Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0002590 Simmondsia chinensis HOM05D010674 ORTHO05D012685 5.5e-153 544.3 274 100.0
Sc03g0005810 Simmondsia chinensis HOM05D010674 ORTHO05D012685 9.4e-113 410.6 285 78.2
Sc17g0004480 Simmondsia chinensis HOM05D010674 ORTHO05D012685 4.3e-89 332.0 303 64.4
Sc10g0005220 Simmondsia chinensis HOM05D010674 ORTHO05D012685 6.0e-67 258.5 285 55.4
Sc12g0007830 Simmondsia chinensis HOM05D010674 ORTHO05D012685 6.2e-48 195.3 113 84.1
Sc08g0004310 Simmondsia chinensis HOM05D010674 ORTHO05D012685 1.5e-46 190.7 121 77.7
Sc18g0002940 Simmondsia chinensis HOM05D010674 ORTHO05D012685 4.6e-43 179.1 225 50.2
Sc05g0002760 Simmondsia chinensis HOM05D010674 ORTHO05D012685 4.3e-41 172.6 123 78.0
Sc18g0002930 Simmondsia chinensis HOM05D010674 ORTHO05D012685 4.0e-39 166.0 155 59.4
Sc11g0003480 Simmondsia chinensis HOM05D010674 ORTHO05D012685 4.9e-29 132.5 283 33.9
Sc11g0005960 Simmondsia chinensis HOM05D010674 ORTHO05D012685 1.8e-26 124.0 276 33.7
Sc02g0004660 Simmondsia chinensis HOM05D010674 ORTHO05D012685 2.2e-24 117.1 217 35.0
Sc25g0004080 Simmondsia chinensis HOM05D010674 ORTHO05D012685 1.8e-23 114.0 69 79.7
AUR62010149 Chenopodium quinoa HOM05D001385 ORTHO05D004434 2.0e-22 110.5 208 33.2
Sc08g0003870 Simmondsia chinensis HOM05D010674 ORTHO05D012685 1.3e-21 107.8 270 31.1
Hund07415 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.9e-21 106.7 217 30.4
AUR62013145 Chenopodium quinoa HOM05D001385 ORTHO05D000378 6.5e-21 105.5 205 32.7
Sc08g0005020 Simmondsia chinensis HOM05D004066 ORTHO05D004434 1.1e-20 104.8 233 32.6
Sc25g0003090 Simmondsia chinensis HOM05D010674 ORTHO05D012685 1.6e-19 100.9 83 62.7
Sc11g0006030 Simmondsia chinensis HOM05D010674 ORTHO05D012685 6.1e-19 99.0 281 30.2
Hund06374 Selenicereus undatus HOM05D001385 ORTHO05D004434 7.9e-19 98.6 205 27.8
Sc13g0007340 Simmondsia chinensis HOM05D001385 ORTHO05D004434 6.7e-18 95.5 170 35.9
COL.COLO4_15867 Corchorus olitorius HOM05D001309 ORTHO05D004434 1.1e-17 94.7 179 31.3
COL.COLO4_15532 Corchorus olitorius HOM05D001309 ORTHO05D000385 2.2e-16 90.5 179 30.7
Hund20142 Selenicereus undatus HOM05D001385 ORTHO05D008760 1.4e-15 87.8 228 30.7
Sc02g0005790 Simmondsia chinensis HOM05D010674 ORTHO05D012685 9.1e-15 85.1 85 55.3
Hund24304 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.0e-14 84.0 267 25.5
Sc05g0003850 Simmondsia chinensis HOM05D010674 ORTHO05D012685 7.7e-14 82.0 54 68.5
Hund28935 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.3e-13 81.3 267 27.0
ClCG06G005780 Citrullus lanatus HOM05D001309 ORTHO05D000385 2.2e-13 80.5 148 31.8
Nitab4.5_0004285g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.2e-13 80.5 194 31.4
Hund19989 Selenicereus undatus HOM05D041637 ORTHO05D030589 2.9e-13 80.1 219 27.9
Hund24609 Selenicereus undatus HOM05D001385 ORTHO05D008760 3.8e-13 79.7 113 33.6
MBI15_g13426_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.9e-12 77.4 159 30.2
Sc11g0006000 Simmondsia chinensis HOM05D004066 ORTHO05D004434 1.9e-12 77.4 206 29.6
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.5e-12 77.0 235 25.5
EL10Ac5g11714 Beta vulgaris HOM05D000107 ORTHO05D000062 4.2e-12 76.3 190 31.6
EL10Ac9g21493 Beta vulgaris HOM05D001385 ORTHO05D004434 5.5e-12 75.9 165 32.1
Hund22037 Selenicereus undatus HOM05D004066 ORTHO05D004434 5.5e-12 75.9 257 24.1
vmacro21926 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 5.5e-12 75.9 215 28.8
vmacro23420 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 5.5e-12 75.9 215 28.8
EL10Ac1g01824 Beta vulgaris HOM05D001385 ORTHO05D008760 1.2e-11 74.7 190 31.6
Hund28780 Selenicereus undatus HOM05D009609 ORTHO05D011572 1.2e-11 74.7 213 27.7
Hund28782 Selenicereus undatus HOM05D009609 ORTHO05D011572 1.2e-11 74.7 213 27.7
AUR62043798 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.6e-11 74.3 167 29.3
Hund22136 Selenicereus undatus HOM05D001385 ORTHO05D004434 1.6e-11 74.3 146 30.1
EL10Ac1g01188 Beta vulgaris HOM05D001385 ORTHO05D008760 2.7e-11 73.6 202 29.2
AUR62028470 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.7e-11 73.6 194 26.8
COL.COLO4_06576 Corchorus olitorius HOM05D001309 ORTHO05D000385 2.7e-11 73.6 142 32.4
