Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0001290 Simmondsia chinensis HOM05D000929 ORTHO05D019423 4.3e-53 211.1 107 100.0
Hund05973 Selenicereus undatus HOM05D000929 ORTHO05D003255 7.6e-42 173.7 107 81.3
Lalb_Chr16g0382371 Lupinus albus HOM05D000929 ORTHO05D003255 6.4e-41 170.6 107 76.6
Ciclev10030683m.g Citrus clementina HOM05D000929 ORTHO05D003255 1.4e-40 169.5 107 78.5
Phvul.002G072600 Phaseolus vulgaris HOM05D000929 ORTHO05D003255 1.4e-40 169.5 107 74.8
Cfa009113 Carpinus fangiana HOM05D000929 ORTHO05D003255 1.9e-40 169.1 107 79.4
Lalb_Chr05g0227871 Lupinus albus HOM05D000929 ORTHO05D003255 3.2e-40 168.3 107 76.6
Duzib268G0481 Durio zibethinus HOM05D000929 ORTHO05D003255 5.4e-40 167.5 107 78.5
Lalb_Chr05g0217021 Lupinus albus HOM05D000929 ORTHO05D003255 9.2e-40 166.8 107 73.8
Manes.05G088300 Manihot esculenta HOM05D000929 ORTHO05D003255 9.2e-40 166.8 107 76.6
Lalb_Chr09g0326431 Lupinus albus HOM05D000929 ORTHO05D003255 1.2e-39 166.4 107 76.6
Sc04g0009010 Simmondsia chinensis HOM05D000929 ORTHO05D003255 2.1e-39 165.6 107 78.5
GSVIVG01020209001 Vitis vinifera HOM05D000929 ORTHO05D003255 2.1e-39 165.6 107 75.7
EL10Ac6g13647 Beta vulgaris HOM05D000929 ORTHO05D003255 2.7e-39 165.2 107 75.7
DCAR_031089 Daucus carota HOM05D000929 ORTHO05D003255 2.7e-39 165.2 107 77.6
TPR.G29172 Trifolium pratense HOM05D000929 ORTHO05D003255 2.7e-39 165.2 107 74.8
Ca_04610_v3 Cicer arietinum L. HOM05D000929 ORTHO05D003255 3.5e-39 164.9 107 74.8
Glyma.02G033300 Glycine max HOM05D000929 ORTHO05D003255 3.5e-39 164.9 107 75.7
arahy.Tifrunner.gnm1.ann1.0K9FD0 Arachis hypogaea HOM05D000929 ORTHO05D003255 4.6e-39 164.5 107 74.8
Oeu039476.1 Olea europaea HOM05D000929 ORTHO05D003255 6.0e-39 164.1 107 73.8
SGA_v2.0_scaffold87G27014 Striga asiatica HOM05D000929 ORTHO05D003255 7.8e-39 163.7 107 75.7
Lj3C1051G4 Lonicera japonica HOM05D000929 ORTHO05D003255 1.0e-38 163.3 107 76.6
Medtr5g034780 Medicago truncatula HOM05D000929 ORTHO05D003255 1.0e-38 163.3 107 74.8
Atru.chr11.1995 Acer truncatum HOM05D000929 ORTHO05D003255 1.3e-38 162.9 107 75.7
Nn4g22838 Nelumbo nucifera HOM05D000929 ORTHO05D003255 1.3e-38 162.9 105 76.2
Aqoxy3G00960 Aquilegia oxysepala HOM05D000929 ORTHO05D003255 1.7e-38 162.5 105 77.1
AL1G37650 Arabidopsis lyrata HOM05D000929 ORTHO05D003255 1.7e-38 162.5 105 75.2
CiPaw.06G073700 Carya illinoinensis HOM05D000929 ORTHO05D003255 1.7e-38 162.5 107 74.8
Glyma.01G032100 Glycine max HOM05D000929 ORTHO05D003255 1.7e-38 162.5 107 74.8
