Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0002640 Simmondsia chinensis HOM05D005250 ORTHO05D006342 2.7e-155 552.0 283 100.0
Ah.02g126720 Amaranthus hybridus HOM05D005250 ORTHO05D006342 4.7e-123 444.9 285 78.6
Hund25156 Selenicereus undatus HOM05D005250 ORTHO05D006342 3.8e-117 425.2 256 82.0
AUR62003059 Chenopodium quinoa HOM05D005250 ORTHO05D006342 6.5e-117 424.5 305 73.1
EL10Ac6g14674 Beta vulgaris HOM05D005250 ORTHO05D006342 1.4e-116 423.3 308 72.1
TWI79G0919 Tripterygium wilfordii HOM05D005250 ORTHO05D006342 2.3e-114 416.0 283 74.9
Manes.01G024400 Manihot esculenta HOM05D005250 ORTHO05D006342 2.2e-112 409.5 284 73.9
Ca_22871_v3 Cicer arietinum L. HOM05D005250 ORTHO05D006342 9.1e-111 404.1 289 73.7
TAR623G0863 Trochodendron aralioides HOM05D005250 ORTHO05D006342 1.2e-110 403.7 285 72.6
Sed0024712 Sechium edule HOM05D005250 ORTHO05D006342 2.6e-110 402.5 286 73.1
Actinidia13405 Actinidia chinensis HOM05D005250 ORTHO05D006342 1.7e-109 399.8 283 71.4
Nn7g36775 Nelumbo nucifera HOM05D005250 ORTHO05D006342 2.9e-109 399.1 283 71.4
Lalb_Chr16g0391841 Lupinus albus HOM05D005250 ORTHO05D006342 3.8e-109 398.7 295 72.2
COL.COLO4_27807 Corchorus olitorius HOM05D005250 ORTHO05D002390 8.5e-109 397.5 275 73.8
Gohir.A03G106400 Gossypium hirsutum HOM05D005250 ORTHO05D006342 8.5e-109 397.5 255 78.4
CiPaw.06G094800 Carya illinoinensis HOM05D005250 ORTHO05D006342 5.5e-108 394.8 284 71.1
RcHm_v2.0_Chr4g0437361 Rosa chinensis HOM05D005250 ORTHO05D006342 7.2e-108 394.4 282 71.6
TPR.G3346 Trifolium pratense HOM05D005250 ORTHO05D006342 1.2e-107 393.7 292 71.2
MD16G1056000 Malus domestica HOM05D005250 ORTHO05D006342 1.6e-107 393.3 280 73.9
CAN.G263.5 Capsicum annuum HOM05D005250 ORTHO05D006342 2.1e-107 392.9 288 70.5
Hma1.2p1_0473F.1_g160080 Hydrangea macrophylla HOM05D005250 ORTHO05D006342 2.1e-107 392.9 253 76.3
Prupe.1G293300 Prunus persica HOM05D005250 ORTHO05D006342 2.1e-107 392.9 246 77.6
Gorai.005G147500 Gossypium raimondii HOM05D005250 ORTHO05D006342 6.1e-107 391.3 257 77.0
Medtr8g066180 Medicago truncatula HOM05D005250 ORTHO05D006342 1.4e-106 390.2 291 70.4
PGSC0003DMG400001920 Solanum tuberosum HOM05D005250 ORTHO05D006342 1.4e-106 390.2 271 72.3
Thecc.02G322900 Theobroma cacao HOM05D005250 ORTHO05D006342 1.4e-106 390.2 292 71.2
Phvul.003G280700 Phaseolus vulgaris HOM05D005250 ORTHO05D006342 4.0e-106 388.7 285 72.6
CsaV3_6G033890 Cucumis sativus L. HOM05D005250 ORTHO05D006342 5.2e-106 388.3 273 72.9
Thhalv10004726m.g Eutrema salsugineum HOM05D005250 ORTHO05D006342 5.2e-106 388.3 283 71.0
HanXRQChr12g0365051 Helianthus annuus HOM05D005250 ORTHO05D006342 5.2e-106 388.3 291 69.4
