Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0002970 Simmondsia chinensis HOM05D002617 ORTHO05D006076 5.6e-278 960.3 481 100.0
Hund05776 Selenicereus undatus HOM05D002617 ORTHO05D006076 7.7e-110 401.7 441 51.0
EL10Ac6g14526 Beta vulgaris HOM05D002617 ORTHO05D006076 1.7e-104 384.0 470 48.5
AUR62007748 Chenopodium quinoa HOM05D002617 ORTHO05D006076 7.0e-103 378.6 474 45.8
TAR371G0417 Trochodendron aralioides HOM05D002617 ORTHO05D006076 1.5e-102 377.5 448 49.3
TAR629G1560 Trochodendron aralioides HOM05D002617 ORTHO05D006076 4.5e-102 375.9 485 47.6
AUR62002941 Chenopodium quinoa HOM05D002617 ORTHO05D006076 5.5e-100 369.0 471 45.4
Cc07_g05010 Coffea canephora HOM05D002617 ORTHO05D006076 2.0e-97 360.5 418 47.8
Actinidia10244 Actinidia chinensis HOM05D002617 ORTHO05D006076 5.3e-95 352.4 487 43.3
Ah.03g138020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 5.9e-94 349.0 442 45.7
Dinv34860 Davidia involucrata HOM05D002617 ORTHO05D006076 7.7e-94 348.6 453 45.5
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 6.5e-93 345.5 465 45.8
CiPaw.03G005500 Carya illinoinensis HOM05D002617 ORTHO05D006076 5.5e-92 342.4 450 44.9
Sopen03g009500 Solanum pennellii HOM05D002617 ORTHO05D000002 7.2e-92 342.0 430 44.9
Peaxi162Scf00479g00121 Petunia axillaris HOM05D002617 ORTHO05D006076 9.4e-92 341.7 445 45.2
CAN.G153.18 Capsicum annuum HOM05D002617 ORTHO05D006076 1.2e-91 341.3 403 47.4
Nitab4.5_0003461g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 1.2e-91 341.3 404 46.8
Solyc03g045060.3 Solanum lycopersicum HOM05D002617 ORTHO05D006076 2.7e-91 340.1 446 43.7
CANSAT64G0391 Cannabis sativa HOM05D002617 ORTHO05D006076 4.7e-91 339.3 379 48.5
QL02p053118 Quercus lobata HOM05D002617 ORTHO05D006076 4.7e-91 339.3 406 47.0
DCAR_026269 Daucus carota HOM05D002617 ORTHO05D006076 6.1e-91 339.0 401 48.1
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 1.4e-90 337.8 458 44.5
Lj4A130T19 Lonicera japonica HOM05D002617 ORTHO05D006076 1.8e-90 337.4 425 46.1
Hma1.2p1_0136F.1_g062020 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 2.3e-90 337.0 354 50.0
Hma1.2p1_0550F.1_g177160 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 4.0e-90 336.3 358 49.4
MSTRG.23826 Avicennia marina HOM05D002617 ORTHO05D006076 5.2e-90 335.9 391 48.3
HanXRQChr15g0489371 Helianthus annuus HOM05D002617 ORTHO05D006076 9.8e-89 331.6 340 50.6
MD09G1082600 Malus domestica HOM05D002617 ORTHO05D006076 2.8e-88 330.1 433 43.4
Manes.02G066000 Manihot esculenta HOM05D002617 ORTHO05D006076 2.8e-88 330.1 410 48.0
Ca_26958_v3 Cicer arietinum L. HOM05D002617 ORTHO05D006076 3.7e-88 329.7 361 47.9
Rhsim07G0215800 Rhododendron simsii HOM05D002617 ORTHO05D006076 1.1e-87 328.2 456 43.2
HanXRQChr14g0439661 Helianthus annuus HOM05D002617 ORTHO05D006076 1.4e-87 327.8 347 50.1
MD17G1073100 Malus domestica HOM05D002617 ORTHO05D006076 1.4e-87 327.8 421 43.2
GSVIVG01011977001 Vitis vinifera HOM05D002617 ORTHO05D006076 1.4e-87 327.8 365 48.5
Glyma.13G047700 Glycine max HOM05D002617 ORTHO05D006076 1.8e-87 327.4 363 46.8
Actinidia19593 Actinidia chinensis HOM05D002617 ORTHO05D006076 4.1e-87 326.2 383 48.3
Lj2g0025982 Lotus japonicus HOM05D002617 ORTHO05D006076 5.4e-87 325.9 379 46.2
