Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0002780 Simmondsia chinensis HOM05D002142 ORTHO05D001189 5.0e-174 614.8 418 100.0
Sc13g0007330 Simmondsia chinensis HOM05D002142 ORTHO05D001189 3.2e-19 100.5 62 88.7
Hund10364 Selenicereus undatus HOM05D002142 ORTHO05D001189 9.0e-14 82.4 77 57.1
TAR365G0293 Trochodendron aralioides HOM05D002142 ORTHO05D001189 8.4e-12 75.9 76 59.2
vmacro11473 Vaccinium macrocarpon HOM05D002142 ORTHO05D001189 2.1e-10 71.2 76 56.6
Actinidia22237 Actinidia chinensis HOM05D002142 ORTHO05D001189 4.6e-10 70.1 86 52.3
Haze_09224 Corylus avellana HOM05D002142 ORTHO05D001189 7.8e-10 69.3 77 53.2
BcaC05g24889 Brassica carinata HOM05D002142 ORTHO05D001189 2.3e-09 67.8 80 52.5
BolC5t29604H Brassica oleracea HOM05D002142 ORTHO05D001189 2.3e-09 67.8 80 52.5
DCAR_023771 Daucus carota HOM05D002142 ORTHO05D001189 2.3e-09 67.8 78 55.1
THA.LOC104806451 Tarenaya hassleriana HOM05D002142 ORTHO05D001189 3.0e-09 67.4 59 57.6
Lsat_1_v5_gn_6_80720 Lactuca sativa HOM05D002142 ORTHO05D001189 3.9e-09 67.0 79 50.6
MBI18_g03861_MAGBIO Magnolia biondii HOM05D002142 ORTHO05D001189 5.1e-09 66.6 84 52.4
CSS0028442 Camellia sinensis var. sinensis HOM05D002142 ORTHO05D001189 6.6e-09 66.2 86 48.8
CSS0042091 Camellia sinensis var. sinensis HOM05D002142 ORTHO05D001189 6.6e-09 66.2 86 48.8
Nn4g25332 Nelumbo nucifera HOM05D002142 ORTHO05D001189 6.6e-09 66.2 67 56.7
CiPaw.11G107700 Carya illinoinensis HOM05D002142 ORTHO05D001189 8.7e-09 65.9 74 52.7
Rhsim02G0255400 Rhododendron simsii HOM05D002142 ORTHO05D001189 8.7e-09 65.9 77 50.6
Lj2A149G60 Lonicera japonica HOM05D002142 ORTHO05D001189 1.5e-08 65.1 78 53.8
TWI81G0844 Tripterygium wilfordii HOM05D002142 ORTHO05D001189 1.9e-08 64.7 66 57.6
TWI15G0084 Tripterygium wilfordii HOM05D002142 ORTHO05D001189 2.5e-08 64.3 62 59.7
ClCG09G016660 Citrullus lanatus HOM05D002142 ORTHO05D001189 1.3e-07 62.0 76 56.6
Sed0009239 Sechium edule HOM05D002142 ORTHO05D001189 1.3e-07 62.0 77 53.2
vmacro00882 Vaccinium macrocarpon HOM05D002142 ORTHO05D001189 1.6e-07 61.6 80 47.5
BcaC05g24895 Brassica carinata HOM05D002142 ORTHO05D001189 2.1e-07 61.2 81 48.1
Gorai.004G127800 Gossypium raimondii HOM05D002142 ORTHO05D001189 3.6e-07 60.5 82 48.8
Gohir.A08G108000 Gossypium hirsutum HOM05D002142 ORTHO05D001189 8.1e-07 59.3 82 48.8
GSVIVG01019716001 Vitis vinifera HOM05D002142 ORTHO05D001189 1.1e-06 58.9 76 51.3
Migut.E00710 Erythranthe guttata HOM05D002142 ORTHO05D001189 1.4e-06 58.5 79 51.9
CDE09G0186 Ceratophyllum demersum HOM05D002142 ORTHO05D001189 1.8e-06 58.2 77 55.8
MELO3C024716.2 Cucumis melo HOM05D002142 ORTHO05D001189 1.8e-06 58.2 76 55.3
Prupe.5G136300 Prunus persica HOM05D002142 ORTHO05D001189 1.8e-06 58.2 77 48.1
C08p13660 Brassica napus HOM05D002142 ORTHO05D001189 3.1e-06 57.4 98 43.9
BolC8t49004H Brassica oleracea HOM05D002142 ORTHO05D001189 3.1e-06 57.4 98 43.9
Gohir.D08G121000 Gossypium hirsutum HOM05D002142 ORTHO05D001189 3.1e-06 57.4 82 47.6
CSS0007677 Camellia sinensis var. sinensis HOM05D002142 ORTHO05D001189 5.3e-06 56.6 37 70.3
CSS0010798 Camellia sinensis var. sinensis HOM05D002142 ORTHO05D001189 5.3e-06 56.6 37 70.3
CDE02G3369 Ceratophyllum demersum HOM05D002142 ORTHO05D001189 5.3e-06 56.6 77 54.5
Phvul.005G069700 Phaseolus vulgaris HOM05D002142 ORTHO05D001189 6.9e-06 56.2 77 49.4
SGA_v2.0_scaffold88G27237 Striga asiatica HOM05D002142 ORTHO05D001189 9.0e-06 55.8 33 75.8


User provided reference genes

Program Settings