arahy.Tifrunner.gnm1.ann1.78R55B Arachis hypogaea HOM05D005250 ORTHO05D006342 6.7e-106 387.9 278 71.9
FAN12G3515 Fragaria x ananassa HOM05D005250 ORTHO05D006342 1.5e-105 386.7 282 70.6
Sed0000568 Sechium edule HOM05D005250 ORTHO05D006342 2.0e-105 386.3 278 73.4
SalBow2G3543 Salvia bowleyana HOM05D005250 ORTHO05D006342 2.6e-105 386.0 288 68.8
GSVIVG01010104001 Vitis vinifera HOM05D005250 ORTHO05D006342 2.6e-105 386.0 269 74.0
PGR119G1921 Punica granatum HOM05D005250 ORTHO05D006342 3.3e-105 385.6 279 72.8
Atru.chr11.1561 Acer truncatum HOM05D005250 ORTHO05D006342 5.7e-105 384.8 292 70.5
Sopen04g001290 Solanum pennellii HOM05D005250 ORTHO05D006342 5.7e-105 384.8 279 69.2
FvH4_4g29320 Fragaria vesca HOM05D005250 ORTHO05D006342 7.5e-105 384.4 245 76.7
FAN17G2738 Fragaria x ananassa HOM05D000202 ORTHO05D006342 7.5e-105 384.4 250 76.4
Glyma.11G011400 Glycine max HOM05D005250 ORTHO05D006342 7.5e-105 384.4 260 75.4
Rhsim09G0122300 Rhododendron simsii HOM05D005250 ORTHO05D006342 7.5e-105 384.4 308 66.6
BcaC04g21447 Brassica carinata HOM05D005250 ORTHO05D006342 9.7e-105 384.0 284 70.1
Lj3A1027G83 Lonicera japonica HOM05D005250 ORTHO05D006342 1.7e-104 383.3 268 72.8
FAN22G1621 Fragaria x ananassa HOM05D000202 ORTHO05D006342 2.8e-104 382.5 280 70.4
Psat4g092800 Pisum sativum HOM05D005250 ORTHO05D006342 3.7e-104 382.1 287 70.7
Sp2g14610 Schrenkiella parvula HOM05D005250 ORTHO05D006342 3.7e-104 382.1 278 70.5
arahy.Tifrunner.gnm1.ann1.F58IRU Arachis hypogaea HOM05D005250 ORTHO05D006342 4.8e-104 381.7 285 70.5
Nitab4.5_0000591g0010 Nicotiana tabacum HOM05D005250 ORTHO05D006342 4.8e-104 381.7 290 69.0
Migut.L01163 Erythranthe guttata HOM05D005250 ORTHO05D006342 6.3e-104 381.3 288 68.4
BcaB07g30645 Brassica carinata HOM05D005250 ORTHO05D006342 8.2e-104 380.9 284 69.4
C09p31650 Brassica napus HOM05D005250 ORTHO05D006342 8.2e-104 380.9 279 70.6
Carub.0005s0293 Capsella rubella HOM05D005250 ORTHO05D006342 1.1e-103 380.6 283 68.6
AL5G13570 Arabidopsis lyrata HOM05D005250 ORTHO05D006342 1.4e-103 380.2 284 68.7
BraA09t38059Z Brassica rapa HOM05D005250 ORTHO05D000117 1.4e-103 380.2 279 70.6
Duzib251G0604 Durio zibethinus HOM05D005250 ORTHO05D006342 1.4e-103 380.2 283 71.4
A09p24730 Brassica napus HOM05D005250 ORTHO05D000117 2.4e-103 379.4 279 70.6
Lj2g0021011 Lotus japonicus HOM05D005250 ORTHO05D006342 5.3e-103 378.3 288 68.4
MBI19_g36132_MAGBIO Magnolia biondii HOM05D005250 ORTHO05D006342 1.6e-102 376.7 251 72.5
PSO339G6010 Papaver somniferum HOM05D005250 ORTHO05D006342 1.6e-102 376.7 282 67.0
Ciclev10032293m.g Citrus clementina HOM05D005250 ORTHO05D006342 2.0e-102 376.3 272 72.4
Eucgr.G02422 Eucalyptus grandis HOM05D005250 ORTHO05D006342 2.7e-102 375.9 275 71.3
