Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0000970 Simmondsia chinensis HOM05D002002 ORTHO05D008797 0.0e+00 1395.9 852 100.0
Dinv15235 Davidia involucrata HOM05D002002 ORTHO05D008797 2.5e-130 470.7 1012 42.3
EL10Ac6g13807 Beta vulgaris HOM05D002002 ORTHO05D008797 7.3e-130 469.2 856 47.3
AUR62005461 Chenopodium quinoa HOM05D002002 ORTHO05D008797 5.2e-128 463.0 653 48.4
AUR62024280 Chenopodium quinoa HOM05D002002 ORTHO05D008797 3.8e-126 456.8 669 47.2
Dinv24786 Davidia involucrata HOM05D002002 ORTHO05D008797 2.4e-117 427.6 995 41.5
GSVIVG01005756001 Vitis vinifera HOM05D002002 ORTHO05D008797 2.3e-107 394.4 577 46.8
Duzib251G0042 Durio zibethinus HOM05D002002 ORTHO05D008797 3.4e-103 380.6 927 41.3
Manes.13G024600 Manihot esculenta HOM05D002002 ORTHO05D008797 3.8e-102 377.1 899 39.3
Gohir.D04G179800 Gossypium hirsutum HOM05D002002 ORTHO05D008797 4.9e-102 376.7 912 40.8
Gorai.012G173000 Gossypium raimondii HOM05D002002 ORTHO05D008797 1.4e-101 375.2 912 40.8
Cpa.g.sc33.18 Carica papaya HOM05D002002 ORTHO05D008797 3.2e-101 374.0 719 41.4
Actinidia15094 Actinidia chinensis HOM05D002002 ORTHO05D008797 4.2e-101 373.6 975 42.1
Hund25388 Selenicereus undatus HOM05D002002 ORTHO05D008797 2.1e-100 371.3 951 38.1
Atru.chr11.2102 Acer truncatum HOM05D002002 ORTHO05D008797 8.7e-99 365.9 889 37.9
Potri.010G046000 Populus trichocarpa HOM05D002002 ORTHO05D008797 1.1e-96 359.0 905 37.8
QL03p058108 Quercus lobata HOM05D002002 ORTHO05D008797 1.1e-96 359.0 699 40.5
TAR374G0715 Trochodendron aralioides HOM05D002002 ORTHO05D008797 6.5e-94 349.7 918 43.5
MD16G1102300 Malus domestica HOM05D002002 ORTHO05D008797 8.4e-94 349.4 861 39.1
Thecc.02G259600 Theobroma cacao HOM05D002002 ORTHO05D008797 1.4e-93 348.6 728 41.2
Gohir.A04G136700 Gossypium hirsutum HOM05D002002 ORTHO05D008797 7.2e-93 346.3 711 39.2
Cfa009210 Carpinus fangiana HOM05D002002 ORTHO05D008797 1.6e-92 345.1 988 37.9
Duzib248G0209 Durio zibethinus HOM05D002002 ORTHO05D008797 2.7e-92 344.4 1007 36.0
CiPaw.05G182600 Carya illinoinensis HOM05D002002 ORTHO05D008797 7.9e-92 342.8 622 43.1
Lalb_Chr16g0392181 Lupinus albus HOM05D002002 ORTHO05D008797 2.3e-91 341.3 951 38.1
CsaV3_5G031140 Cucumis sativus L. HOM05D002002 ORTHO05D008797 1.9e-90 338.2 995 36.5
ECA233G4520 Erigeron canadensis HOM05D002002 ORTHO05D008797 1.6e-89 335.1 876 37.7
Haze_12247 Corylus avellana HOM05D002002 ORTHO05D008711 6.3e-89 333.2 763 37.6
MD13G1101700 Malus domestica HOM05D002002 ORTHO05D008797 1.8e-88 331.6 790 40.3
Ciclev10030634m.g Citrus clementina HOM05D002002 ORTHO05D008797 9.0e-88 329.3 868 35.4
MELO3C011952.2 Cucumis melo HOM05D002002 ORTHO05D008711 2.6e-87 327.8 917 34.6
Nitab4.5_0000007g0090 Nicotiana tabacum HOM05D002002 ORTHO05D008797 3.4e-87 327.4 908 37.8
DCAR_031153 Daucus carota HOM05D002002 ORTHO05D008797 6.5e-86 323.2 687 42.8
Migut.K00597 Erythranthe guttata HOM05D002002 ORTHO05D008797 1.4e-85 322.0 939 36.8
CSS0037172 Camellia sinensis var. sinensis HOM05D002002 ORTHO05D008797 1.9e-85 321.6 1068 40.4
Sabra08G0141500 Salix brachista HOM05D002002 ORTHO05D008797 2.5e-85 321.2 877 37.3
ClCG05G025730 Citrullus lanatus HOM05D002002 ORTHO05D008797 2.7e-84 317.8 746 38.1