Prupe.3G241000 Prunus persica HOM05D002617 ORTHO05D006076 5.4e-87 325.9 487 40.5
Sabra04G0077200 Salix brachista HOM05D002617 ORTHO05D006076 7.0e-87 325.5 439 44.4
TWI74G0354 Tripterygium wilfordii HOM05D002617 ORTHO05D006076 7.0e-87 325.5 405 44.9
Oeu032874.2 Olea europaea HOM05D002617 ORTHO05D006076 9.1e-87 325.1 433 43.2
Atru.chr8.797 Acer truncatum HOM05D002617 ORTHO05D006076 5.9e-86 322.4 453 43.5
Potri.004G104400 Populus trichocarpa HOM05D002617 ORTHO05D006076 5.9e-86 322.4 420 45.5
Cpa.g.sc179.38 Carica papaya HOM05D002617 ORTHO05D006076 3.8e-85 319.7 454 43.4
RcHm_v2.0_Chr2g0163421 Rosa chinensis HOM05D002617 ORTHO05D006076 6.5e-85 318.9 504 41.1
Potri.017G111300 Populus trichocarpa HOM05D002617 ORTHO05D006076 8.5e-85 318.5 370 48.6
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 1.1e-84 318.2 411 45.3
VMungo0540G1549 Vigna mungo HOM05D002617 ORTHO05D006076 1.1e-84 318.2 425 42.8
Nitab4.5_0004487g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 1.9e-84 317.4 405 45.2
ClCG11G005280 Citrullus lanatus HOM05D002617 ORTHO05D006076 2.5e-84 317.0 385 47.3
Psat0s1160g0440 Pisum sativum HOM05D002617 ORTHO05D006076 3.2e-84 316.6 414 44.4
ATR0598G067 Amborella trichopoda HOM05D002617 ORTHO05D006076 5.5e-84 315.8 403 45.7
MELO3C022066.2 Cucumis melo HOM05D002617 ORTHO05D006076 9.4e-84 315.1 407 45.2
Sc12g0007600 Simmondsia chinensis HOM05D002617 ORTHO05D006076 9.4e-84 315.1 390 46.2
Aqoxy3G00424 Aquilegia oxysepala HOM05D002617 ORTHO05D006076 2.1e-83 313.9 328 50.0
CsaV3_5G039050 Cucumis sativus L. HOM05D002617 ORTHO05D006076 3.6e-83 313.2 407 45.0
Lalb_Chr02g0158361 Lupinus albus HOM05D002617 ORTHO05D006076 3.6e-83 313.2 389 43.2
Medtr6g016990 Medicago truncatula HOM05D002617 ORTHO05D006076 3.6e-83 313.2 437 41.9
ECA232G1923 Erigeron canadensis HOM05D002617 ORTHO05D006076 4.7e-83 312.8 348 49.4
PSO017G2525 Papaver somniferum HOM05D002617 ORTHO05D006076 4.7e-83 312.8 356 50.0
PSO478G3319 Papaver somniferum HOM05D002617 ORTHO05D006076 4.7e-83 312.8 357 49.9
Duzib235G0774 Durio zibethinus HOM05D002617 ORTHO05D006076 6.1e-83 312.4 307 53.1
arahy.Tifrunner.gnm1.ann1.B4TVCG Arachis hypogaea HOM05D002617 ORTHO05D006076 1.4e-82 311.2 350 47.4
PGR042G0381 Punica granatum HOM05D002617 ORTHO05D006076 1.4e-82 311.2 380 47.1
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 2.3e-82 310.5 510 39.0
FAN14G4630 Fragaria x ananassa HOM05D002617 ORTHO05D006076 2.3e-82 310.5 365 47.4
Thecc.04G140400 Theobroma cacao HOM05D002617 ORTHO05D006076 2.3e-82 310.5 315 51.7
TPR.G9686 Trifolium pratense HOM05D002617 ORTHO05D006076 2.3e-82 310.5 312 51.6
Gohir.A13G161700 Gossypium hirsutum HOM05D002617 ORTHO05D006076 5.2e-82 309.3 312 51.6
Phvul.L003037 Phaseolus vulgaris HOM05D002617 ORTHO05D006076 8.8e-82 308.5 369 45.0
arahy.Tifrunner.gnm1.ann1.LH188B Arachis hypogaea HOM05D002617 ORTHO05D006076 1.5e-81 307.8 350 47.4
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 9.8e-81 305.1 446 42.2
FvH4_6g45480 Fragaria vesca HOM05D002617 ORTHO05D006076 9.8e-81 305.1 374 46.3
Duzib177G0627 Durio zibethinus HOM05D002617 ORTHO05D006076 1.3e-80 304.7 386 46.1
Lalb_Chr21g0317971 Lupinus albus HOM05D002617 ORTHO05D006076 2.2e-80 303.9 338 47.6
Eucgr.J01460 Eucalyptus grandis HOM05D002617 ORTHO05D006076 2.8e-80 303.5 444 41.2