EL10Ac1g01131 Beta vulgaris HOM05D001385 ORTHO05D008760 6.1e-11 72.4 202 27.7
EL10Ac2g03907 Beta vulgaris HOM05D001385 ORTHO05D008760 6.1e-11 72.4 202 27.7
EL10Ac4g08894 Beta vulgaris HOM05D001385 ORTHO05D008760 6.1e-11 72.4 202 27.7
EL10Ac4g09023 Beta vulgaris HOM05D001385 ORTHO05D008760 6.1e-11 72.4 202 27.7
EL10Ac6g14099 Beta vulgaris HOM05D001385 ORTHO05D008760 6.1e-11 72.4 202 27.7
EL10Ac9g21092 Beta vulgaris HOM05D001385 ORTHO05D008760 6.1e-11 72.4 202 27.7
Nitab4.5_0000285g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.1e-11 72.4 151 30.5
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.9e-11 72.0 197 26.9
Nitab4.5_0016483g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.9e-11 72.0 199 29.6
Hund03874 Selenicereus undatus HOM05D009609 ORTHO05D011572 7.9e-11 72.0 230 26.1
Hund04460 Selenicereus undatus HOM05D009609 ORTHO05D011572 1.0e-10 71.6 226 27.0
Sc02g0007440 Simmondsia chinensis HOM05D009609 ORTHO05D011572 1.8e-10 70.9 154 32.5
Hund13048 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.0e-10 70.1 335 22.1
AUR62002718 Chenopodium quinoa HOM05D001385 ORTHO05D008760 3.9e-10 69.7 168 28.6
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 3.9e-10 69.7 229 28.8
vmacro22655 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 3.9e-10 69.7 248 25.4
EL10Ac8g19807 Beta vulgaris HOM05D001385 ORTHO05D008760 5.1e-10 69.3 202 28.2
AUR62013585 Chenopodium quinoa HOM05D001385 ORTHO05D008760 6.7e-10 68.9 168 28.6
COL.COLO4_21802 Corchorus olitorius HOM05D001309 ORTHO05D000385 8.8e-10 68.6 179 27.4
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 8.8e-10 68.6 226 25.2
Solyc04g150154.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 1.1e-09 68.2 162 27.8
AUR62032223 Chenopodium quinoa HOM05D008576 ORTHO05D003213 1.5e-09 67.8 182 27.5
Sc21g0002860 Simmondsia chinensis HOM05D009609 ORTHO05D011572 2.6e-09 67.0 135 35.6
Hund10449 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.3e-09 66.6 164 27.4
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 4.4e-09 66.2 191 30.4
Nitab4.5_0000804g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.4e-09 66.2 223 26.0
TAR376G0246 Trochodendron aralioides HOM05D001309 ORTHO05D000385 4.4e-09 66.2 222 23.0
Hund17497 Selenicereus undatus HOM05D009609 ORTHO05D011572 5.7e-09 65.9 194 28.4
Nitab4.5_0004695g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.7e-09 65.1 186 28.0
Peaxi162Scf00050g00139 Petunia axillaris HOM05D001309 ORTHO05D000385 9.7e-09 65.1 169 28.4
Sc25g0003740 Simmondsia chinensis HOM05D009609 ORTHO05D011572 9.7e-09 65.1 107 36.4
Sc02g0005590 Simmondsia chinensis HOM05D010674 ORTHO05D012685 1.3e-08 64.7 70 44.3
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 1.7e-08 64.3 223 26.9
Nitab4.5_0010441g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-08 64.3 186 28.0
Sc14g0001950 Simmondsia chinensis HOM05D010674 ORTHO05D012685 2.2e-08 63.9 96 41.7
AUR62044135 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.8e-08 63.5 205 28.8
Manes.16G033751 Manihot esculenta HOM05D001309 ORTHO05D000385 2.8e-08 63.5 209 25.8
Nitab4.5_0001346g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.8e-08 63.5 191 27.2
vmacro03917 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 2.8e-08 63.5 218 27.5
TAR375G1128 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.7e-08 63.2 217 23.0
EL10Ac1g02060 Beta vulgaris HOM05D001385 ORTHO05D008760 4.8e-08 62.8 200 27.0
Nitab4.5_0012715g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.8e-08 62.8 203 28.6
Manes.16G057789 Manihot esculenta HOM05D008576 ORTHO05D012685 1.1e-07 61.6 124 29.0
Sc11g0006850 Simmondsia chinensis HOM05D001309 ORTHO05D000385 1.1e-07 61.6 176 26.1
TAR633G1156 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.1e-07 61.6 217 23.0
COL.COLO4_33862 Corchorus olitorius HOM05D001309 ORTHO05D000385 1.4e-07 61.2 189 26.5
TAR365G0008 Trochodendron aralioides HOM05D001163 ORTHO05D001769 1.8e-07 60.8 240 22.5
AUR62040137 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.4e-07 60.5 208 29.8
MBI03_g15598_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.4e-07 60.5 188 27.7
Hund17813 Selenicereus undatus HOM05D009900 ORTHO05D011543 2.4e-07 60.5 185 26.5
