Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0003420 Simmondsia chinensis HOM05D008112 ORTHO05D010225 5.3e-49 197.6 115 100.0
Hma1.2p1_0061F.1_g033900 Hydrangea macrophylla HOM05D008112 ORTHO05D010225 1.1e-09 67.0 120 36.7
Glyma.08G262400 Glycine max HOM05D008112 ORTHO05D010225 2.0e-08 62.8 105 35.2
Manes.06G068400 Manihot esculenta HOM05D008112 ORTHO05D010225 3.4e-08 62.0 116 35.3
Gohir.D02G169900 Gossypium hirsutum HOM05D008112 ORTHO05D010225 1.7e-07 59.7 103 32.0
Gorai.005G190400 Gossypium raimondii HOM05D008112 ORTHO05D010225 1.7e-07 59.7 103 32.0
Rhsim12G0084800 Rhododendron simsii HOM05D008112 ORTHO05D010225 1.7e-07 59.7 123 34.1
Medtr1g110820 Medicago truncatula HOM05D008112 ORTHO05D010225 2.2e-07 59.3 105 33.3
Gohir.A03G146800 Gossypium hirsutum HOM05D008112 ORTHO05D010225 3.8e-07 58.5 103 32.0
CiPaw.15G085200 Carya illinoinensis HOM05D008112 ORTHO05D010225 1.1e-06 57.0 119 32.8
Nn3g17844 Nelumbo nucifera HOM05D008112 ORTHO05D010225 1.1e-06 57.0 115 33.0
Prupe.1G311100 Prunus persica HOM05D008112 ORTHO05D010225 1.1e-06 57.0 102 35.3
SGA_v2.0_scaffold124G33520 Striga asiatica HOM05D008112 ORTHO05D010225 4.2e-06 55.1 109 36.7
CSS0024667 Camellia sinensis var. sinensis HOM05D008112 ORTHO05D010225 9.4e-06 53.9 105 34.3


User provided reference genes

Program Settings