Gohir.D13G172300 Gossypium hirsutum HOM05D002617 ORTHO05D006076 6.3e-80 302.4 361 46.8
Gorai.013G188400 Gossypium raimondii HOM05D002617 ORTHO05D006076 6.3e-80 302.4 361 46.8
Aa31LG9G16990 Aethionema arabicum HOM05D002617 ORTHO05D006076 8.3e-80 302.0 356 46.9
COL.COLO4_16207 Corchorus olitorius HOM05D002617 ORTHO05D006076 8.3e-80 302.0 464 40.9
EL10Ac5g11460 Beta vulgaris HOM05D002617 ORTHO05D006076 1.8e-79 300.8 300 50.3
Sabra17G0092600 Salix brachista HOM05D002617 ORTHO05D006076 1.8e-79 300.8 372 45.4
Sed0011770 Sechium edule HOM05D002617 ORTHO05D006076 2.4e-79 300.4 464 40.9
Lsat_1_v5_gn_4_175880 Lactuca sativa HOM05D002617 ORTHO05D006076 5.4e-79 299.3 347 45.8
Zm00001eb182330 Zea mays HOM05D002617 ORTHO05D006076 5.4e-79 299.3 476 40.8
Thhalv10027714m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 4.5e-78 296.2 373 45.8
DCAR_026709 Daucus carota HOM05D002617 ORTHO05D006076 1.3e-77 294.7 352 47.7
unitig_736.g22255 Utricularia gibba HOM05D002617 ORTHO05D006076 1.3e-77 294.7 373 44.5
AL2G25720 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 2.9e-77 293.5 320 48.4
Carub.0007s3725 Capsella rubella HOM05D002617 ORTHO05D006076 3.8e-77 293.1 347 45.5
AUR62025837 Chenopodium quinoa HOM05D002617 ORTHO05D006076 5.0e-77 292.7 306 49.0
AUR62029876 Chenopodium quinoa HOM05D002617 ORTHO05D006076 5.0e-77 292.7 291 51.5
THA.LOC104805556 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 1.1e-76 291.6 367 45.2
SGA_v2.0_scaffold204G41654 Striga asiatica HOM05D002617 ORTHO05D006076 1.5e-76 291.2 410 44.1
Carub.0002s1348 Capsella rubella HOM05D002617 ORTHO05D006076 3.3e-76 290.0 383 44.1
Glyma.19G040800 Glycine max HOM05D002617 ORTHO05D006076 7.2e-76 288.9 356 44.9
AT1G67210 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 9.5e-76 288.5 318 46.9
HPP92_011591 Vanilla planifolia HOM05D002617 ORTHO05D006076 9.5e-76 288.5 388 43.6
Os06g0495700 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D006076 1.6e-75 287.7 355 46.5
BcaC08g44397 Brassica carinata HOM05D002617 ORTHO05D006076 3.6e-75 286.6 369 44.7
THA.LOC104822697 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 3.6e-75 286.6 353 46.7
AT5G38600 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 6.1e-75 285.8 326 46.6
BolC6t37041H Brassica oleracea HOM05D002617 ORTHO05D006076 1.0e-74 285.0 363 44.9
C06p18260 Brassica napus HOM05D000054 ORTHO05D006076 1.4e-74 284.6 363 44.6
FAN02G4200 Fragaria x ananassa HOM05D002617 ORTHO05D006076 1.8e-74 284.3 511 37.0
CARHR059670 Cardamine hirsuta HOM05D002617 ORTHO05D006076 2.3e-74 283.9 411 41.4
Sp7g03340 Schrenkiella parvula HOM05D002617 ORTHO05D006076 2.3e-74 283.9 360 44.7
BcaB02g08001 Brassica carinata HOM05D002617 ORTHO05D006076 4.0e-74 283.1 422 41.5
Oeu043861.1 Olea europaea HOM05D002617 ORTHO05D006076 4.0e-74 283.1 312 48.7
A07p19790 Brassica napus HOM05D002617 ORTHO05D006076 5.2e-74 282.7 384 43.5
BraA07t29680Z Brassica rapa HOM05D002617 ORTHO05D006076 5.2e-74 282.7 384 43.5
AL7G51930 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 1.2e-73 281.6 378 43.9
CARHR214050 Cardamine hirsuta HOM05D002617 ORTHO05D006076 5.7e-73 279.3 419 41.5
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 5.7e-73 279.3 337 47.2