Gohir.D01G132800 Gossypium hirsutum HOM05D000929 ORTHO05D003255 1.7e-38 162.5 107 73.8
arahy.Tifrunner.gnm1.ann1.3RZB0U Arachis hypogaea HOM05D000929 ORTHO05D003255 2.3e-38 162.2 107 73.8
Carub.0001s2339 Capsella rubella HOM05D000929 ORTHO05D003255 2.3e-38 162.2 105 75.2
Gohir.A01G141400 Gossypium hirsutum HOM05D000929 ORTHO05D003255 3.9e-38 161.4 107 73.8
Gorai.005G183900 Gossypium raimondii HOM05D000929 ORTHO05D003255 3.9e-38 161.4 105 76.2
THA.LOC104822131 Tarenaya hassleriana HOM05D000929 ORTHO05D003255 3.9e-38 161.4 105 77.1
Lj6C803G6 Lonicera japonica HOM05D000929 ORTHO05D003255 5.1e-38 161.0 107 74.8
Nitab4.5_0000925g0040 Nicotiana tabacum HOM05D000929 ORTHO05D003255 5.1e-38 161.0 107 74.8
Gohir.D02G163900 Gossypium hirsutum HOM05D000929 ORTHO05D003255 6.6e-38 160.6 105 76.2
Gohir.D12G050500 Gossypium hirsutum HOM05D000929 ORTHO05D003255 6.6e-38 160.6 107 75.7
Gorai.008G053700 Gossypium raimondii HOM05D000929 ORTHO05D003255 6.6e-38 160.6 107 75.7
Prupe.1G256500 Prunus persica HOM05D000929 ORTHO05D003255 6.6e-38 160.6 107 74.8
Gorai.002G164400 Gossypium raimondii HOM05D000929 ORTHO05D003255 8.6e-38 160.2 107 72.9
MD16G1089500 Malus domestica HOM05D000929 ORTHO05D003255 1.1e-37 159.8 107 75.7
TPR.G31964 Trifolium pratense HOM05D000929 ORTHO05D003255 1.1e-37 159.8 107 72.9
TWI36G1374 Tripterygium wilfordii HOM05D000929 ORTHO05D003255 1.1e-37 159.8 105 76.2
Manes.01G198500 Manihot esculenta HOM05D000929 ORTHO05D003255 1.5e-37 159.5 107 72.9
Oeu001748.1 Olea europaea HOM05D000929 ORTHO05D003255 1.9e-37 159.1 107 71.0
Potri.006G092800 Populus trichocarpa HOM05D000929 ORTHO05D003255 1.9e-37 159.1 107 72.0
Sp1g21250 Schrenkiella parvula HOM05D000929 ORTHO05D003255 1.9e-37 159.1 105 77.1
TAR629G2238 Trochodendron aralioides HOM05D000929 ORTHO05D003255 2.5e-37 158.7 101 76.2
Actinidia01711 Actinidia chinensis HOM05D000929 ORTHO05D003255 3.3e-37 158.3 107 74.8
Cc11_g14450 Coffea canephora HOM05D000929 ORTHO05D003255 4.3e-37 157.9 107 73.8
Thhalv10023264m.g Eutrema salsugineum HOM05D000929 ORTHO05D003255 4.3e-37 157.9 105 74.3
Gohir.A03G141000 Gossypium hirsutum HOM05D000929 ORTHO05D003255 4.3e-37 157.9 105 75.2
CSS0022003 Camellia sinensis var. sinensis HOM05D000929 ORTHO05D003255 5.6e-37 157.5 105 75.2
FvH4_4g34830 Fragaria vesca HOM05D000929 ORTHO05D003255 5.6e-37 157.5 105 76.2
FAN17G2555 Fragaria x ananassa HOM05D000929 ORTHO05D003255 5.6e-37 157.5 105 76.2
