Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0000930 Simmondsia chinensis HOM05D006816 ORTHO05D008666 3.7e-242 841.3 466 100.0
Ah.02g130220 Amaranthus hybridus HOM05D006816 ORTHO05D008666 3.5e-160 568.9 458 66.6
Hund06034 Selenicereus undatus HOM05D006816 ORTHO05D008666 1.3e-159 567.0 460 65.0
AUR62024254 Chenopodium quinoa HOM05D006816 ORTHO05D008666 2.2e-154 549.7 498 61.6
EL10Ac6g13857 Beta vulgaris HOM05D006816 ORTHO05D008666 3.0e-151 539.3 459 64.1
TAR622G0126 Trochodendron aralioides HOM05D006816 ORTHO05D008666 2.1e-149 533.1 464 63.8
GSVIVG01000542001 Vitis vinifera HOM05D006816 ORTHO05D008666 3.1e-148 529.3 457 63.2
Lj3C1059T10 Lonicera japonica HOM05D006816 ORTHO05D008666 6.9e-148 528.1 457 62.4
Cpa.g.sc33.36 Carica papaya HOM05D006816 ORTHO05D008666 4.2e-145 518.8 473 60.7
Ciclev10030964m.g Citrus clementina HOM05D006816 ORTHO05D008666 1.3e-143 513.8 466 61.4
Dinv15216 Davidia involucrata HOM05D006816 ORTHO05D008666 3.9e-143 512.3 466 62.2
Gohir.D02G158100 Gossypium hirsutum HOM05D006816 ORTHO05D008666 8.7e-143 511.1 465 63.9
Gorai.005G177300 Gossypium raimondii HOM05D006816 ORTHO05D008666 8.7e-143 511.1 465 63.9
CSS0008455 Camellia sinensis var. sinensis HOM05D006816 ORTHO05D008666 6.2e-141 505.0 456 66.0
Nn4g22582 Nelumbo nucifera HOM05D006816 ORTHO05D008666 1.1e-140 504.2 471 66.5
Gohir.A03G133700 Gossypium hirsutum HOM05D006816 ORTHO05D008666 1.8e-140 503.4 465 61.1
TWI36G0164 Tripterygium wilfordii HOM05D006816 ORTHO05D008666 5.3e-140 501.9 463 59.6
COL.COLO4_23463 Corchorus olitorius HOM05D006816 ORTHO05D008666 1.2e-139 500.7 495 60.4
Atru.chr11.2152 Acer truncatum HOM05D006816 ORTHO05D008666 2.0e-139 500.0 464 64.2
FvH4_4g25720 Fragaria vesca HOM05D006816 ORTHO05D008666 4.9e-138 495.4 474 65.4
AUR62005487 Chenopodium quinoa HOM05D006816 ORTHO05D008666 6.5e-138 495.0 536 54.1
QL03p057598 Quercus lobata HOM05D006816 ORTHO05D008666 8.4e-138 494.6 473 60.0
PGSC0003DMG400018598 Solanum tuberosum HOM05D006816 ORTHO05D008666 8.4e-138 494.6 471 58.0
Eucgr.H02486 Eucalyptus grandis HOM05D006816 ORTHO05D008666 1.9e-137 493.4 495 58.0
FAN17G1412 Fragaria x ananassa HOM05D006816 ORTHO05D008666 3.2e-137 492.7 474 59.5
CAN.G436.5 Capsicum annuum HOM05D006816 ORTHO05D008666 4.2e-137 492.3 455 58.9
Lsat_1_v5_gn_4_4020 Lactuca sativa HOM05D006816 ORTHO05D008666 9.3e-137 491.1 473 60.7
Nitab4.5_0006963g0030 Nicotiana tabacum HOM05D006816 ORTHO05D008666 2.1e-136 490.0 456 59.9
HanXRQChr17g0569531 Helianthus annuus HOM05D006816 ORTHO05D008666 2.7e-136 489.6 471 58.8
Sopen05g008580 Solanum pennellii HOM05D006816 ORTHO05D008666 3.5e-136 489.2 470 57.2
vmacro01121 Vaccinium macrocarpon HOM05D006816 ORTHO05D008666 3.5e-136 489.2 456 59.4
PGR119G0117 Punica granatum HOM05D006816 ORTHO05D008666 7.9e-136 488.0 459 66.0
Solyc05g013670.3 Solanum lycopersicum HOM05D006816 ORTHO05D008666 3.9e-135 485.7 470 56.8
MD13G1099700 Malus domestica HOM05D006816 ORTHO05D008666 6.7e-135 485.0 472 58.1
CANSAT01G2021 Cannabis sativa HOM05D006816 ORTHO05D008666 1.9e-134 483.4 456 67.1
ECA234G3219 Erigeron canadensis HOM05D006816 ORTHO05D008666 1.9e-134 483.4 472 56.1
