.8 52 67.3
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 2.7e-12 77.0 158 39.9
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 1.0e-11 75.1 40 80.0
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 1.2e-10 71.6 49 71.4
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 4.4e-10 69.7 64 46.9
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 9.8e-10 68.6 42 69.0
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 8.3e-09 65.5 57 50.9
QL03p040408 Quercus lobata HOM05D006361 ORTHO05D007824 1.3e-06 58.2 45 57.8


User provided reference genes

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