Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 3.2e-43 179.5 245 100.0
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 5.2e-22 109.0 113 69.0
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 2.6e-21 106.7 116 50.0
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 6.4e-20 102.1 116 65.5
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 6.4e-20 102.1 113 67.3
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 8.4e-20 101.7 114 64.0
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 1.4e-19 100.9 114 54.4
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 1.9e-19 100.5 115 63.5
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 1.9e-19 100.5 112 50.9
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 3.2e-19 99.8 115 47.8
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 3.2e-19 99.8 115 47.8
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 3.2e-19 99.8 115 47.8
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 4.1e-19 99.4 113 60.2
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 7.1e-19 98.6 115 60.9
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 9.2e-19 98.2 114 66.7
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 9.2e-19 98.2 116 62.9
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 1.2e-18 97.8 115 51.3
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 1.2e-18 97.8 115 61.7
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 1.2e-18 97.8 113 48.7
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 2.1e-18 97.1 115 64.3
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 2.1e-18 97.1 115 46.1
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 2.7e-18 96.7 116 60.3
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 2.7e-18 96.7 113 57.5
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 3.5e-18 96.3 115 63.5
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 4.6e-18 95.9 116 59.5
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 7.8e-18 95.1 117 61.5
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 7.8e-18 95.1 115 53.0
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 7.8e-18 95.1 108 50.0
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 1.3e-17 94.4 115 58.3
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 1.3e-17 94.4 120 62.5
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 1.3e-17 94.4 115 48.7
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 1.7e-17 94.0 115 59.1
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 1.7e-17 94.0 105 64.8
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 2.3e-17 93.6 103 50.5
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 2.3e-17 93.6 113 49.6
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 2.3e-17 93.6 105 64.8
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 3.0e-17 93.2 113 61.1
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 3.9e-17 92.8 118 45.8
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 3.9e-17 92.8 113 48.7
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 5.1e-17 92.4 100 61.0
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 6.6e-17 92.0 102 52.9
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 1.1e-16 91.3 115 60.9
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 1.1e-16 91.3 115 46.1
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 1.5e-16 90.9 116 45.7
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 1.5e-16 90.9 117 59.0
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 4.3e-16 89.4 115 59.1
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 5.6e-16 89.0 115 46.1
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 5.6e-16 89.0 102 51.0
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 7.3e-16 88.6 113 59.3
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.2e-15 87.8 116 43.1
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 1.2e-15 87.8 101 57.4
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 1.2e-15 87.8 112 56.2
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 1.2e-15 87.8 115 45.2
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 1.6e-15 87.4 116 56.0
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 1.6e-15 87.4 115 57.4
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 2.1e-15 87.0 117 56.4
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.8e-15 86.7 118 44.1
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 3.6e-15 86.3 113 57.5
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 6.2e-15 85.5 119 52.1
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 1.1e-14 84.7 112 59.8
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 1.1e-14 84.7 113 60.2
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 1.4e-14 84.3 118 59.3
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 1.8e-14 84.0 114 63.2
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 2.4e-14 83.6 115 59.1
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 2.4e-14 83.6 101 63.4
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 3.1e-14 83.2 116 56.0
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 4.0e-14 82.8 110 60.9
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 5.2e-14 82.4 113 56.6
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 5.2e-14 82.4 141 41.1
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 5.2e-14 82.4 103 62.1
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 5.2e-14 82.4 113 55.8
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 6.9e-14 82.0 90 51.1
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 1.5e-13 80.9 115 58.3
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 1.5e-13 80.9 119 57.1
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 1.5e-13 80.9 120 58.3
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 1.5e-13 80.9 110 45.5
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 2.0e-13 80.5 103 61.2
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 2.0e-13 80.5 101 62.4
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.6e-13 80.1 90 50.0
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 4.4e-13 79.3 90 50.0
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 4.4e-13 79.3 90 50.0
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 5.8e-13 79.0 118 54.2
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 5.8e-13 79.0 111 58.6
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 5.8e-13 79.0 101 61.4
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 9.9e-13 78.2 101 55.4
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 1.3e-12 77.8 117 59.0
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 2.2e-12 77.0 76 52.6
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 2.9e-12 76.6 112 54.5
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 4.9e-12 75.9 113 61.1
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 8.4e-12 75.1 115 51.3
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 1.1e-11 74.7 114 54.4
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 1.1e-11 74.7 101 60.4
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 1.9e-11 73.9 113 58.4
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 1.9e-11 73.9 115 54.8
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 7.1e-11 72.0 82 47.6
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 9.3e-11 71.6 69 53.6
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 2.1e-10 70.5 109 39.4
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 4.6e-10 69.3 73 50.7
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 7.8e-10 68.6 115 40.0
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 1.3e-09 67.8 113 53.1
Zm00001eb214530 Zea mays HOM05D006591 ORTHO05D007861 3.0e-09 66.6 115 54.8
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 8.7e-09 65.1 90 45.6
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 1.5e-08 64.3 48 64.6
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 4.3e-08 62.8 111 36.0
CBR_g23768 Chara braunii HOM05D006591 ORTHO05D007861 5.6e-08 62.4 102 35.3
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 1.3e-07 61.2 63 55.6
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 1.6e-07 60.8 99 40.4
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 4.8e-07 59.3 89 44.9
Pp3c6_21850 Physcomitrium patens HOM05D006591 ORTHO05D007861 1.8e-06 57.4 76 43.4


User provided reference genes

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