RcHm_v2.0_Chr4g0432951 Rosa chinensis HOM05D002002 ORTHO05D008797 6.1e-84 316.6 669 41.0
CANSAT01G0132 Cannabis sativa HOM05D002002 ORTHO05D008797 1.3e-81 308.9 887 43.5
Nitab4.5_0009240g0010 Nicotiana tabacum HOM05D002002 ORTHO05D008797 1.7e-81 308.5 680 39.7
vmacro16196 Vaccinium macrocarpon HOM05D002002 ORTHO05D008797 4.1e-80 303.9 610 41.0
Phvul.003G065200 Phaseolus vulgaris HOM05D002002 ORTHO05D008797 9.1e-80 302.8 968 35.6
Potri.008G186900 Populus trichocarpa HOM05D002002 ORTHO05D008797 5.9e-79 300.1 896 38.5
Eucgr.H02500 Eucalyptus grandis HOM05D002002 ORTHO05D008797 7.7e-79 299.7 916 36.1
Sed0005394 Sechium edule HOM05D002002 ORTHO05D008797 1.7e-78 298.5 629 39.4
Lj4g0017193 Lotus japonicus HOM05D002002 ORTHO05D008797 1.4e-77 295.4 886 38.5
SGA_v2.0_scaffold476G52131 Striga asiatica HOM05D002002 ORTHO05D008797 2.5e-77 294.7 585 41.5
Oeu059906.4 Olea europaea HOM05D002002 ORTHO05D008797 7.9e-76 289.7 608 40.5
Lalb_Chr05g0228431 Lupinus albus HOM05D002002 ORTHO05D008797 1.4e-75 288.9 716 37.4
Ca_22584_v3 Cicer arietinum L. HOM05D002002 ORTHO05D008711 1.5e-74 285.4 636 38.5
Glyma.18G143900 Glycine max HOM05D002002 ORTHO05D008797 1.1e-72 279.3 933 33.9
Psat4g115320 Pisum sativum HOM05D002002 ORTHO05D008797 1.1e-72 279.3 720 36.4
Aqoxy3G01206 Aquilegia oxysepala HOM05D002002 ORTHO05D008797 2.4e-72 278.1 998 32.6
ATR0824G114 Amborella trichopoda HOM05D002002 ORTHO05D008797 5.3e-72 276.9 571 41.2
PGR119G0425 Punica granatum HOM05D002002 ORTHO05D008797 5.3e-72 276.9 875 34.4
TWI75G1475 Tripterygium wilfordii HOM05D002002 ORTHO05D008797 5.3e-72 276.9 929 36.8
PSO017G3282 Papaver somniferum HOM05D002002 ORTHO05D008797 9.1e-72 276.2 896 34.4
arahy.Tifrunner.gnm1.ann1.PHTA8N Arachis hypogaea HOM05D002002 ORTHO05D008711 1.2e-71 275.8 675 38.5
CAN.G832.3 Capsicum annuum HOM05D002002 ORTHO05D008797 1.2e-71 275.8 650 39.7
FAN17G1038 Fragaria x ananassa HOM05D002002 ORTHO05D008711 2.0e-71 275.0 844 36.0
FvH4_4g25541 Fragaria vesca HOM05D002002 ORTHO05D008797 7.7e-71 273.1 847 39.6
Peaxi162Scf00128g00134 Petunia axillaris HOM05D002002 ORTHO05D008797 1.7e-70 271.9 910 38.0
HanXRQChr08g0208141 Helianthus annuus HOM05D002002 ORTHO05D008797 8.5e-70 269.6 848 39.5
Sopen05g008360 Solanum pennellii HOM05D002002 ORTHO05D008797 3.2e-69 267.7 733 37.4
arahy.Tifrunner.gnm1.ann1.YSSX7I Arachis hypogaea HOM05D002002 ORTHO05D008797 7.2e-69 266.5 589 40.2
Nn3g16709 Nelumbo nucifera HOM05D002002 ORTHO05D008797 1.2e-68 265.8 1031 33.7
Rhsim12G0110400 Rhododendron simsii HOM05D002002 ORTHO05D008797 8.0e-68 263.1 410 46.3
Nn4g22624 Nelumbo nucifera HOM05D002002 ORTHO05D008797 8.8e-67 259.6 694 36.7
Lsat_1_v5_gn_8_152141 Lactuca sativa HOM05D002002 ORTHO05D008711 9.7e-66 256.1 884 36.5
PSO478G2109 Papaver somniferum HOM05D002002 ORTHO05D008797 6.3e-65 253.4 637 36.4
SalBow2G1965 Salvia bowleyana HOM05D002002 ORTHO05D008797 1.1e-64 252.7 871 36.9
Oeu029877.3 Olea europaea HOM05D002002 ORTHO05D008797 1.2e-63 249.2 585 40.2
AL2G30050 Arabidopsis lyrata HOM05D002002 ORTHO05D008797 2.7e-63 248.1 697 34.4
Glyma.08G282400 Glycine max HOM05D002002 ORTHO05D008797 7.7e-63 246.5 931 36.3
DCAR_007056 Daucus carota HOM05D002002 ORTHO05D008797 1.0e-62 246.1 700 36.1
TPR.G17755 Trifolium pratense HOM05D002002 ORTHO05D008711 1.5e-61 242.3 542 39.9
