Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0003440 Simmondsia chinensis HOM05D007757 ORTHO05D009619 3.6e-67 258.1 125 100.0
PGSC0003DMG400014580 Solanum tuberosum HOM05D007757 ORTHO05D009619 4.0e-10 68.6 58 48.3
AUR62035218 Chenopodium quinoa HOM05D007757 ORTHO05D009619 5.2e-10 68.2 55 58.2
Peaxi162Scf00382g00073 Petunia axillaris HOM05D007757 ORTHO05D009619 8.9e-10 67.4 106 41.5
MSTRG.2233 Avicennia marina HOM05D007757 ORTHO05D009619 1.2e-09 67.0 106 37.7
COL.COLO4_37757 Corchorus olitorius HOM05D007757 ORTHO05D009619 1.2e-09 67.0 93 40.9
Rhsim09G0107900 Rhododendron simsii HOM05D007757 ORTHO05D009619 1.2e-09 67.0 103 43.7
CAN.G610.82 Capsicum annuum HOM05D007757 ORTHO05D009619 4.4e-09 65.1 57 50.9
Nitab4.5_0000791g0090 Nicotiana tabacum HOM05D007757 ORTHO05D009619 5.8e-09 64.7 57 50.9
CiPaw.15G085600 Carya illinoinensis HOM05D007757 ORTHO05D009619 7.5e-09 64.3 110 38.2
Haze_17487 Corylus avellana HOM05D007757 ORTHO05D009619 7.5e-09 64.3 115 36.5
Actinidia16654 Actinidia chinensis HOM05D007757 ORTHO05D009619 1.3e-08 63.5 55 52.7
Gohir.D01G175600 Gossypium hirsutum HOM05D007757 ORTHO05D009619 1.7e-08 63.2 54 46.3
Gorai.002G217900 Gossypium raimondii HOM05D007757 ORTHO05D009619 1.7e-08 63.2 54 46.3
Peaxi162Scf00382g00086 Petunia axillaris HOM05D007757 ORTHO05D009619 1.7e-08 63.2 111 36.0
DCAR_030156 Daucus carota HOM05D007757 ORTHO05D009619 2.2e-08 62.8 48 58.3
Manes.06G067700 Manihot esculenta HOM05D007757 ORTHO05D009619 2.2e-08 62.8 54 51.9
TPR.G1503 Trifolium pratense HOM05D007757 ORTHO05D009619 2.2e-08 62.8 68 47.1
Actinidia14892 Actinidia chinensis HOM05D007757 ORTHO05D009619 2.9e-08 62.4 89 40.4
Sopen05g005100 Solanum pennellii HOM05D007757 ORTHO05D009619 2.9e-08 62.4 114 38.6
Gorai.012G123000 Gossypium raimondii HOM05D007757 ORTHO05D009619 3.7e-08 62.0 61 47.5
Glyma.20G115900 Glycine max HOM05D007757 ORTHO05D009619 4.9e-08 61.6 55 50.9
Migut.E00343 Erythranthe guttata HOM05D007757 ORTHO05D009619 6.4e-08 61.2 69 42.0
MD13G1041700 Malus domestica HOM05D007757 ORTHO05D009619 6.4e-08 61.2 120 32.5
Psat6g227960 Pisum sativum HOM05D007757 ORTHO05D009619 6.4e-08 61.2 49 53.1
Ah.02g127930 Amaranthus hybridus HOM05D007757 ORTHO05D009619 8.3e-08 60.8 54 53.7
Duzib248G1397 Durio zibethinus HOM05D007757 ORTHO05D009619 8.3e-08 60.8 119 34.5
Glyma.10G274100 Glycine max HOM05D007757 ORTHO05D009619 8.3e-08 60.8 57 49.1
TWI75G0183 Tripterygium wilfordii HOM05D007757 ORTHO05D009619 8.3e-08 60.8 103 35.9
Cc11_g10120 Coffea canephora HOM05D007757 ORTHO05D009619 1.1e-07 60.5 103 37.9
Gohir.D04G138100 Gossypium hirsutum HOM05D007757 ORTHO05D009619 1.1e-07 60.5 106 38.7
Medtr1g110790 Medicago truncatula HOM05D007757 ORTHO05D009619 1.1e-07 60.5 60 48.3
THA.LOC104800008 Tarenaya hassleriana HOM05D007757 ORTHO05D009619 1.1e-07 60.5 50 48.0
Solyc05g009340.1 Solanum lycopersicum HOM05D007757 ORTHO05D009619 3.2e-07 58.9 114 37.7
Ciclev10017153m.g Citrus clementina HOM05D007757 ORTHO05D009619 4.1e-07 58.5 104 35.6
Potri.010G124700 Populus trichocarpa HOM05D007757 ORTHO05D009619 4.1e-07 58.5 108 36.1
THA.LOC104821934 Tarenaya hassleriana HOM05D007757 ORTHO05D009619 4.1e-07 58.5 50 46.0
CANSAT01G0578 Cannabis sativa HOM05D007757 ORTHO05D009619 1.2e-06 57.0 76 43.4
Lalb_Chr02g0145961 Lupinus albus HOM05D007757 ORTHO05D009619 1.2e-06 57.0 103 39.8
Prupe.1G311500 Prunus persica HOM05D007757 ORTHO05D009619 1.2e-06 57.0 125 33.6
Thecc.02G230200 Theobroma cacao HOM05D007757 ORTHO05D009619 1.6e-06 56.6 119 33.6
Phvul.007G027400 Phaseolus vulgaris HOM05D007757 ORTHO05D009619 2.1e-06 56.2 58 46.6
VMungo0720G1194 Vigna mungo HOM05D007757 ORTHO05D009619 2.1e-06 56.2 58 46.6
EL10Ac6g14396 Beta vulgaris HOM05D007757 ORTHO05D009619 2.7e-06 55.8 54 48.1
SGA_v2.0_scaffold36G14535 Striga asiatica HOM05D007757 ORTHO05D009619 3.5e-06 55.5 55 38.2
Cpa.g.sc1.36 Carica papaya HOM05D007757 ORTHO05D009619 4.6e-06 55.1 90 38.9
Ca_11172_v3 Cicer arietinum L. HOM05D007757 ORTHO05D009619 4.6e-06 55.1 106 35.8
Lalb_Chr06g0166051 Lupinus albus HOM05D007757 ORTHO05D009619 4.6e-06 55.1 52 51.9


User provided reference genes

Program Settings