CARHR146190 Cardamine hirsuta HOM05D005250 ORTHO05D006342 3.5e-102 375.6 285 67.4
PSO384G2373 Papaver somniferum HOM05D005250 ORTHO05D006342 4.5e-102 375.2 282 66.7
Cc11_g11570 Coffea canephora HOM05D005250 ORTHO05D006342 7.7e-102 374.4 235 78.7
MELO3C011403.2 Cucumis melo HOM05D005250 ORTHO05D006342 1.0e-101 374.0 237 78.9
THA.LOC104805209 Tarenaya hassleriana HOM05D005250 ORTHO05D006342 1.3e-101 373.6 270 68.9
Lsat_1_v5_gn_8_35661 Lactuca sativa HOM05D005250 ORTHO05D006342 3.8e-101 372.1 278 68.7
unitig_26.g10282 Utricularia gibba HOM05D005250 ORTHO05D006342 8.5e-101 370.9 300 64.7
MD13G1056700 Malus domestica HOM05D005250 ORTHO05D006342 2.5e-100 369.4 247 74.9
SGA_v2.0_scaffold36G14486 Striga asiatica HOM05D005250 ORTHO05D006342 2.5e-100 369.4 306 65.4
Psat4g118880 Pisum sativum HOM05D005250 ORTHO05D006342 2.7e-99 365.9 286 68.2
AUR62007874 Chenopodium quinoa HOM05D005250 ORTHO05D006342 3.0e-98 362.5 238 77.7
ECA233G0908 Erigeron canadensis HOM05D005250 ORTHO05D006342 8.8e-98 360.9 279 64.5
Potri.010G138300 Populus trichocarpa HOM05D005250 ORTHO05D006342 8.8e-98 360.9 284 68.7
CANSAT64G2789 Cannabis sativa HOM05D005250 ORTHO05D006342 2.0e-97 359.8 223 77.6
CSS0000657 Camellia sinensis var. sinensis HOM05D005250 ORTHO05D006342 2.6e-97 359.4 223 78.9
ClCG08G010590 Citrullus lanatus HOM05D005250 ORTHO05D006342 1.7e-96 356.7 283 66.4
ATR1096G147 Amborella trichopoda HOM05D005250 ORTHO05D006342 4.8e-96 355.1 252 70.6
MSTRG.778 Avicennia marina HOM05D005250 ORTHO05D006342 3.1e-95 352.4 277 66.1
Oeu048123.1 Olea europaea HOM05D005250 ORTHO05D006342 2.7e-94 349.4 290 63.1
Os01g0265900 Oryza sativa ssp. japonica HOM05D005250 ORTHO05D006342 8.6e-93 344.4 241 71.0
BcaC04g19887 Brassica carinata HOM05D005250 ORTHO05D006342 2.5e-92 342.8 253 68.0
Aa31LG2G6930 Aethionema arabicum HOM05D005250 ORTHO05D006342 1.6e-91 340.1 255 67.5
Aqoxy2G00415 Aquilegia oxysepala HOM05D005250 ORTHO05D006342 8.0e-91 337.8 254 66.5
Haze_11860 Corylus avellana HOM05D005250 ORTHO05D006342 1.5e-89 333.6 288 62.2
Sabra10G0106500 Salix brachista HOM05D005250 ORTHO05D006342 2.6e-89 332.8 257 69.3
CDE02G4654 Ceratophyllum demersum HOM05D005250 ORTHO05D006342 5.7e-89 331.6 244 67.6
Zm00001eb333230 Zea mays HOM05D005250 ORTHO05D006342 3.7e-88 328.9 280 62.5
DCAR_007208 Daucus carota HOM05D005250 ORTHO05D006342 1.8e-87 326.6 223 72.2
BcaC06g35305 Brassica carinata HOM05D005250 ORTHO05D006342 4.1e-87 325.5 273 63.7
Nitab4.5_0000014g0530 Nicotiana tabacum HOM05D005250 ORTHO05D006342 5.4e-87 325.1 223 73.5
Gohir.D02G131600 Gossypium hirsutum HOM05D005250 ORTHO05D006342 1.2e-83 313.9 198 78.8
MBI19_g20787_MAGBIO Magnolia biondii HOM05D005250 ORTHO05D006342 2.3e-82 309.7 284 60.6