Nitab4.5_0000031g0020 Nicotiana tabacum HOM05D000929 ORTHO05D003255 5.6e-37 157.5 107 73.8
RcHm_v2.0_Chr4g0444171 Rosa chinensis HOM05D000929 ORTHO05D003255 5.6e-37 157.5 105 76.2
TWI18G0795 Tripterygium wilfordii HOM05D000929 ORTHO05D003255 5.6e-37 157.5 105 76.2
vmacro01188 Vaccinium macrocarpon HOM05D000929 ORTHO05D003255 5.6e-37 157.5 105 75.2
vmacro12520 Vaccinium macrocarpon HOM05D000929 ORTHO05D003255 5.6e-37 157.5 105 75.2
CSS0042322 Camellia sinensis var. sinensis HOM05D000929 ORTHO05D003255 7.3e-37 157.1 105 75.2
Thhalv10006767m.g Eutrema salsugineum HOM05D000929 ORTHO05D003255 7.3e-37 157.1 105 77.1
Glyma.08G289100 Glycine max HOM05D000929 ORTHO05D003255 7.3e-37 157.1 107 70.1
Glyma.18G135351 Glycine max HOM05D000929 ORTHO05D019423 7.3e-37 157.1 106 70.8
Lj2g0010189 Lotus japonicus HOM05D000929 ORTHO05D003255 7.3e-37 157.1 107 73.8
vmacro12522 Vaccinium macrocarpon HOM05D000929 ORTHO05D003255 7.3e-37 157.1 105 75.2
Dinv31017 Davidia involucrata HOM05D000929 ORTHO05D003255 9.6e-37 156.8 107 72.0
Nn3g16925 Nelumbo nucifera HOM05D000929 ORTHO05D003255 1.2e-36 156.4 105 74.3
SalBow8G4564 Salvia bowleyana HOM05D000929 ORTHO05D003255 1.6e-36 156.0 107 71.0
THA.LOC104819479 Tarenaya hassleriana HOM05D000929 ORTHO05D003255 1.6e-36 156.0 107 71.0
TAR371G0396 Trochodendron aralioides HOM05D000929 ORTHO05D003255 1.6e-36 156.0 105 73.3
Carub.0002s0518 Capsella rubella HOM05D000929 ORTHO05D003255 2.1e-36 155.6 105 74.3
Migut.E00152 Erythranthe guttata HOM05D000929 ORTHO05D003255 2.1e-36 155.6 107 72.0
MD13G1089300 Malus domestica HOM05D000929 ORTHO05D003255 2.1e-36 155.6 107 73.8
Rhsim12G0047900 Rhododendron simsii HOM05D000929 ORTHO05D003255 2.1e-36 155.6 105 74.3
AT1G23900 Arabidopsis thaliana HOM05D000929 ORTHO05D003255 2.8e-36 155.2 105 73.3
BcaB07g32366 Brassica carinata HOM05D000929 ORTHO05D003255 2.8e-36 155.2 105 76.2
Potri.016G104700 Populus trichocarpa HOM05D000929 ORTHO05D003255 2.8e-36 155.2 106 72.6
PGSC0003DMG400004116 Solanum tuberosum HOM05D000929 ORTHO05D003255 3.6e-36 154.8 107 71.0
CAN.G205.10 Capsicum annuum HOM05D000929 ORTHO05D003255 4.7e-36 154.5 107 72.0
CARHR052880 Cardamine hirsuta HOM05D000929 ORTHO05D003255 4.7e-36 154.5 105 73.3
DCAR_024137 Daucus carota HOM05D000929 ORTHO05D003255 4.7e-36 154.5 107 71.0
Nitab4.5_0008887g0020 Nicotiana tabacum HOM05D000929 ORTHO05D003255 4.7e-36 154.5 107 71.0
TAR622G1265 Trochodendron aralioides HOM05D000929 ORTHO05D003255 4.7e-36 154.5 105 71.4