EL10Ac6g14499 Beta vulgaris HOM05D001385 ORTHO05D008760 3.1e-07 60.1 221 27.1
COL.COLO4_29219 Corchorus olitorius HOM05D001309 ORTHO05D000385 4.1e-07 59.7 174 27.6
Lj1g0003177 Lotus japonicus HOM05D002954 ORTHO05D003353 4.1e-07 59.7 155 29.7
Haze_06052 Corylus avellana HOM05D022078 ORTHO05D024871 5.3e-07 59.3 244 23.4
MBI06_g39196_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.3e-07 59.3 210 23.8
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 5.3e-07 59.3 187 27.8
TAR365G0123 Trochodendron aralioides HOM05D001309 ORTHO05D000385 5.3e-07 59.3 247 21.9
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 5.3e-07 59.3 247 21.9
EL10Ac9g20910 Beta vulgaris HOM05D001385 ORTHO05D008760 6.9e-07 58.9 221 27.1
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.9e-07 58.9 175 26.3
AUR62029692 Chenopodium quinoa HOM05D001385 ORTHO05D008760 9.1e-07 58.5 95 29.5
Prupe.1G578800 Prunus persica HOM05D005763 ORTHO05D005970 9.1e-07 58.5 235 23.4
Nitab4.5_0000024g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-06 58.2 191 26.2
Nitab4.5_0000789g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-06 58.2 228 26.3
Hund12967 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.2e-06 58.2 95 32.6
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 1.2e-06 58.2 247 21.9
CSS0017872 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.0e-06 57.4 176 25.6
MD15G1435100 Malus domestica HOM05D008595 ORTHO05D000669 2.0e-06 57.4 209 22.5
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 2.0e-06 57.4 210 23.3
Hund08112 Selenicereus undatus HOM05D009609 ORTHO05D011572 2.0e-06 57.4 244 24.6
Hund13844 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.0e-06 57.4 220 23.6
vmacro03942 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 2.0e-06 57.4 187 26.7
CSS0007321 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.4e-06 56.6 176 25.6
CSS0015098 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.4e-06 56.6 210 25.7
AUR62035309 Chenopodium quinoa HOM05D001385 ORTHO05D008760 3.4e-06 56.6 122 33.6
AUR62040146 Chenopodium quinoa HOM05D001385 ORTHO05D008760 3.4e-06 56.6 202 25.2
Nitab4.5_0002394g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.4e-06 56.6 132 30.3
TWI15G0427 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 3.4e-06 56.6 204 24.5
AUR62020405 Chenopodium quinoa HOM05D001385 ORTHO05D008760 4.5e-06 56.2 147 29.3
MBI01_g25641_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.5e-06 56.2 169 27.8
MD02G1315300 Malus domestica HOM05D008315 ORTHO05D009452 4.5e-06 56.2 202 25.7
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 4.5e-06 56.2 209 23.0
Hund13607 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.5e-06 56.2 154 26.6
CSS0011055 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.9e-06 55.8 176 25.6
CSS0011333 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.9e-06 55.8 178 26.4
CSS0042181 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.9e-06 55.8 176 25.6
MBI11_g19485_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.9e-06 55.8 98 35.7
Nitab4.5_0001199g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.9e-06 55.8 242 24.4
Rhsim01G0104600 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.9e-06 55.8 195 23.6
Hund18060 Selenicereus undatus HOM05D009609 ORTHO05D011572 5.9e-06 55.8 148 27.7
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 7.7e-06 55.5 210 22.9
EL10Ac7g18151 Beta vulgaris HOM05D001385 ORTHO05D008760 7.7e-06 55.5 221 26.7
CSS0004946 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 7.7e-06 55.5 176 25.6
Ca_03001_v3 Cicer arietinum L. HOM05D001309 ORTHO05D000385 7.7e-06 55.5 162 27.8
Nitab4.5_0005139g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.7e-06 55.5 138 29.7
Nitab4.5_0028686g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.7e-06 55.5 106 34.0
Hund01689 Selenicereus undatus HOM05D009609 ORTHO05D011572 7.7e-06 55.5 244 24.6
TAR362G1088 Trochodendron aralioides HOM05D001309 ORTHO05D000385 7.7e-06 55.5 211 25.6
TAR369G0469 Trochodendron aralioides HOM05D001309 ORTHO05D000385 7.7e-06 55.5 216 22.7


User provided reference genes

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