vmacro10476 Vaccinium macrocarpon HOM05D005250 ORTHO05D006342 6.8e-82 308.1 328 54.9
Solyc04g005310.3 Solanum lycopersicum HOM05D005250 ORTHO05D006342 1.7e-80 303.5 196 74.5
arahy.Tifrunner.gnm1.ann1.LMD1JY Arachis hypogaea HOM05D005250 ORTHO05D006342 4.9e-80 302.0 280 58.6
AT2G03780 Arabidopsis thaliana HOM05D005250 ORTHO05D006342 2.4e-79 299.7 197 73.1
C04p21460 Brassica napus HOM05D005250 ORTHO05D006342 9.2e-79 297.7 286 59.4
BcaC09g49168 Brassica carinata HOM05D005250 ORTHO05D006342 6.0e-78 295.0 205 73.2
Peaxi162Scf00873g00111 Petunia axillaris HOM05D005250 ORTHO05D006342 2.5e-76 289.7 233 63.9
Dinv34022 Davidia involucrata HOM05D005250 ORTHO05D006342 6.2e-75 285.0 172 78.5
SHI16015 Sapria himalayana HOM05D005250 ORTHO05D006342 5.2e-74 282.0 195 71.8
BolC4t23671H Brassica oleracea HOM05D005250 ORTHO05D006342 8.9e-74 281.2 358 48.6
Hma1.2p1_1307F.1_g274740 Hydrangea macrophylla HOM05D005250 ORTHO05D006342 4.6e-70 268.9 176 76.1
HPP92_021194 Vanilla planifolia HOM05D005250 ORTHO05D006342 2.5e-68 263.1 264 54.2
EL10Ac8g19720 Beta vulgaris HOM05D005250 ORTHO05D006342 5.4e-63 245.4 223 60.1
Mapoly0009s0086 Marchantia polymorpha HOM05D005250 ORTHO05D006342 3.9e-61 239.2 246 49.6
AagrBONN_evm.TU.Sc2ySwM_117.326 Anthoceros agrestis HOM05D005250 ORTHO05D006342 3.6e-59 232.6 229 51.1
SMO236G0018 Selaginella moellendorffii HOM05D005250 ORTHO05D006342 1.9e-55 220.3 241 48.1
C07p17630 Brassica napus HOM05D005250 ORTHO05D006342 2.3e-53 213.4 297 46.8
arahy.Tifrunner.gnm1.ann1.M1Z73T Arachis hypogaea HOM05D005250 ORTHO05D006342 2.5e-52 209.9 199 57.8
SEGI_07586 Sequoiadendron giganteum HOM05D005250 ORTHO05D006342 2.5e-44 183.3 167 53.9
Hma1.2p1_0473F.1_g160070 Hydrangea macrophylla HOM05D005250 ORTHO05D006342 4.0e-42 176.0 133 67.7
BolC9t57871H Brassica oleracea HOM05D005250 ORTHO05D006342 1.9e-39 167.2 264 43.6
Hma1.2p1_0473F.1_g160090 Hydrangea macrophylla HOM05D005250 ORTHO05D006342 1.1e-34 151.4 91 80.2
A07p01490 Brassica napus HOM05D005250 ORTHO05D006342 3.5e-30 136.3 145 57.9
BraA04t18025Z Brassica rapa HOM05D005250 ORTHO05D006342 7.9e-30 135.2 119 61.3
C09p61860 Brassica napus HOM05D005250 ORTHO05D006342 3.7e-27 126.3 145 54.5
A05p26370 Brassica napus HOM05D005250 ORTHO05D006342 1.4e-23 114.4 145 50.3
Aa31LG5G22420 Aethionema arabicum HOM05D001647 ORTHO05D001191 5.5e-23 112.5 135 51.9
A03p09860 Brassica napus HOM05D001868 ORTHO05D003985 6.0e-22 109.0 73 78.1
CBR_g489 Chara braunii HOM05D000019 ORTHO05D000048 2.5e-20 103.6 85 56.5
PGSC0003DMG400008670 Solanum tuberosum HOM05D005250 ORTHO05D006342 5.7e-20 102.4 78 61.5
SEGI_14635 Sequoiadendron giganteum HOM05D005250 ORTHO05D006342 2.2e-19 100.5 170 35.3
