Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0002430 Simmondsia chinensis HOM05D008924 ORTHO05D010909 5.2e-39 164.1 93 100.0
RhsimUnG0149800 Rhododendron simsii HOM05D008924 ORTHO05D010909 8.7e-10 67.0 101 42.6
Prupe.1G291000 Prunus persica HOM05D008924 ORTHO05D010909 1.9e-09 65.9 94 44.7
Gohir.A12G159750 Gossypium hirsutum HOM05D008924 ORTHO05D010909 7.3e-09 63.9 44 68.2
Gorai.008G175600 Gossypium raimondii HOM05D008924 ORTHO05D010909 4.8e-08 61.2 44 63.6
Manes.05G111400 Manihot esculenta HOM05D008924 ORTHO05D010909 6.2e-08 60.8 94 39.4
Gohir.D12G162950 Gossypium hirsutum HOM05D008924 ORTHO05D010909 1.1e-07 60.1 44 61.4
Thecc.02G325400 Theobroma cacao HOM05D008924 ORTHO05D010909 1.4e-07 59.7 95 38.9
Cfa021028 Carpinus fangiana HOM05D008924 ORTHO05D010909 3.1e-07 58.5 91 41.8
Cfa008852 Carpinus fangiana HOM05D008924 ORTHO05D010909 4.0e-07 58.2 56 51.8
COL.COLO4_27839 Corchorus olitorius HOM05D008924 ORTHO05D010909 6.9e-07 57.4 91 38.5
Dinv00754 Davidia involucrata HOM05D008924 ORTHO05D010909 3.4e-06 55.1 91 39.6
Dinv20139 Davidia involucrata HOM05D008924 ORTHO05D010909 4.4e-06 54.7 93 39.8
Glyma.18G236300 Glycine max HOM05D020131 ORTHO05D025638 5.8e-06 54.3 32 68.8
TWI31G1119 Tripterygium wilfordii HOM05D008924 ORTHO05D010909 5.8e-06 54.3 100 36.0
TAR013G0005 Trochodendron aralioides HOM05D023566 ORTHO05D019676 5.8e-06 54.3 45 57.8
VMungo0720G2482 Vigna mungo HOM05D020131 ORTHO05D025638 5.8e-06 54.3 31 71.0
QL11p007253 Quercus lobata HOM05D008924 ORTHO05D010909 7.6e-06 53.9 69 40.6
Glyma.02G003000 Glycine max HOM05D020131 ORTHO05D025638 9.9e-06 53.5 32 68.8


User provided reference genes

Program Settings