Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 2.0e-142 509.2 277 100.0
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 6.9e-71 271.6 257 58.8
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 6.9e-71 271.6 187 73.8
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 9.0e-71 271.2 187 73.8
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 5.8e-70 268.5 259 60.6
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 1.3e-69 267.3 221 67.0
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 8.4e-69 264.6 253 59.3
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 3.2e-68 262.7 217 67.3
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 4.2e-68 262.3 178 74.7
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 4.2e-68 262.3 259 61.0
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 5.5e-68 261.9 266 59.8
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 7.1e-68 261.5 252 61.1
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 1.6e-67 260.4 238 61.3
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 2.1e-67 260.0 264 56.1
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 2.1e-67 260.0 263 59.3
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 6.0e-67 258.5 181 74.0
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 7.9e-67 258.1 264 57.2
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 7.9e-67 258.1 259 58.3
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 1.3e-66 257.3 178 74.7
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.8e-66 256.9 250 59.2
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 2.3e-66 256.5 168 76.8
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 3.0e-66 256.1 177 74.0
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 3.9e-66 255.8 166 80.1
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 3.9e-66 255.8 265 58.1
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 5.1e-66 255.4 265 57.7
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 5.1e-66 255.4 252 58.7
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 5.1e-66 255.4 244 60.7
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 5.1e-66 255.4 248 60.5
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 1.1e-65 254.2 256 58.2
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 1.1e-65 254.2 179 73.2
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 1.9e-65 253.4 227 63.0
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 1.9e-65 253.4 256 58.6
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 3.3e-65 252.7 250 58.4
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 4.3e-65 252.3 180 72.8
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 9.6e-65 251.1 245 57.6
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 9.6e-65 251.1 176 72.2
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 2.1e-64 250.0 259 57.5
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 3.7e-64 249.2 179 70.9
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 3.7e-64 249.2 259 58.7
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 4.8e-64 248.8 258 57.0
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 6.3e-64 248.4 256 57.8
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 8.2e-64 248.1 255 56.5
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 1.1e-63 247.7 259 57.9
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 1.1e-63 247.7 238 60.1
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 1.4e-63 247.3 256 58.2
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 1.8e-63 246.9 260 57.7
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 2.4e-63 246.5 269 54.3
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 2.4e-63 246.5 166 75.3
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 4.1e-63 245.7 260 58.5
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 5.3e-63 245.4 180 71.7
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 9.0e-63 244.6 257 56.4
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 9.0e-63 244.6 257 58.0
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 1.5e-62 243.8 174 71.3
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 2.0e-62 243.4 174 71.3
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 3.4e-62 242.7 227 58.6
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 4.5e-62 242.3 182 69.8
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.2e-61 240.0 256 57.0
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 2.9e-61 239.6 176 69.3
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 3.8e-61 239.2 261 54.4
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.1e-60 237.7 267 56.2
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 1.1e-60 237.7 248 55.6
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 1.4e-60 237.3 158 77.2
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 1.4e-60 237.3 158 77.2
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 1.9e-60 236.9 186 68.8
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 2.5e-60 236.5 177 70.1
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 5.5e-60 235.3 174 69.0
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 7.2e-60 235.0 280 52.9
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 7.2e-60 235.0 159 75.5
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 9.3e-60 234.6 174 69.5
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 3.6e-59 232.6 154 77.3
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 5.1e-58 228.8 178 64.6
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 8.7e-58 228.0 230 60.0
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 8.7e-58 228.0 185 63.8
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 2.5e-57 226.5 222 58.1
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 1.6e-56 223.8 266 51.5
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 1.6e-56 223.8 182 65.4
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 2.8e-56 223.0 226 56.6
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 6.3e-56 221.9 284 49.6
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 8.2e-56 221.5 235 54.5
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 8.2e-56 221.5 188 64.9
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.4e-55 220.7 179 69.8
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 2.0e-54 216.9 238 54.2
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 3.4e-54 216.1 289 49.5
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 7.7e-54 214.9 239 52.7
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 1.9e-52 210.3 228 57.5
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 9.4e-52 208.0 136 77.2
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 1.6e-51 207.2 142 73.9
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.6e-51 207.2 239 51.9
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 3.9e-50 202.6 261 49.8
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 6.7e-50 201.8 166 62.0
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 1.5e-49 200.7 136 74.3
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 7.4e-49 198.4 164 60.4
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 9.7e-49 198.0 164 61.6
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 1.7e-48 197.2 162 61.1
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 4.8e-48 195.7 152 67.8
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 6.3e-48 195.3 218 53.7
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.8e-47 193.7 229 53.3
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.5e-46 190.7 229 52.4
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 5.0e-45 185.7 190 59.5
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 1.1e-44 184.5 177 59.9
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 6.7e-42 175.3 231 50.2
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 8.8e-42 174.9 257 47.1
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 2.0e-41 173.7 277 45.5
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 3.3e-41 172.9 111 78.4
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 1.7e-40 170.6 269 46.1
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 3.1e-39 166.4 180 55.0
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 4.5e-38 162.5 107 74.8
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 5.7e-33 145.6 172 45.9
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 9.7e-33 144.8 180 45.0
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 5.3e-31 139.0 167 52.7
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 1.2e-25 121.3 155 51.0
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 7.5e-25 118.6 104 56.7
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 5.4e-23 112.5 164 41.5
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 4.2e-20 102.8 195 43.6
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 2.1e-19 100.5 77 66.2
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 2.8e-19 100.1 154 35.1
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 1.3e-16 91.3 80 60.0
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 2.0e-14 84.0 154 34.4
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 3.3e-12 76.6 90 48.9
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 2.3e-10 70.5 58 65.5
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 8.9e-10 68.6 53 60.4


User provided reference genes

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