BolC7t42269H Brassica oleracea HOM05D005250 ORTHO05D006342 6.9e-18 95.5 300 31.0
C08p18960 Brassica napus HOM05D005250 ORTHO05D006342 1.2e-17 94.7 79 65.8
RcHm_v2.0_Chr3g0459601 Rosa chinensis HOM05D005250 ORTHO05D006342 1.7e-16 90.9 59 69.5
Ah.03g138620 Amaranthus hybridus HOM05D005250 ORTHO05D006342 1.9e-15 87.4 50 82.0
RcHm_v2.0_Chr3g0459611 Rosa chinensis HOM05D005250 ORTHO05D006342 4.2e-15 86.3 57 71.9
BolC7t43944H Brassica oleracea HOM05D005250 ORTHO05D006342 5.5e-15 85.9 200 34.5
C07p34180 Brassica napus HOM05D005250 ORTHO05D006342 1.2e-14 84.7 143 39.9
BcaB07g30653 Brassica carinata HOM05D005250 ORTHO05D006342 3.6e-14 83.2 55 70.9
BcaB07g30654 Brassica carinata HOM05D005250 ORTHO05D006342 3.6e-14 83.2 55 70.9
Glyma.01G228600 Glycine max HOM05D005250 ORTHO05D006342 3.6e-14 83.2 51 74.5
BcaC03g14881 Brassica carinata HOM05D022129 ORTHO05D027289 1.8e-13 80.9 101 47.5
Cfa027242 Carpinus fangiana HOM05D005250 ORTHO05D006342 3.0e-13 80.1 235 27.2
SGA_v2.0_scaffold139G35371 Striga asiatica HOM05D005250 ORTHO05D006342 5.1e-13 79.3 110 40.9
SGA_v2.0_scaffold32G13106 Striga asiatica HOM05D005250 ORTHO05D006342 1.3e-11 74.7 89 47.2
A02p10340 Brassica napus HOM05D022129 ORTHO05D006342 1.4e-10 71.2 92 46.7
A03p09870 Brassica napus HOM05D005250 ORTHO05D006342 1.8e-10 70.9 87 52.9
SEGI_39770 Sequoiadendron giganteum HOM05D005250 ORTHO05D006342 3.1e-10 70.1 59 52.5
CBR_g45408 Chara braunii HOM05D006384 ORTHO05D007917 4.1e-10 69.7 237 22.8
BcaB07g30647 Brassica carinata HOM05D005250 ORTHO05D006342 6.9e-10 68.9 56 62.5
Oeu016975.2 Olea europaea HOM05D006384 ORTHO05D007917 1.4e-07 61.2 223 22.0
SEGI_17465 Sequoiadendron giganteum HOM05D005250 ORTHO05D006342 1.9e-07 60.8 37 75.7
SEGI_26624 Sequoiadendron giganteum HOM05D006384 ORTHO05D007917 2.5e-07 60.5 225 23.1
Lalb_Chr20g0112661 Lupinus albus HOM05D006384 ORTHO05D007917 4.2e-07 59.7 221 24.9
FAN14G1974 Fragaria x ananassa HOM05D006384 ORTHO05D007917 1.2e-06 58.2 203 24.6
FAN14G4113 Fragaria x ananassa HOM05D006384 ORTHO05D007917 1.2e-06 58.2 203 24.6
EL10Ac1g01937 Beta vulgaris HOM05D005250 ORTHO05D006342 1.6e-06 57.8 59 55.9
CDE06G0314 Ceratophyllum demersum HOM05D006384 ORTHO05D007917 3.6e-06 56.6 231 23.8
ECA248G2568 Erigeron canadensis HOM05D006384 ORTHO05D007917 3.6e-06 56.6 217 22.1
FAN02G0742 Fragaria x ananassa HOM05D006384 ORTHO05D007917 3.6e-06 56.6 262 22.5
CiPaw.10G132500 Carya illinoinensis HOM05D006384 ORTHO05D007917 6.1e-06 55.8 223 21.5
HanXRQChr01g0027531 Helianthus annuus HOM05D006384 ORTHO05D007917 6.1e-06 55.8 231 22.1
Mapoly0009s0045 Marchantia polymorpha HOM05D006384 ORTHO05D007917 7.9e-06 55.5 226 21.7


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