Prupe.1G244100 Prunus persica HOM05D002002 ORTHO05D008797 3.2e-61 241.1 732 40.6
COL.COLO4_24277 Corchorus olitorius HOM05D002002 ORTHO05D008797 1.6e-60 238.8 513 40.9
Aa31LG4G10340 Aethionema arabicum HOM05D002002 ORTHO05D008711 4.7e-60 237.3 944 35.2
CARHR063850 Cardamine hirsuta HOM05D002002 ORTHO05D008797 2.3e-59 235.0 707 35.8
FAN22G2309 Fragaria x ananassa HOM05D002002 ORTHO05D008797 4.4e-58 230.7 497 39.8
Cc11_g15720 Coffea canephora HOM05D002002 ORTHO05D008797 1.2e-55 222.6 879 33.6
TAR622G0079 Trochodendron aralioides HOM05D002002 ORTHO05D008797 3.0e-51 208.0 864 35.8
Sp5g25780 Schrenkiella parvula HOM05D002002 ORTHO05D008797 3.7e-49 201.1 915 31.8
SGA_v2.0_scaffold98G29360 Striga asiatica HOM05D002002 ORTHO05D008797 3.5e-47 194.5 466 36.3
SEGI_21221 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 2.9e-46 191.4 704 30.7
HPP92_005414 Vanilla planifolia HOM05D002002 ORTHO05D008797 4.3e-45 187.6 950 31.2
Os04g0661700 Oryza sativa ssp. japonica HOM05D002002 ORTHO05D008797 1.2e-44 186.0 881 31.8
Thhalv10018098m.g Eutrema salsugineum HOM05D002002 ORTHO05D008797 5.7e-42 177.2 942 31.4
CDE07G1782 Ceratophyllum demersum HOM05D002002 ORTHO05D008797 8.3e-41 173.3 681 33.8
unitig_26.g10348 Utricularia gibba HOM05D002002 ORTHO05D008797 3.0e-38 164.9 870 28.6
SEGI_37990 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 6.6e-38 163.7 654 30.4
TPR.G3029 Trifolium pratense HOM05D002002 ORTHO05D008797 4.4e-34 151.0 381 35.2
AT1G70620 Arabidopsis thaliana HOM05D002002 ORTHO05D008797 7.5e-34 150.2 396 34.3
A02p16740 Brassica napus HOM05D002002 ORTHO05D008797 1.3e-30 139.4 927 28.6
Carub.0002s1735 Capsella rubella HOM05D002002 ORTHO05D008797 6.6e-30 137.1 677 31.8
BraA02t06728Z Brassica rapa HOM05D002002 ORTHO05D008797 1.2e-28 132.9 950 28.4
Lj6A812T43 Lonicera japonica HOM05D002002 ORTHO05D008797 2.1e-28 132.1 338 34.9
Zm00001eb067460 Zea mays HOM05D002002 ORTHO05D008797 1.3e-25 122.9 532 28.9
C02p28000 Brassica napus HOM05D002002 ORTHO05D008797 2.9e-25 121.7 592 29.7
TPR.G3025 Trifolium pratense HOM05D002002 ORTHO05D008797 2.4e-24 118.6 258 37.2
BcaC03g15213 Brassica carinata HOM05D002002 ORTHO05D008797 3.5e-23 114.8 824 32.8
BolC2t08843H Brassica oleracea HOM05D002002 ORTHO05D008797 6.0e-23 114.0 906 31.8
Mapoly0026s0020 Marchantia polymorpha HOM05D002002 ORTHO05D008797 9.5e-21 106.7 283 38.2
Sed0026296 Sechium edule HOM05D002002 ORTHO05D008797 9.5e-21 106.7 469 31.6
unitig_26.g10410 Utricularia gibba HOM05D002002 ORTHO05D008797 4.0e-19 101.3 183 43.2
BcaB05g24599 Brassica carinata HOM05D002002 ORTHO05D008797 2.9e-17 95.1 886 26.6
Pp3c22_14720 Physcomitrium patens HOM05D002002 ORTHO05D008797 1.6e-15 89.4 731 25.7
GSVIVG01005755001 Vitis vinifera HOM05D002002 ORTHO05D008797 6.0e-15 87.4 64 75.0
Solyc05g013490.4 Solanum lycopersicum HOM05D002002 ORTHO05D008797 6.6e-14 84.0 244 32.0
TPR.G2569 Trifolium pratense HOM05D002002 ORTHO05D008797 3.6e-12 78.2 144 39.6
TPR.G3084 Trifolium pratense HOM05D002002 ORTHO05D012248 2.1e-07 62.4 97 44.3
TPR.G1066 Trifolium pratense HOM05D002002 ORTHO05D008797 6.0e-07 60.8 133 36.8


User provided reference genes

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