Aqoxy5G03738 Aquilegia oxysepala HOM05D006816 ORTHO05D008666 3.3e-134 482.6 466 58.2
AL2G26590 Arabidopsis lyrata HOM05D006816 ORTHO05D008666 5.7e-134 481.9 473 58.1
Thhalv10018280m.g Eutrema salsugineum HOM05D006816 ORTHO05D008666 5.7e-134 481.9 463 58.3
PSO063G6228 Papaver somniferum HOM05D006816 ORTHO05D008666 5.7e-134 481.9 479 57.6
AT1G67840 Arabidopsis thaliana HOM05D006816 ORTHO05D008666 7.4e-134 481.5 471 57.5
FAN22G0176 Fragaria x ananassa HOM05D006816 ORTHO05D008666 7.4e-134 481.5 474 58.2
FAN12G1622 Fragaria x ananassa HOM05D006816 ORTHO05D008666 9.6e-134 481.1 474 63.5
Migut.K00611 Erythranthe guttata HOM05D006816 ORTHO05D008666 1.6e-133 480.3 464 56.7
Sp5g22850 Schrenkiella parvula HOM05D006816 ORTHO05D008666 1.6e-133 480.3 474 57.4
RcHm_v2.0_Chr4g0433151 Rosa chinensis HOM05D006816 ORTHO05D008666 2.8e-133 479.6 471 65.6
Sabra10G0021100 Salix brachista HOM05D006816 ORTHO05D008666 6.2e-133 478.4 462 64.7
Haze_12261 Corylus avellana HOM05D006816 ORTHO05D008666 8.2e-133 478.0 537 53.4
THA.LOC104825556 Tarenaya hassleriana HOM05D006816 ORTHO05D008666 8.2e-133 478.0 467 57.2
BcaB03g15378 Brassica carinata HOM05D006816 ORTHO05D008666 1.4e-132 477.2 468 58.5
Carub.0002s1430 Capsella rubella HOM05D006816 ORTHO05D008666 4.1e-132 475.7 463 58.1
PSO754G0080 Papaver somniferum HOM05D006816 ORTHO05D008666 4.1e-132 475.7 479 57.0
C06p38240 Brassica napus HOM05D006816 ORTHO05D008666 5.3e-132 475.3 466 58.2
Lalb_Chr07g0185401 Lupinus albus HOM05D006816 ORTHO05D008666 9.0e-132 474.6 471 56.7
Glyma.05G174600 Glycine max HOM05D006816 ORTHO05D008666 1.5e-131 473.8 468 56.8
BcaC08g46032 Brassica carinata HOM05D006816 ORTHO05D008666 5.8e-131 471.9 468 57.9
Aa31sc755G30 Aethionema arabicum HOM05D006816 ORTHO05D008666 7.6e-131 471.5 467 57.6
CARHR060480 Cardamine hirsuta HOM05D006816 ORTHO05D008666 7.6e-131 471.5 473 56.0
Manes.13G022900 Manihot esculenta HOM05D006816 ORTHO05D008666 7.6e-131 471.5 464 58.0
Peaxi162Scf00128g00318 Petunia axillaris HOM05D006816 ORTHO05D008666 2.2e-130 469.9 455 58.2
Oeu057544.1 Olea europaea HOM05D006816 ORTHO05D008666 2.9e-130 469.5 457 56.9
BolC6t38923H Brassica oleracea HOM05D006816 ORTHO05D008666 3.8e-130 469.2 468 57.1
VMungo0251G0196 Vigna mungo HOM05D006816 ORTHO05D008666 8.4e-130 468.0 469 56.7
Phvul.002G259600 Phaseolus vulgaris HOM05D006816 ORTHO05D008666 4.2e-129 465.7 473 55.8
A07p32350 Brassica napus HOM05D006816 ORTHO05D008666 7.2e-129 464.9 468 57.1
BraA07t30858Z Brassica rapa HOM05D006816 ORTHO05D008666 7.2e-129 464.9 468 57.1
Duzib251G0886 Durio zibethinus HOM05D006816 ORTHO05D008666 7.2e-129 464.9 461 65.9
Sed0004203 Sechium edule HOM05D006816 ORTHO05D008666 7.9e-128 461.5 471 54.1
SalBow2G0630 Salvia bowleyana HOM05D006816 ORTHO05D008666 3.0e-127 459.5 482 54.4
CsaV3_5G031010 Cucumis sativus L. HOM05D006816 ORTHO05D008666 1.9e-126 456.8 461 54.9
Ca_17778_v3 Cicer arietinum L. HOM05D006816 ORTHO05D008666 7.4e-126 454.9 470 54.9
Medtr8g089810 Medicago truncatula HOM05D006816 ORTHO05D008666 7.4e-126 454.9 470 54.0
MELO3C011940.2 Cucumis melo HOM05D006816 ORTHO05D008666 9.7e-126 454.5 469 54.6