HanXRQChr12g0371361 Helianthus annuus HOM05D000929 ORTHO05D003255 6.2e-36 154.1 107 72.0
CiPaw.05G147600 Carya illinoinensis HOM05D000929 ORTHO05D003255 8.1e-36 153.7 105 73.3
Haze_12151 Corylus avellana HOM05D000929 ORTHO05D003255 8.1e-36 153.7 127 65.4
SalBow2G0004 Salvia bowleyana HOM05D000929 ORTHO05D003255 1.1e-35 153.3 107 70.1
SalBow2G3165 Salvia bowleyana HOM05D000929 ORTHO05D003255 1.1e-35 153.3 107 70.1
Solyc05g005780.3 Solanum lycopersicum HOM05D000929 ORTHO05D003255 1.1e-35 153.3 107 70.1
Sopen04g013480 Solanum pennellii HOM05D000929 ORTHO05D003255 1.1e-35 153.3 107 70.1
Sopen05g001780 Solanum pennellii HOM05D000929 ORTHO05D003255 1.1e-35 153.3 107 70.1
BcaB03g14129 Brassica carinata HOM05D000929 ORTHO05D003255 1.4e-35 152.9 105 75.2
BcaC06g35060 Brassica carinata HOM05D000929 ORTHO05D003255 1.4e-35 152.9 105 75.2
A07p13710 Brassica napus HOM05D000929 ORTHO05D003255 1.4e-35 152.9 105 73.3
C07p20170 Brassica napus HOM05D000929 ORTHO05D003255 1.4e-35 152.9 105 74.3
BolC7t42538H Brassica oleracea HOM05D000929 ORTHO05D003255 1.4e-35 152.9 105 74.3
CANSAT01G0657 Cannabis sativa HOM05D000929 ORTHO05D003255 1.4e-35 152.9 105 70.5
ECA234G1358 Erigeron canadensis HOM05D000929 ORTHO05D003255 1.4e-35 152.9 107 72.0
Solyc04g025870.4 Solanum lycopersicum HOM05D000929 ORTHO05D003255 1.4e-35 152.9 107 70.1
A09p40930 Brassica napus HOM05D000929 ORTHO05D003255 1.8e-35 152.5 105 75.2
BraA09t39583Z Brassica rapa HOM05D000929 ORTHO05D003255 1.8e-35 152.5 105 75.2
CsaV3_5G031710 Cucumis sativus L. HOM05D000929 ORTHO05D003255 1.8e-35 152.5 107 70.1
Phvul.003G053300 Phaseolus vulgaris HOM05D000929 ORTHO05D003255 1.8e-35 152.5 107 68.2
C05p23090 Brassica napus HOM05D000929 ORTHO05D003255 2.4e-35 152.1 105 76.2
Peaxi162Scf00421g00122 Petunia axillaris HOM05D000929 ORTHO05D003255 2.4e-35 152.1 107 70.1
AL2G16620 Arabidopsis lyrata HOM05D000929 ORTHO05D003255 3.1e-35 151.8 105 72.4
HanXRQChr17g0570221 Helianthus annuus HOM05D000929 ORTHO05D003255 3.1e-35 151.8 107 71.0
HanXRQChr12g0383371 Helianthus annuus HOM05D000929 ORTHO05D003255 4.0e-35 151.4 107 70.1
BraA07t29122Z Brassica rapa HOM05D000929 ORTHO05D003255 5.2e-35 151.0 105 72.4
Lsat_1_v5_gn_4_7040 Lactuca sativa HOM05D000929 ORTHO05D003255 5.2e-35 151.0 107 69.2
Sabra06G0070500 Salix brachista HOM05D000929 ORTHO05D003255 5.2e-35 151.0 114 67.5
ClCG05G025180 Citrullus lanatus HOM05D000929 ORTHO05D003255 1.2e-34 149.8 107 70.1
SGA_v2.0_scaffold165G38266 Striga asiatica HOM05D000929 ORTHO05D003255 1.2e-34 149.8 104 68.3