Sp5g22140 Schrenkiella parvula HOM05D002617 ORTHO05D006076 7.0e-71 272.3 302 49.3
Lsat_1_v5_gn_8_37540 Lactuca sativa HOM05D002617 ORTHO05D006076 9.2e-71 271.9 287 51.6
BraA02t06470Z Brassica rapa HOM05D002617 ORTHO05D006076 5.0e-69 266.2 457 38.3
A02p14070 Brassica napus HOM05D002617 ORTHO05D006076 8.6e-69 265.4 452 38.5
BcaB05g24247 Brassica carinata HOM05D002617 ORTHO05D006076 1.5e-68 264.6 351 44.7
BcaC03g14816 Brassica carinata HOM05D002617 ORTHO05D006076 1.5e-68 264.6 315 46.0
BolC2t08421H Brassica oleracea HOM05D002617 ORTHO05D006076 1.5e-68 264.6 315 46.0
C02p22680 Brassica napus HOM05D002617 ORTHO05D006076 1.9e-68 264.2 316 45.9
Aa31LG2G3590 Aethionema arabicum HOM05D002617 ORTHO05D006076 7.3e-68 262.3 389 40.1
Thhalv10018682m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 7.5e-65 252.3 267 49.4
FAN05G1346 Fragaria x ananassa HOM05D002617 ORTHO05D006076 1.9e-60 237.7 309 44.0
Mapoly0126s0021 Marchantia polymorpha HOM05D002617 ORTHO05D006076 1.9e-60 237.7 324 42.9
CDE03G0434 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 4.7e-59 233.0 270 46.7
Actinidia29638 Actinidia chinensis HOM05D002617 ORTHO05D006076 8.3e-56 222.2 267 46.1
Actinidia13004 Actinidia chinensis HOM05D002617 ORTHO05D006076 7.1e-55 219.2 208 52.9
SMO005G0008 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 7.8e-54 215.7 336 39.0
FAN09G0965 Fragaria x ananassa HOM05D002617 ORTHO05D006076 1.7e-53 214.5 264 45.5
vmacro04611 Vaccinium macrocarpon HOM05D002617 ORTHO05D006076 2.3e-53 214.2 465 34.0
CSS0005448 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 3.9e-53 213.4 246 49.6
Lj3A1022T61 Lonicera japonica HOM05D002617 ORTHO05D006076 8.6e-53 212.2 154 65.6
CSS0031641 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 1.4e-47 194.9 182 55.5
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 3.9e-45 186.8 237 45.6
SMO197G0066 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 8.6e-45 185.7 343 35.3
CBR_g21963 Chara braunii HOM05D002617 ORTHO05D006076 1.1e-39 168.7 457 30.2
Nn8g40574 Nelumbo nucifera HOM05D002617 ORTHO05D006076 9.3e-31 139.0 210 41.4
AagrBONN_evm.TU.Sc2ySwM_344.4970 Anthoceros agrestis HOM05D002617 ORTHO05D006076 1.0e-29 135.6 196 37.2
SGA_v2.0_scaffold150G36614 Striga asiatica HOM05D002617 ORTHO05D006076 6.2e-27 126.3 364 30.5
Pp3c8_12390 Physcomitrium patens HOM05D002617 ORTHO05D006076 6.9e-26 122.9 357 28.3
Ah.02g115020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 9.3e-23 112.5 296 29.7
Glyma.19G043901 Glycine max HOM05D002617 ORTHO05D006076 1.2e-22 112.1 155 40.0
Dinv33922 Davidia involucrata HOM05D002617 ORTHO05D006076 2.1e-19 101.3 163 41.7
CDE04G2372 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 2.8e-19 100.9 189 33.9
SalBow1G4795 Salvia bowleyana HOM05D002617 ORTHO05D006076 3.7e-19 100.5 149 40.3
CSS0013506 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 5.1e-13 80.1 141 39.0
PGSC0003DMG400003361 Solanum tuberosum HOM05D002617 ORTHO05D006076 9.6e-12 75.9 132 40.2
Lsat_1_v5_gn_8_136421 Lactuca sativa HOM05D002617 ORTHO05D048373 2.7e-06 57.8 53 52.8
Actinidia19277 Actinidia chinensis HOM05D002617 ORTHO05D006076 6.1e-06 56.6 51 49.0


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