Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 7.6e-180 633.6 303 100.0
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 3.0e-128 462.2 293 73.0
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 4.4e-127 458.4 284 71.8
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 4.4e-127 458.4 293 72.0
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 1.7e-126 456.4 300 71.7
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 2.8e-126 455.7 282 72.7
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 8.2e-126 454.1 284 72.2
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 2.4e-125 452.6 283 72.8
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 5.3e-125 451.4 290 70.3
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 6.9e-125 451.1 283 72.4
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 6.9e-125 451.1 281 72.2
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 1.5e-124 449.9 294 70.7
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 2.6e-124 449.1 288 70.5
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 3.4e-124 448.7 283 71.7
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 4.5e-124 448.4 283 71.7
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 4.5e-124 448.4 282 73.0
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 1.7e-123 446.4 294 70.4
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 1.7e-123 446.4 283 70.7
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 1.7e-123 446.4 292 68.8
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 1.7e-123 446.4 290 69.7
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 2.2e-123 446.0 281 71.5
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 3.8e-123 445.3 283 72.1
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 5.0e-123 444.9 281 71.5
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 6.5e-123 444.5 281 71.2
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 6.5e-123 444.5 282 70.9
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 6.5e-123 444.5 282 72.3
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 6.5e-123 444.5 282 72.3
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 8.5e-123 444.1 282 70.9
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 8.5e-123 444.1 283 70.3
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 1.1e-122 443.7 284 71.1
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 1.1e-122 443.7 282 72.3
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 2.5e-122 442.6 296 69.3
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 4.2e-122 441.8 282 70.9
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 7.2e-122 441.0 292 67.8
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 2.1e-121 439.5 282 70.6
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 2.1e-121 439.5 281 71.5
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 2.7e-121 439.1 281 70.8
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 2.7e-121 439.1 293 67.2
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 4.7e-121 438.3 283 70.3
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 5.2e-120 434.9 294 66.3
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 5.2e-120 434.9 293 66.6
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 2.6e-119 432.6 299 66.2
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 1.3e-118 430.3 290 68.3
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 1.7e-118 429.9 292 66.1
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 1.7e-118 429.9 288 67.4
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 3.7e-118 428.7 292 67.1
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 1.1e-117 427.2 290 66.6
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 2.4e-117 426.0 283 68.6
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 5.3e-117 424.9 291 66.3
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 7.0e-117 424.5 280 67.5
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 9.1e-117 424.1 286 68.5
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 9.1e-117 424.1 291 65.6
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 1.6e-116 423.3 280 68.2
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 1.6e-116 423.3 283 68.9
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 3.5e-116 422.2 287 67.6
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 7.7e-116 421.0 286 67.8
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 7.7e-116 421.0 280 68.9
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 7.7e-116 421.0 293 65.5
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 2.2e-115 419.5 283 67.8
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 2.2e-115 419.5 282 68.1
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 2.9e-115 419.1 286 68.2
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 2.9e-115 419.1 286 67.1
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 5.0e-115 418.3 295 66.4
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 1.9e-114 416.4 280 67.9
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 4.2e-114 415.2 298 64.8
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 5.5e-114 414.8 279 67.0
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 5.5e-114 414.8 279 67.0
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 5.5e-114 414.8 298 64.8
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 7.2e-114 414.5 298 65.1
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 1.2e-113 413.7 286 65.7
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 2.1e-113 412.9 291 64.9
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 2.3e-112 409.5 266 69.2
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 2.3e-112 409.5 299 64.5
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 2.3e-112 409.5 299 64.9
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 4.0e-112 408.7 282 64.5
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 6.7e-112 407.9 299 64.2
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 1.2e-111 407.1 281 64.1
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 2.0e-111 406.4 297 65.0
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 3.7e-110 402.1 299 63.5
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 8.2e-110 401.0 314 61.5
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 9.1e-109 397.5 282 68.1
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 3.8e-107 392.1 286 62.6
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 5.5e-106 388.3 254 69.3
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 3.6e-105 385.6 236 72.5
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 2.8e-102 375.9 251 67.3
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 2.0e-100 369.8 282 60.3
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 4.5e-100 368.6 240 70.0
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 3.8e-99 365.5 295 55.9
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 3.8e-99 365.5 280 62.1
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 4.2e-98 362.1 297 60.6
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 1.2e-97 360.5 240 68.8
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 2.0e-95 353.2 242 65.3
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 8.3e-94 347.8 282 56.0
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 2.3e-91 339.7 281 56.2
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 1.8e-88 330.1 278 55.0
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 9.8e-87 324.3 211 69.7
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 7.5e-79 298.1 195 67.7
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 9.9e-71 271.2 304 47.7
MSTRG.476 Avicennia marina HOM05D006978 ORTHO05D008723 5.2e-64 248.8 152 71.7
Cpa.g.sc99.56 Carica papaya HOM05D006978 ORTHO05D008723 3.3e-50 203.0 139 66.9
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 2.9e-46 189.9 108 75.0
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 3.2e-45 186.4 115 67.8
PRCOL_00001136 Prasinoderma coloniale HOM05D006978 ORTHO05D008723 1.9e-42 177.2 283 37.8
Hma1.2p1_0065F.1_g034970 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 2.1e-41 173.7 113 69.9
SalBow2G1646 Salvia bowleyana HOM05D006978 ORTHO05D008723 4.8e-41 172.6 105 75.2
MBI11_g38269_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.5e-31 141.0 108 61.1
Actinidia34017 Actinidia chinensis HOM05D006978 ORTHO05D008723 2.1e-28 130.6 155 45.2
Rhsim12G0096200 Rhododendron simsii HOM05D006978 ORTHO05D008723 7.9e-28 128.6 111 55.0
arahy.Tifrunner.gnm1.ann1.5L80US Arachis hypogaea HOM05D006978 ORTHO05D008723 4.5e-23 112.8 85 62.4
Cpa.g.sc99.55 Carica papaya HOM05D006978 ORTHO05D008723 8.8e-19 98.6 139 41.0
arahy.Tifrunner.gnm1.ann1.0RBU3Z Arachis hypogaea HOM05D006978 ORTHO05D008723 9.4e-13 78.6 53 62.3
Peaxi162Scf00255g00026 Petunia axillaris HOM05D006978 ORTHO05D008723 4.7e-12 76.3 50 64.0
RcHm_v2.0_Chr2g0135531 Rosa chinensis HOM05D006978 ORTHO05D008723 7.4e-10 68.9 40 70.0
MBI11_g31938_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 4.1e-08 63.2 46 60.9
MBI11_g31937_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 3.4e-07 60.1 42 61.9


User provided reference genes

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