Aa31LG2G10170 Aethionema arabicum HOM05D000929 ORTHO05D003255 1.5e-34 149.4 105 70.5
Nitab4.5_0000052g0340 Nicotiana tabacum HOM05D000929 ORTHO05D003255 2.0e-34 149.1 107 70.1
Sed0009259 Sechium edule HOM05D000929 ORTHO05D003255 3.4e-34 148.3 107 69.2
Os06g0167100 Oryza sativa ssp. japonica HOM05D000929 ORTHO05D003255 4.4e-34 147.9 107 69.2
BcaB04g20249 Brassica carinata HOM05D000929 ORTHO05D003255 5.8e-34 147.5 105 67.6
MSTRG.606 Avicennia marina HOM05D000929 ORTHO05D003255 7.6e-34 147.1 107 67.3
Ca_22750_v3 Cicer arietinum L. HOM05D000929 ORTHO05D003255 7.6e-34 147.1 94 77.7
PSO063G4361 Papaver somniferum HOM05D000929 ORTHO05D003255 7.6e-34 147.1 105 70.5
Hund25335 Selenicereus undatus HOM05D000929 ORTHO05D003255 7.6e-34 147.1 88 84.1
Migut.L01430 Erythranthe guttata HOM05D000929 ORTHO05D003255 1.3e-33 146.4 107 68.2
Sp2g04530 Schrenkiella parvula HOM05D000929 ORTHO05D003255 2.2e-33 145.6 105 67.6
Zm00001eb375520 Zea mays HOM05D000929 ORTHO05D003255 2.2e-33 145.6 107 65.4
ECA246G2227 Erigeron canadensis HOM05D000929 ORTHO05D003255 2.9e-33 145.2 107 66.4
Sed0022852 Sechium edule HOM05D000929 ORTHO05D003255 8.4e-33 143.7 108 68.5
PSO832G0605 Papaver somniferum HOM05D000929 ORTHO05D003255 1.4e-32 142.9 105 68.6
Pp3c15_650 Physcomitrium patens HOM05D000929 ORTHO05D003255 3.2e-32 141.7 107 61.7
CDE02G0944 Ceratophyllum demersum HOM05D000929 ORTHO05D003255 5.4e-32 141.0 105 67.6
MELO3C012011.2 Cucumis melo HOM05D000929 ORTHO05D003255 5.4e-32 141.0 98 71.4
Zm00001eb271590 Zea mays HOM05D000929 ORTHO05D003255 5.4e-32 141.0 107 64.5
BolC5t31007H Brassica oleracea HOM05D000929 ORTHO05D003255 7.1e-32 140.6 133 60.9
unitig_22.g6932 Utricularia gibba HOM05D000929 ORTHO05D003255 1.2e-31 139.8 107 62.6
Mapoly0130s0022 Marchantia polymorpha HOM05D000929 ORTHO05D003255 1.6e-31 139.4 105 63.8
AagrBONN_evm.TU.Sc2ySwM_344.3491 Anthoceros agrestis HOM05D000929 ORTHO05D003255 2.7e-31 138.7 107 61.7
Pp3c12_8940 Physcomitrium patens HOM05D000929 ORTHO05D003255 7.8e-31 137.1 107 60.7
Pp3c17_4870 Physcomitrium patens HOM05D000929 ORTHO05D003255 7.8e-31 137.1 107 58.9
Zm00001eb192060 Zea mays HOM05D000929 ORTHO05D003255 1.3e-30 136.3 107 60.7
Dinv24884 Davidia involucrata HOM05D000929 ORTHO05D003255 8.7e-30 133.7 149 53.0
AT1G60070 Arabidopsis thaliana HOM05D000929 ORTHO05D003255 3.3e-29 131.7 141 53.2
ATR1149G054 Amborella trichopoda HOM05D000929 ORTHO05D003255 2.8e-28 128.6 105 62.9