Lj4g0008868 Lotus japonicus HOM05D006816 ORTHO05D008666 1.3e-125 454.1 469 54.4
Cc11_g15850 Coffea canephora HOM05D006816 ORTHO05D008666 6.9e-124 448.4 471 56.1
TPR.G6183 Trifolium pratense HOM05D006816 ORTHO05D008666 2.6e-123 446.4 470 53.0
Psat7g059360 Pisum sativum HOM05D006816 ORTHO05D008666 3.0e-119 433.0 471 52.7
unitig_699.g19932 Utricularia gibba HOM05D006816 ORTHO05D008666 8.8e-119 431.4 467 52.7
ClCG05G025840 Citrullus lanatus HOM05D006816 ORTHO05D008666 8.2e-117 424.9 469 53.1
ATR0824G245 Amborella trichopoda HOM05D006816 ORTHO05D008666 3.6e-112 409.5 475 50.7
SGA_v2.0_scaffold100G29566 Striga asiatica HOM05D006816 ORTHO05D008666 1.1e-105 387.9 551 49.5
DCAR_031163 Daucus carota HOM05D006816 ORTHO05D008666 4.7e-104 382.5 456 51.3
Zm00001eb319330 Zea mays HOM05D006816 ORTHO05D008666 8.8e-103 378.3 469 50.5
Nitab4.5_0000524g0100 Nicotiana tabacum HOM05D006816 ORTHO05D008666 3.7e-101 372.9 385 55.8
Actinidia01356 Actinidia chinensis HOM05D006816 ORTHO05D008666 2.4e-100 370.2 395 55.7
SEGI_18687 Sequoiadendron giganteum HOM05D006816 ORTHO05D008666 3.7e-85 319.7 461 42.7
HPP92_023364 Vanilla planifolia HOM05D006816 ORTHO05D008666 1.2e-83 314.7 321 54.8
Thecc.02G261900 Theobroma cacao HOM05D006816 ORTHO05D008666 3.5e-83 313.2 306 61.4
Potri.010G047500 Populus trichocarpa HOM05D006816 ORTHO05D008666 4.7e-80 302.8 300 60.0
arahy.Tifrunner.gnm1.ann1.2HFS1Z Arachis hypogaea HOM05D006816 ORTHO05D008666 8.6e-74 282.0 301 55.5
arahy.Tifrunner.gnm1.ann1.CH9KSW Arachis hypogaea HOM05D006816 ORTHO05D008666 5.6e-73 279.3 301 54.5
CiPaw.05G180700 Carya illinoinensis HOM05D006816 ORTHO05D008666 2.3e-71 273.9 250 62.0
FAN07G2231 Fragaria x ananassa HOM05D006816 ORTHO05D008666 5.2e-71 272.7 311 55.6
Prupe.1G246300 Prunus persica HOM05D006816 ORTHO05D008666 3.3e-65 253.4 308 52.3
Os12g0292900 Oryza sativa ssp. japonica HOM05D006816 ORTHO05D008666 7.8e-59 232.3 302 50.0
Mapoly0088s0066 Marchantia polymorpha HOM05D006816 ORTHO05D008666 2.4e-52 210.7 450 35.3
CDE02G3152 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 8.4e-45 185.7 341 38.7
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 5.1e-34 149.8 122 62.3
Psat3g153200 Pisum sativum HOM05D006816 ORTHO05D008666 2.5e-33 147.5 133 60.2
Glyma.08G131850 Glycine max HOM05D006816 ORTHO05D008666 2.1e-32 144.4 177 48.6
MBI17_g43191_MAGBIO Magnolia biondii HOM05D006816 ORTHO05D008666 6.2e-32 142.9 166 52.4
Pp3c11_24610 Physcomitrium patens HOM05D006816 ORTHO05D008666 4.0e-31 140.2 456 29.4
Psat2g121560 Pisum sativum HOM05D006816 ORTHO05D008666 5.5e-28 129.8 116 60.3
Psat4g077560 Pisum sativum HOM05D006816 ORTHO05D008666 9.3e-28 129.0 96 68.8
CDE09G0157 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 3.8e-21 107.1 165 39.4
CBR_g52389 Chara braunii HOM05D006816 ORTHO05D008666 7.9e-19 99.4 234 28.6
Actinidia01355 Actinidia chinensis HOM05D006816 ORTHO05D008666 8.7e-18 95.9 59 74.6
COL.COLO4_35805 Corchorus olitorius HOM05D006816 ORTHO05D008666 8.7e-10 69.3 59 57.6


User provided reference genes

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