arahy.Tifrunner.gnm1.ann1.MKS3V3 Arachis hypogaea HOM05D000929 ORTHO05D003255 5.3e-27 124.4 107 61.7
PGR119G1498 Punica granatum HOM05D000929 ORTHO05D003255 5.3e-27 124.4 107 60.7
Psat4g127600 Pisum sativum HOM05D000929 ORTHO05D003255 2.0e-26 122.5 107 57.9
SMO347G0230 Selaginella moellendorffii HOM05D000929 ORTHO05D003255 5.8e-26 120.9 107 58.9
CDE01G0215 Ceratophyllum demersum HOM05D000929 ORTHO05D003255 2.2e-25 119.0 99 63.6
Thecc.02G246200 Theobroma cacao HOM05D000929 ORTHO05D003255 2.2e-25 119.0 75 80.0
QL03p061898 Quercus lobata HOM05D000929 ORTHO05D003255 2.9e-25 118.6 77 77.9
COL.COLO4_19524 Corchorus olitorius HOM05D000929 ORTHO05D003255 1.1e-24 116.7 76 76.3
arahy.Tifrunner.gnm1.ann1.095X5J Arachis hypogaea HOM05D000929 ORTHO05D003255 5.4e-24 114.4 100 61.0
Gohir.A12G052100 Gossypium hirsutum HOM05D000929 ORTHO05D003255 5.4e-24 114.4 76 75.0
Medtr8g063690 Medicago truncatula HOM05D000929 ORTHO05D003255 5.4e-24 114.4 75 76.0
EL10Ac6g13782 Beta vulgaris HOM05D000929 ORTHO05D019423 9.3e-24 113.6 75 74.7
Eucgr.B03952 Eucalyptus grandis HOM05D000929 ORTHO05D003255 6.0e-23 110.9 73 74.0
AUR62014001 Chenopodium quinoa HOM05D000929 ORTHO05D003255 7.9e-23 110.5 81 67.9
Gohir.D01G146850 Gossypium hirsutum HOM05D002503 ORTHO05D019423 3.9e-22 108.2 75 68.0
Cpa.g.sc69.3 Carica papaya HOM05D000929 ORTHO05D003255 6.7e-22 107.5 73 72.6
BcaC05g26293 Brassica carinata HOM05D000929 ORTHO05D019423 1.9e-21 105.9 67 80.6
Gorai.002G182800 Gossypium raimondii HOM05D002503 ORTHO05D019423 4.3e-21 104.8 75 66.7
CAN.G1082.6 Capsicum annuum HOM05D000929 ORTHO05D003255 3.7e-20 101.7 75 68.0
CSS0044632 Camellia sinensis var. sinensis HOM05D000929 ORTHO05D003255 1.7e-17 92.8 65 72.3
Duzib251G0010 Durio zibethinus HOM05D000929 ORTHO05D003255 3.8e-17 91.7 107 50.5
Pp3c26_590 Physcomitrium patens HOM05D000929 ORTHO05D003255 6.0e-15 84.3 75 49.3
CBR_g41578 Chara braunii HOM05D000929 ORTHO05D003255 7.9e-15 84.0 75 54.7
PRCOL_00002053 Prasinoderma coloniale HOM05D000929 ORTHO05D003255 1.0e-14 83.6 105 43.8
Cre16.g676650 Chlamydomonas reinhardtii HOM05D000929 ORTHO05D003255 1.3e-14 83.2 108 43.5
MCO03G372 Micromonas commoda HOM05D000929 ORTHO05D003255 5.3e-11 71.2 93 41.9
VMungo0251G3548 Vigna mungo HOM05D000929 ORTHO05D003255 1.1e-08 63.5 41 73.2
Psat2g105480 Pisum sativum HOM05D000929 ORTHO05D003255 1.6e-07 59.7 40 70.0
Lsat_1_v5_gn_2_122021 Lactuca sativa HOM05D006671 ORTHO05D008637 5.1e-06 54.7 34 73.5


User provided reference genes

Program Settings